co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G48110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.45E-05
2	GO:0000003: reproduction	3.25E-05
3	GO:0006401: RNA catabolic process	8.18E-05
4	GO:1900056: negative regulation of leaf senescence	8.18E-05
5	GO:0042255: ribosome assembly	9.62E-05
6	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.11E-04
7	GO:0009658: chloroplast organization	1.42E-04
8	GO:0000387: spliceosomal snRNP assembly	1.44E-04
9	GO:0010380: regulation of chlorophyll biosynthetic process	1.44E-04
10	GO:0008360: regulation of cell shape	4.60E-04
11	GO:0045893: positive regulation of transcription, DNA-templated	5.37E-04
12	GO:0032502: developmental process	5.50E-04
13	GO:0009639: response to red or far red light	5.98E-04
14	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.94E-04
15	GO:0009910: negative regulation of flower development	8.71E-04
16	GO:0006364: rRNA processing	1.32E-03
17	GO:0009740: gibberellic acid mediated signaling pathway	1.59E-03
18	GO:0007623: circadian rhythm	2.39E-03
19	GO:0009739: response to gibberellin	2.58E-03
20	GO:0008380: RNA splicing	2.69E-03
21	GO:0010468: regulation of gene expression	2.69E-03
22	GO:0006970: response to osmotic stress	3.37E-03
23	GO:0006355: regulation of transcription, DNA-templated	3.39E-03
24	GO:0009738: abscisic acid-activated signaling pathway	7.03E-03
25	GO:0009555: pollen development	7.19E-03
26	GO:0035556: intracellular signal transduction	7.47E-03
27	GO:0006351: transcription, DNA-templated	1.01E-02
28	GO:0009414: response to water deprivation	1.16E-02
29	GO:0071555: cell wall organization	1.18E-02
30	GO:0042742: defense response to bacterium	1.18E-02
31	GO:0007165: signal transduction	1.99E-02
32	GO:0009737: response to abscisic acid	2.02E-02
33	GO:0009651: response to salt stress	2.80E-02

Rank	GO Term	Adjusted P value
1	GO:0036002: pre-mRNA binding	7.70E-06
2	GO:0017070: U6 snRNA binding	4.33E-05
3	GO:0003843: 1,3-beta-D-glucan synthase activity	1.11E-04
4	GO:0000175: 3'-5'-exoribonuclease activity	2.14E-04
5	GO:0004540: ribonuclease activity	3.32E-04
6	GO:0003727: single-stranded RNA binding	3.94E-04
7	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	8.45E-04
8	GO:0019843: rRNA binding	1.93E-03
9	GO:0003677: DNA binding	2.21E-03
10	GO:0042803: protein homodimerization activity	4.33E-03
11	GO:0046872: metal ion binding	5.86E-03
12	GO:0003723: RNA binding	6.87E-03
13	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.77E-03
14	GO:0044212: transcription regulatory region DNA binding	1.18E-02
15	GO:0004672: protein kinase activity	1.55E-02
16	GO:0003729: mRNA binding	1.56E-02
17	GO:0005515: protein binding	2.43E-02
18	GO:0016757: transferase activity, transferring glycosyl groups	2.82E-02
19	GO:0004674: protein serine/threonine kinase activity	3.68E-02
20	GO:0043565: sequence-specific DNA binding	3.78E-02

Rank	GO Term	Adjusted P value
1	GO:0071007: U2-type catalytic step 2 spliceosome	7.70E-06
2	GO:0071006: U2-type catalytic step 1 spliceosome	2.28E-05
3	GO:0000178: exosome (RNase complex)	4.33E-05
4	GO:0000974: Prp19 complex	5.52E-05
5	GO:0000148: 1,3-beta-D-glucan synthase complex	1.11E-04
6	GO:0000932: P-body	6.69E-04
7	GO:0005634: nucleus	2.60E-03