Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0080052: response to histidine0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:0080053: response to phenylalanine0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0006793: phosphorus metabolic process0.00E+00
9GO:0051238: sequestering of metal ion0.00E+00
10GO:0071456: cellular response to hypoxia5.22E-11
11GO:0042742: defense response to bacterium7.05E-11
12GO:0002237: response to molecule of bacterial origin3.20E-08
13GO:0010200: response to chitin2.51E-07
14GO:0009617: response to bacterium4.37E-07
15GO:0006032: chitin catabolic process5.37E-07
16GO:0000272: polysaccharide catabolic process7.68E-07
17GO:0010120: camalexin biosynthetic process1.18E-05
18GO:0010204: defense response signaling pathway, resistance gene-independent1.18E-05
19GO:0006468: protein phosphorylation1.22E-05
20GO:0009636: response to toxic substance2.76E-05
21GO:0009626: plant-type hypersensitive response7.07E-05
22GO:0009697: salicylic acid biosynthetic process9.49E-05
23GO:0009817: defense response to fungus, incompatible interaction9.88E-05
24GO:0009407: toxin catabolic process1.18E-04
25GO:0006874: cellular calcium ion homeostasis1.31E-04
26GO:0016998: cell wall macromolecule catabolic process1.51E-04
27GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.88E-04
28GO:0010150: leaf senescence2.80E-04
29GO:0006855: drug transmembrane transport3.02E-04
30GO:0015760: glucose-6-phosphate transport3.04E-04
31GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.04E-04
32GO:0010421: hydrogen peroxide-mediated programmed cell death3.04E-04
33GO:0032491: detection of molecule of fungal origin3.04E-04
34GO:0030091: protein repair3.09E-04
35GO:0006952: defense response3.14E-04
36GO:0009751: response to salicylic acid4.14E-04
37GO:0010112: regulation of systemic acquired resistance4.57E-04
38GO:0051592: response to calcium ion6.66E-04
39GO:0009805: coumarin biosynthetic process6.66E-04
40GO:0048569: post-embryonic animal organ development6.66E-04
41GO:0090057: root radial pattern formation6.66E-04
42GO:0009866: induced systemic resistance, ethylene mediated signaling pathway6.66E-04
43GO:0002240: response to molecule of oomycetes origin6.66E-04
44GO:0044419: interspecies interaction between organisms6.66E-04
45GO:0015712: hexose phosphate transport6.66E-04
46GO:0043066: negative regulation of apoptotic process6.66E-04
47GO:0042939: tripeptide transport6.66E-04
48GO:0009627: systemic acquired resistance7.38E-04
49GO:0008219: cell death8.97E-04
50GO:0035436: triose phosphate transmembrane transport1.08E-03
51GO:0010351: lithium ion transport1.08E-03
52GO:0010272: response to silver ion1.08E-03
53GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.08E-03
54GO:0015692: lead ion transport1.08E-03
55GO:0015714: phosphoenolpyruvate transport1.08E-03
56GO:0080168: abscisic acid transport1.08E-03
57GO:0071367: cellular response to brassinosteroid stimulus1.08E-03
58GO:0034051: negative regulation of plant-type hypersensitive response1.08E-03
59GO:0070588: calcium ion transmembrane transport1.18E-03
60GO:0040008: regulation of growth1.40E-03
61GO:0006882: cellular zinc ion homeostasis1.55E-03
62GO:0046836: glycolipid transport1.55E-03
63GO:0045017: glycerolipid biosynthetic process1.55E-03
64GO:0048194: Golgi vesicle budding1.55E-03
65GO:0070301: cellular response to hydrogen peroxide1.55E-03
66GO:0010104: regulation of ethylene-activated signaling pathway1.55E-03
67GO:0051707: response to other organism1.66E-03
68GO:0080142: regulation of salicylic acid biosynthetic process2.07E-03
69GO:0042938: dipeptide transport2.07E-03
70GO:0010109: regulation of photosynthesis2.07E-03
71GO:0006536: glutamate metabolic process2.07E-03
72GO:0010508: positive regulation of autophagy2.07E-03
73GO:0015713: phosphoglycerate transport2.07E-03
74GO:1901002: positive regulation of response to salt stress2.07E-03
75GO:0034052: positive regulation of plant-type hypersensitive response2.65E-03
76GO:0000304: response to singlet oxygen2.65E-03
77GO:0045487: gibberellin catabolic process2.65E-03
78GO:0055114: oxidation-reduction process2.89E-03
79GO:0002238: response to molecule of fungal origin3.27E-03
80GO:0009643: photosynthetic acclimation3.27E-03
81GO:0050665: hydrogen peroxide biosynthetic process3.27E-03
82GO:0006561: proline biosynthetic process3.27E-03
83GO:0015691: cadmium ion transport3.27E-03
84GO:0010256: endomembrane system organization3.27E-03
85GO:0060918: auxin transport3.27E-03
86GO:0009620: response to fungus3.38E-03
87GO:0002229: defense response to oomycetes3.55E-03
88GO:0010193: response to ozone3.55E-03
89GO:0009624: response to nematode3.79E-03
90GO:0009854: oxidative photosynthetic carbon pathway3.93E-03
91GO:1900056: negative regulation of leaf senescence4.64E-03
92GO:0050829: defense response to Gram-negative bacterium4.64E-03
93GO:0070370: cellular heat acclimation4.64E-03
94GO:0030026: cellular manganese ion homeostasis4.64E-03
95GO:1900057: positive regulation of leaf senescence4.64E-03
96GO:0051607: defense response to virus4.84E-03
97GO:0009615: response to virus5.13E-03
98GO:2000070: regulation of response to water deprivation5.39E-03
99GO:0009642: response to light intensity5.39E-03
100GO:0009816: defense response to bacterium, incompatible interaction5.42E-03
101GO:0030968: endoplasmic reticulum unfolded protein response6.18E-03
102GO:0043562: cellular response to nitrogen levels6.18E-03
103GO:0009699: phenylpropanoid biosynthetic process6.18E-03
104GO:0001558: regulation of cell growth6.18E-03
105GO:0010262: somatic embryogenesis6.18E-03
106GO:0050832: defense response to fungus6.76E-03
107GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.87E-03
108GO:0009737: response to abscisic acid8.64E-03
109GO:0009688: abscisic acid biosynthetic process8.77E-03
110GO:0010162: seed dormancy process8.77E-03
111GO:0055062: phosphate ion homeostasis8.77E-03
112GO:0007064: mitotic sister chromatid cohesion8.77E-03
113GO:0009870: defense response signaling pathway, resistance gene-dependent8.77E-03
114GO:0009682: induced systemic resistance9.71E-03
115GO:0009089: lysine biosynthetic process via diaminopimelate9.71E-03
116GO:0042542: response to hydrogen peroxide1.05E-02
117GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.07E-02
118GO:0006820: anion transport1.07E-02
119GO:0002213: defense response to insect1.07E-02
120GO:0009718: anthocyanin-containing compound biosynthetic process1.17E-02
121GO:0034605: cellular response to heat1.27E-02
122GO:0010053: root epidermal cell differentiation1.38E-02
123GO:0042538: hyperosmotic salinity response1.38E-02
124GO:0042343: indole glucosinolate metabolic process1.38E-02
125GO:0005992: trehalose biosynthetic process1.60E-02
126GO:0009863: salicylic acid mediated signaling pathway1.60E-02
127GO:0051302: regulation of cell division1.72E-02
128GO:0080167: response to karrikin1.75E-02
129GO:0009611: response to wounding1.81E-02
130GO:0098542: defense response to other organism1.84E-02
131GO:0031348: negative regulation of defense response1.96E-02
132GO:0019748: secondary metabolic process1.96E-02
133GO:0009814: defense response, incompatible interaction1.96E-02
134GO:0071369: cellular response to ethylene stimulus2.09E-02
135GO:0006012: galactose metabolic process2.09E-02
136GO:0071215: cellular response to abscisic acid stimulus2.09E-02
137GO:0009686: gibberellin biosynthetic process2.09E-02
138GO:0009411: response to UV2.09E-02
139GO:0006817: phosphate ion transport2.22E-02
140GO:0010091: trichome branching2.22E-02
141GO:0042631: cellular response to water deprivation2.48E-02
142GO:0042391: regulation of membrane potential2.48E-02
143GO:0009958: positive gravitropism2.62E-02
144GO:0032259: methylation2.70E-02
145GO:0006814: sodium ion transport2.76E-02
146GO:0042752: regulation of circadian rhythm2.76E-02
147GO:0010183: pollen tube guidance2.90E-02
148GO:0009749: response to glucose2.90E-02
149GO:0000302: response to reactive oxygen species3.04E-02
150GO:0009753: response to jasmonic acid3.11E-02
151GO:0010252: auxin homeostasis3.49E-02
152GO:0009639: response to red or far red light3.49E-02
153GO:0009607: response to biotic stimulus4.11E-02
154GO:0007166: cell surface receptor signaling pathway4.17E-02
155GO:0016049: cell growth4.60E-02
156GO:0009813: flavonoid biosynthetic process4.94E-02
157GO:0006979: response to oxidative stress4.95E-02
RankGO TermAdjusted P value
1GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0003796: lysozyme activity0.00E+00
4GO:0004568: chitinase activity5.37E-07
5GO:0016301: kinase activity9.49E-06
6GO:0005516: calmodulin binding4.94E-05
7GO:0008061: chitin binding8.18E-05
8GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.28E-04
9GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.88E-04
10GO:0004674: protein serine/threonine kinase activity2.02E-04
11GO:0004364: glutathione transferase activity2.18E-04
12GO:0010285: L,L-diaminopimelate aminotransferase activity3.04E-04
13GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.04E-04
14GO:0045543: gibberellin 2-beta-dioxygenase activity6.66E-04
15GO:0015152: glucose-6-phosphate transmembrane transporter activity6.66E-04
16GO:0042937: tripeptide transporter activity6.66E-04
17GO:0050660: flavin adenine dinucleotide binding8.07E-04
18GO:0005388: calcium-transporting ATPase activity9.40E-04
19GO:0015238: drug transmembrane transporter activity9.53E-04
20GO:0071917: triose-phosphate transmembrane transporter activity1.08E-03
21GO:0005217: intracellular ligand-gated ion channel activity1.18E-03
22GO:0004970: ionotropic glutamate receptor activity1.18E-03
23GO:0015297: antiporter activity1.40E-03
24GO:0005524: ATP binding1.54E-03
25GO:0004351: glutamate decarboxylase activity1.55E-03
26GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.55E-03
27GO:0017089: glycolipid transporter activity1.55E-03
28GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.55E-03
29GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.55E-03
30GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.55E-03
31GO:0043565: sequence-specific DNA binding1.64E-03
32GO:0009055: electron carrier activity2.04E-03
33GO:0010279: indole-3-acetic acid amido synthetase activity2.07E-03
34GO:0009916: alternative oxidase activity2.07E-03
35GO:0008891: glycolate oxidase activity2.07E-03
36GO:0015120: phosphoglycerate transmembrane transporter activity2.07E-03
37GO:0015368: calcium:cation antiporter activity2.07E-03
38GO:0042936: dipeptide transporter activity2.07E-03
39GO:0051861: glycolipid binding2.07E-03
40GO:0015369: calcium:proton antiporter activity2.07E-03
41GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.65E-03
42GO:0045431: flavonol synthase activity2.65E-03
43GO:0004866: endopeptidase inhibitor activity3.27E-03
44GO:0030976: thiamine pyrophosphate binding3.27E-03
45GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.93E-03
46GO:0004012: phospholipid-translocating ATPase activity3.93E-03
47GO:0003978: UDP-glucose 4-epimerase activity3.93E-03
48GO:0004144: diacylglycerol O-acyltransferase activity3.93E-03
49GO:0015491: cation:cation antiporter activity5.39E-03
50GO:0015288: porin activity5.39E-03
51GO:0008308: voltage-gated anion channel activity6.18E-03
52GO:0030145: manganese ion binding7.74E-03
53GO:0008171: O-methyltransferase activity8.77E-03
54GO:0004713: protein tyrosine kinase activity8.77E-03
55GO:0008559: xenobiotic-transporting ATPase activity9.71E-03
56GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.03E-02
57GO:0005315: inorganic phosphate transmembrane transporter activity1.17E-02
58GO:0005262: calcium channel activity1.17E-02
59GO:0015114: phosphate ion transmembrane transporter activity1.17E-02
60GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.17E-02
61GO:0004022: alcohol dehydrogenase (NAD) activity1.17E-02
62GO:0004190: aspartic-type endopeptidase activity1.38E-02
63GO:0030552: cAMP binding1.38E-02
64GO:0004867: serine-type endopeptidase inhibitor activity1.38E-02
65GO:0030553: cGMP binding1.38E-02
66GO:0005509: calcium ion binding1.46E-02
67GO:0016298: lipase activity1.53E-02
68GO:0008134: transcription factor binding1.60E-02
69GO:0044212: transcription regulatory region DNA binding1.68E-02
70GO:0005216: ion channel activity1.72E-02
71GO:0045735: nutrient reservoir activity1.75E-02
72GO:0004298: threonine-type endopeptidase activity1.84E-02
73GO:0005215: transporter activity1.99E-02
74GO:0004499: N,N-dimethylaniline monooxygenase activity2.22E-02
75GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.41E-02
76GO:0005249: voltage-gated potassium channel activity2.48E-02
77GO:0030551: cyclic nucleotide binding2.48E-02
78GO:0005199: structural constituent of cell wall2.62E-02
79GO:0030246: carbohydrate binding2.71E-02
80GO:0010181: FMN binding2.76E-02
81GO:0030170: pyridoxal phosphate binding2.94E-02
82GO:0004672: protein kinase activity3.21E-02
83GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.40E-02
84GO:0008483: transaminase activity3.64E-02
85GO:0051213: dioxygenase activity3.95E-02
86GO:0003700: transcription factor activity, sequence-specific DNA binding4.35E-02
87GO:0004683: calmodulin-dependent protein kinase activity4.44E-02
88GO:0030247: polysaccharide binding4.44E-02
89GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.60E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.17E-07
2GO:0005886: plasma membrane2.65E-04
3GO:0005576: extracellular region3.29E-04
4GO:0009530: primary cell wall1.08E-03
5GO:0005741: mitochondrial outer membrane1.76E-03
6GO:0031225: anchored component of membrane3.23E-03
7GO:0046930: pore complex6.18E-03
8GO:0019773: proteasome core complex, alpha-subunit complex6.18E-03
9GO:0000325: plant-type vacuole7.74E-03
10GO:0005740: mitochondrial envelope8.77E-03
11GO:0031012: extracellular matrix1.17E-02
12GO:0070469: respiratory chain1.72E-02
13GO:0005839: proteasome core complex1.84E-02
14GO:0048046: apoplast2.65E-02
15GO:0005618: cell wall3.15E-02
16GO:0071944: cell periphery3.33E-02
17GO:0009705: plant-type vacuole membrane3.65E-02
18GO:0005615: extracellular space4.08E-02
19GO:0005887: integral component of plasma membrane4.15E-02
20GO:0046658: anchored component of plasma membrane4.81E-02
Gene type



Gene DE type