GO Enrichment Analysis of Co-expressed Genes with
AT1G49650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 2.57E-06 |
| 3 | GO:0048829: root cap development | 9.27E-06 |
| 4 | GO:0003333: amino acid transmembrane transport | 3.48E-05 |
| 5 | GO:0001736: establishment of planar polarity | 4.61E-05 |
| 6 | GO:0090391: granum assembly | 8.18E-05 |
| 7 | GO:0015675: nickel cation transport | 8.18E-05 |
| 8 | GO:0010027: thylakoid membrane organization | 1.20E-04 |
| 9 | GO:0010239: chloroplast mRNA processing | 1.23E-04 |
| 10 | GO:0006865: amino acid transport | 1.97E-04 |
| 11 | GO:0010236: plastoquinone biosynthetic process | 2.19E-04 |
| 12 | GO:0009913: epidermal cell differentiation | 2.72E-04 |
| 13 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.72E-04 |
| 14 | GO:0010189: vitamin E biosynthetic process | 3.27E-04 |
| 15 | GO:1901259: chloroplast rRNA processing | 3.27E-04 |
| 16 | GO:0009395: phospholipid catabolic process | 3.84E-04 |
| 17 | GO:0010196: nonphotochemical quenching | 3.84E-04 |
| 18 | GO:0006605: protein targeting | 4.43E-04 |
| 19 | GO:0048564: photosystem I assembly | 4.43E-04 |
| 20 | GO:0045292: mRNA cis splicing, via spliceosome | 4.43E-04 |
| 21 | GO:0006353: DNA-templated transcription, termination | 4.43E-04 |
| 22 | GO:0022900: electron transport chain | 5.05E-04 |
| 23 | GO:0009624: response to nematode | 5.10E-04 |
| 24 | GO:0000373: Group II intron splicing | 5.68E-04 |
| 25 | GO:0048765: root hair cell differentiation | 7.68E-04 |
| 26 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.38E-04 |
| 27 | GO:0009451: RNA modification | 8.79E-04 |
| 28 | GO:0009718: anthocyanin-containing compound biosynthetic process | 9.08E-04 |
| 29 | GO:0010588: cotyledon vascular tissue pattern formation | 9.08E-04 |
| 30 | GO:0010143: cutin biosynthetic process | 9.82E-04 |
| 31 | GO:0009306: protein secretion | 1.63E-03 |
| 32 | GO:0042335: cuticle development | 1.81E-03 |
| 33 | GO:0015979: photosynthesis | 1.82E-03 |
| 34 | GO:0009958: positive gravitropism | 1.90E-03 |
| 35 | GO:0048825: cotyledon development | 2.09E-03 |
| 36 | GO:0009734: auxin-activated signaling pathway | 3.27E-03 |
| 37 | GO:0010311: lateral root formation | 3.47E-03 |
| 38 | GO:0009735: response to cytokinin | 3.76E-03 |
| 39 | GO:0009926: auxin polar transport | 4.68E-03 |
| 40 | GO:0006855: drug transmembrane transport | 5.21E-03 |
| 41 | GO:0009809: lignin biosynthetic process | 5.75E-03 |
| 42 | GO:0009845: seed germination | 9.06E-03 |
| 43 | GO:0042744: hydrogen peroxide catabolic process | 9.39E-03 |
| 44 | GO:0005975: carbohydrate metabolic process | 1.26E-02 |
| 45 | GO:0009723: response to ethylene | 1.62E-02 |
| 46 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.75E-02 |
| 47 | GO:0032259: methylation | 2.18E-02 |
| 48 | GO:0008152: metabolic process | 2.41E-02 |
| 49 | GO:0009416: response to light stimulus | 3.39E-02 |
| 50 | GO:0045893: positive regulation of transcription, DNA-templated | 3.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.77E-05 |
| 6 | GO:0015099: nickel cation transmembrane transporter activity | 4.61E-05 |
| 7 | GO:0016851: magnesium chelatase activity | 1.23E-04 |
| 8 | GO:0010011: auxin binding | 1.69E-04 |
| 9 | GO:0010328: auxin influx transmembrane transporter activity | 1.69E-04 |
| 10 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.72E-04 |
| 11 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.72E-04 |
| 12 | GO:0015293: symporter activity | 3.01E-04 |
| 13 | GO:0015171: amino acid transmembrane transporter activity | 3.99E-04 |
| 14 | GO:0052747: sinapyl alcohol dehydrogenase activity | 4.43E-04 |
| 15 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 8.38E-04 |
| 16 | GO:0004565: beta-galactosidase activity | 9.08E-04 |
| 17 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.82E-04 |
| 18 | GO:0005528: FK506 binding | 1.21E-03 |
| 19 | GO:0016791: phosphatase activity | 2.49E-03 |
| 20 | GO:0004519: endonuclease activity | 2.54E-03 |
| 21 | GO:0016597: amino acid binding | 2.70E-03 |
| 22 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.24E-03 |
| 23 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.36E-03 |
| 24 | GO:0003993: acid phosphatase activity | 4.06E-03 |
| 25 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.94E-03 |
| 26 | GO:0043621: protein self-association | 4.94E-03 |
| 27 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.21E-03 |
| 28 | GO:0016746: transferase activity, transferring acyl groups | 7.49E-03 |
| 29 | GO:0019843: rRNA binding | 8.58E-03 |
| 30 | GO:0005215: transporter activity | 9.18E-03 |
| 31 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.27E-02 |
| 32 | GO:0008168: methyltransferase activity | 1.42E-02 |
| 33 | GO:0004601: peroxidase activity | 1.46E-02 |
| 34 | GO:0016788: hydrolase activity, acting on ester bonds | 1.48E-02 |
| 35 | GO:0009055: electron carrier activity | 2.36E-02 |
| 36 | GO:0008289: lipid binding | 2.85E-02 |
| 37 | GO:0016887: ATPase activity | 3.07E-02 |
| 38 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.13E-02 |
| 39 | GO:0030246: carbohydrate binding | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 1.77E-05 |
| 2 | GO:0010007: magnesium chelatase complex | 8.18E-05 |
| 3 | GO:0009507: chloroplast | 3.09E-04 |
| 4 | GO:0009986: cell surface | 3.84E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.18E-04 |
| 6 | GO:0009534: chloroplast thylakoid | 6.12E-04 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 6.33E-04 |
| 8 | GO:0030095: chloroplast photosystem II | 9.82E-04 |
| 9 | GO:0005618: cell wall | 1.21E-03 |
| 10 | GO:0009523: photosystem II | 2.09E-03 |
| 11 | GO:0043231: intracellular membrane-bounded organelle | 2.57E-03 |
| 12 | GO:0009706: chloroplast inner membrane | 7.34E-03 |
| 13 | GO:0009536: plastid | 1.02E-02 |
| 14 | GO:0005886: plasma membrane | 1.05E-02 |
| 15 | GO:0046658: anchored component of plasma membrane | 1.31E-02 |
| 16 | GO:0016021: integral component of membrane | 1.78E-02 |
| 17 | GO:0016020: membrane | 2.02E-02 |
| 18 | GO:0048046: apoplast | 3.04E-02 |
| 19 | GO:0009579: thylakoid | 3.85E-02 |
| 20 | GO:0009941: chloroplast envelope | 3.92E-02 |
| 21 | GO:0005773: vacuole | 4.42E-02 |
| 22 | GO:0031225: anchored component of membrane | 4.65E-02 |