GO Enrichment Analysis of Co-expressed Genes with
AT1G49540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006480: N-terminal protein amino acid methylation | 0.00E+00 |
| 2 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0002215: defense response to nematode | 3.00E-05 |
| 4 | GO:1902626: assembly of large subunit precursor of preribosome | 5.40E-05 |
| 5 | GO:0042256: mature ribosome assembly | 5.40E-05 |
| 6 | GO:0000460: maturation of 5.8S rRNA | 1.14E-04 |
| 7 | GO:0042273: ribosomal large subunit biogenesis | 1.14E-04 |
| 8 | GO:0006090: pyruvate metabolic process | 1.49E-04 |
| 9 | GO:0009636: response to toxic substance | 1.70E-04 |
| 10 | GO:0000470: maturation of LSU-rRNA | 1.86E-04 |
| 11 | GO:0048280: vesicle fusion with Golgi apparatus | 2.25E-04 |
| 12 | GO:0000054: ribosomal subunit export from nucleus | 2.25E-04 |
| 13 | GO:0009808: lignin metabolic process | 3.52E-04 |
| 14 | GO:0006002: fructose 6-phosphate metabolic process | 3.52E-04 |
| 15 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.97E-04 |
| 16 | GO:0006896: Golgi to vacuole transport | 4.91E-04 |
| 17 | GO:0071365: cellular response to auxin stimulus | 5.89E-04 |
| 18 | GO:0006108: malate metabolic process | 6.40E-04 |
| 19 | GO:0000162: tryptophan biosynthetic process | 7.99E-04 |
| 20 | GO:0051260: protein homooligomerization | 9.65E-04 |
| 21 | GO:0046686: response to cadmium ion | 9.97E-04 |
| 22 | GO:0016226: iron-sulfur cluster assembly | 1.02E-03 |
| 23 | GO:0071215: cellular response to abscisic acid stimulus | 1.08E-03 |
| 24 | GO:0042147: retrograde transport, endosome to Golgi | 1.20E-03 |
| 25 | GO:0045489: pectin biosynthetic process | 1.33E-03 |
| 26 | GO:0006623: protein targeting to vacuole | 1.46E-03 |
| 27 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.52E-03 |
| 28 | GO:0009630: gravitropism | 1.59E-03 |
| 29 | GO:0001666: response to hypoxia | 1.95E-03 |
| 30 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.17E-03 |
| 31 | GO:0009817: defense response to fungus, incompatible interaction | 2.32E-03 |
| 32 | GO:0009407: toxin catabolic process | 2.48E-03 |
| 33 | GO:0010043: response to zinc ion | 2.56E-03 |
| 34 | GO:0055114: oxidation-reduction process | 2.78E-03 |
| 35 | GO:0006855: drug transmembrane transport | 3.59E-03 |
| 36 | GO:0006096: glycolytic process | 4.43E-03 |
| 37 | GO:0018105: peptidyl-serine phosphorylation | 5.13E-03 |
| 38 | GO:0006413: translational initiation | 6.99E-03 |
| 39 | GO:0046777: protein autophosphorylation | 1.21E-02 |
| 40 | GO:0044550: secondary metabolite biosynthetic process | 1.23E-02 |
| 41 | GO:0009651: response to salt stress | 1.61E-02 |
| 42 | GO:0009738: abscisic acid-activated signaling pathway | 2.24E-02 |
| 43 | GO:0035556: intracellular signal transduction | 2.38E-02 |
| 44 | GO:0071555: cell wall organization | 3.80E-02 |
| 45 | GO:0009733: response to auxin | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 2 | GO:0047634: agmatine N4-coumaroyltransferase activity | 0.00E+00 |
| 3 | GO:0047209: coniferyl-alcohol glucosyltransferase activity | 3.00E-05 |
| 4 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.40E-05 |
| 5 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 5.40E-05 |
| 6 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 8.23E-05 |
| 7 | GO:0043023: ribosomal large subunit binding | 8.23E-05 |
| 8 | GO:0004470: malic enzyme activity | 1.14E-04 |
| 9 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 1.14E-04 |
| 10 | GO:0004834: tryptophan synthase activity | 1.14E-04 |
| 11 | GO:0004737: pyruvate decarboxylase activity | 1.14E-04 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.14E-04 |
| 13 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 1.14E-04 |
| 14 | GO:0008948: oxaloacetate decarboxylase activity | 1.49E-04 |
| 15 | GO:0035252: UDP-xylosyltransferase activity | 1.86E-04 |
| 16 | GO:0030976: thiamine pyrophosphate binding | 1.86E-04 |
| 17 | GO:0016831: carboxy-lyase activity | 2.66E-04 |
| 18 | GO:0003872: 6-phosphofructokinase activity | 2.66E-04 |
| 19 | GO:0043022: ribosome binding | 3.08E-04 |
| 20 | GO:0008135: translation factor activity, RNA binding | 3.52E-04 |
| 21 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.40E-04 |
| 22 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.92E-04 |
| 23 | GO:0051536: iron-sulfur cluster binding | 8.54E-04 |
| 24 | GO:0043424: protein histidine kinase binding | 9.08E-04 |
| 25 | GO:0010181: FMN binding | 1.39E-03 |
| 26 | GO:0004872: receptor activity | 1.46E-03 |
| 27 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.09E-03 |
| 28 | GO:0004683: calmodulin-dependent protein kinase activity | 2.17E-03 |
| 29 | GO:0015238: drug transmembrane transporter activity | 2.40E-03 |
| 30 | GO:0000149: SNARE binding | 2.89E-03 |
| 31 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.97E-03 |
| 32 | GO:0004364: glutathione transferase activity | 3.14E-03 |
| 33 | GO:0005484: SNAP receptor activity | 3.23E-03 |
| 34 | GO:0051287: NAD binding | 3.68E-03 |
| 35 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.73E-03 |
| 36 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.73E-03 |
| 37 | GO:0015297: antiporter activity | 7.11E-03 |
| 38 | GO:0008194: UDP-glycosyltransferase activity | 7.93E-03 |
| 39 | GO:0003743: translation initiation factor activity | 8.18E-03 |
| 40 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 8.67E-03 |
| 41 | GO:0000287: magnesium ion binding | 9.82E-03 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 1.10E-02 |
| 43 | GO:0042803: protein homodimerization activity | 1.36E-02 |
| 44 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.39E-02 |
| 45 | GO:0000166: nucleotide binding | 2.29E-02 |
| 46 | GO:0016740: transferase activity | 2.64E-02 |
| 47 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.80E-02 |
| 48 | GO:0019825: oxygen binding | 2.95E-02 |
| 49 | GO:0005516: calmodulin binding | 3.07E-02 |
| 50 | GO:0005509: calcium ion binding | 3.58E-02 |
| 51 | GO:0005506: iron ion binding | 3.75E-02 |
| 52 | GO:0003824: catalytic activity | 4.06E-02 |
| 53 | GO:0005215: transporter activity | 4.08E-02 |
| 54 | GO:0016491: oxidoreductase activity | 4.62E-02 |
| 55 | GO:0005524: ATP binding | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030687: preribosome, large subunit precursor | 1.29E-06 |
| 2 | GO:0005774: vacuolar membrane | 2.88E-06 |
| 3 | GO:0005829: cytosol | 1.99E-05 |
| 4 | GO:0005945: 6-phosphofructokinase complex | 1.49E-04 |
| 5 | GO:0030140: trans-Golgi network transport vesicle | 1.86E-04 |
| 6 | GO:0012507: ER to Golgi transport vesicle membrane | 3.08E-04 |
| 7 | GO:0005770: late endosome | 1.33E-03 |
| 8 | GO:0016020: membrane | 1.94E-03 |
| 9 | GO:0000325: plant-type vacuole | 2.56E-03 |
| 10 | GO:0031902: late endosome membrane | 3.06E-03 |
| 11 | GO:0031201: SNARE complex | 3.06E-03 |
| 12 | GO:0005802: trans-Golgi network | 3.79E-03 |
| 13 | GO:0005773: vacuole | 4.64E-03 |
| 14 | GO:0005615: extracellular space | 7.93E-03 |
| 15 | GO:0022625: cytosolic large ribosomal subunit | 1.20E-02 |
| 16 | GO:0009506: plasmodesma | 1.48E-02 |
| 17 | GO:0043231: intracellular membrane-bounded organelle | 1.64E-02 |
| 18 | GO:0048046: apoplast | 1.74E-02 |
| 19 | GO:0005886: plasma membrane | 1.82E-02 |
| 20 | GO:0005618: cell wall | 1.90E-02 |
| 21 | GO:0005794: Golgi apparatus | 2.17E-02 |
| 22 | GO:0005737: cytoplasm | 3.13E-02 |
| 23 | GO:0009570: chloroplast stroma | 3.15E-02 |
| 24 | GO:0005768: endosome | 3.52E-02 |
| 25 | GO:0000139: Golgi membrane | 4.71E-02 |