Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G47550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019303: D-ribose catabolic process0.00E+00
2GO:0000042: protein targeting to Golgi0.00E+00
3GO:0048193: Golgi vesicle transport1.57E-06
4GO:0006376: mRNA splice site selection8.86E-06
5GO:0048358: mucilage pectin biosynthetic process8.86E-06
6GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic8.86E-06
7GO:0010393: galacturonan metabolic process8.86E-06
8GO:0061014: positive regulation of mRNA catabolic process8.86E-06
9GO:0071217: cellular response to external biotic stimulus2.38E-05
10GO:0046740: transport of virus in host, cell to cell2.38E-05
11GO:0046898: response to cycloheximide2.38E-05
12GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid4.33E-05
13GO:0010272: response to silver ion4.33E-05
14GO:0010587: miRNA catabolic process6.64E-05
15GO:0010071: root meristem specification6.64E-05
16GO:0080001: mucilage extrusion from seed coat6.64E-05
17GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA9.27E-05
18GO:1902183: regulation of shoot apical meristem development1.21E-04
19GO:0048359: mucilage metabolic process involved in seed coat development1.21E-04
20GO:0047484: regulation of response to osmotic stress1.52E-04
21GO:1901001: negative regulation of response to salt stress1.85E-04
22GO:0046835: carbohydrate phosphorylation1.85E-04
23GO:0070370: cellular heat acclimation2.19E-04
24GO:1902074: response to salt2.19E-04
25GO:0045995: regulation of embryonic development2.19E-04
26GO:0006511: ubiquitin-dependent protein catabolic process2.35E-04
27GO:0006402: mRNA catabolic process2.54E-04
28GO:0010078: maintenance of root meristem identity2.54E-04
29GO:0010492: maintenance of shoot apical meristem identity2.54E-04
30GO:0040029: regulation of gene expression, epigenetic2.54E-04
31GO:0016559: peroxisome fission2.54E-04
32GO:0006367: transcription initiation from RNA polymerase II promoter2.91E-04
33GO:0009827: plant-type cell wall modification2.91E-04
34GO:2000024: regulation of leaf development3.29E-04
35GO:0010192: mucilage biosynthetic process4.07E-04
36GO:0000266: mitochondrial fission4.90E-04
37GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process5.33E-04
38GO:0007031: peroxisome organization6.20E-04
39GO:0009944: polarity specification of adaxial/abaxial axis7.11E-04
40GO:0009116: nucleoside metabolic process7.11E-04
41GO:0010073: meristem maintenance7.58E-04
42GO:0007131: reciprocal meiotic recombination8.54E-04
43GO:0001944: vasculature development9.02E-04
44GO:0080022: primary root development1.05E-03
45GO:0009791: post-embryonic development1.21E-03
46GO:0006891: intra-Golgi vesicle-mediated transport1.26E-03
47GO:0009630: gravitropism1.32E-03
48GO:0009567: double fertilization forming a zygote and endosperm1.43E-03
49GO:0010286: heat acclimation1.49E-03
50GO:0016579: protein deubiquitination1.55E-03
51GO:0001666: response to hypoxia1.61E-03
52GO:0006974: cellular response to DNA damage stimulus1.73E-03
53GO:0051301: cell division1.95E-03
54GO:0000209: protein polyubiquitination2.74E-03
55GO:0031347: regulation of defense response3.03E-03
56GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.03E-03
57GO:0009909: regulation of flower development3.49E-03
58GO:0009620: response to fungus3.89E-03
59GO:0009624: response to nematode4.15E-03
60GO:0009790: embryo development5.37E-03
61GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.51E-03
62GO:0008380: RNA splicing6.81E-03
63GO:0009617: response to bacterium6.81E-03
64GO:0010468: regulation of gene expression6.81E-03
65GO:0009826: unidimensional cell growth7.95E-03
66GO:0009793: embryo development ending in seed dormancy8.27E-03
67GO:0007049: cell cycle8.81E-03
68GO:0009723: response to ethylene9.03E-03
69GO:0045892: negative regulation of transcription, DNA-templated1.09E-02
70GO:0006397: mRNA processing1.29E-02
71GO:0009873: ethylene-activated signaling pathway1.50E-02
72GO:0009908: flower development1.75E-02
73GO:0009611: response to wounding1.90E-02
74GO:0045893: positive regulation of transcription, DNA-templated2.07E-02
75GO:0009414: response to water deprivation3.05E-02
76GO:0006979: response to oxidative stress3.12E-02
77GO:0030154: cell differentiation3.30E-02
78GO:0009733: response to auxin3.37E-02
79GO:0015031: protein transport3.68E-02
RankGO TermAdjusted P value
1GO:0004534: 5'-3' exoribonuclease activity2.38E-05
2GO:0070063: RNA polymerase binding4.33E-05
3GO:0008409: 5'-3' exonuclease activity9.27E-05
4GO:0004747: ribokinase activity1.85E-04
5GO:0031624: ubiquitin conjugating enzyme binding5.76E-04
6GO:0003729: mRNA binding6.55E-04
7GO:0036459: thiol-dependent ubiquitinyl hydrolase activity8.05E-04
8GO:0003924: GTPase activity1.04E-03
9GO:0003713: transcription coactivator activity1.10E-03
10GO:0004843: thiol-dependent ubiquitin-specific protease activity1.26E-03
11GO:0005525: GTP binding2.93E-03
12GO:0016874: ligase activity3.98E-03
13GO:0005515: protein binding4.47E-03
14GO:0008017: microtubule binding6.22E-03
15GO:0046982: protein heterodimerization activity8.05E-03
16GO:0061630: ubiquitin protein ligase activity9.83E-03
17GO:0042803: protein homodimerization activity1.11E-02
18GO:0003676: nucleic acid binding1.48E-02
19GO:0000166: nucleotide binding1.88E-02
20GO:0008270: zinc ion binding2.31E-02
21GO:0003723: RNA binding2.81E-02
22GO:0004842: ubiquitin-protein transferase activity3.91E-02
RankGO TermAdjusted P value
1GO:0005672: transcription factor TFIIA complex4.33E-05
2GO:0042646: plastid nucleoid6.64E-05
3GO:0005634: nucleus9.26E-05
4GO:0005844: polysome9.27E-05
5GO:0000795: synaptonemal complex1.21E-04
6GO:0030173: integral component of Golgi membrane1.85E-04
7GO:0031595: nuclear proteasome complex2.19E-04
8GO:0071004: U2-type prespliceosome2.54E-04
9GO:0010494: cytoplasmic stress granule3.29E-04
10GO:0005685: U1 snRNP3.29E-04
11GO:0008541: proteasome regulatory particle, lid subcomplex4.48E-04
12GO:0000932: P-body1.61E-03
13GO:0000151: ubiquitin ligase complex1.92E-03
14GO:0031902: late endosome membrane2.52E-03
15GO:0005802: trans-Golgi network2.85E-03
16GO:0000502: proteasome complex3.26E-03
17GO:0005635: nuclear envelope3.42E-03
18GO:0005654: nucleoplasm4.74E-03
19GO:0005829: cytosol5.08E-03
20GO:0080008: Cul4-RING E3 ubiquitin ligase complex8.70E-03
21GO:0005794: Golgi apparatus1.50E-02
22GO:0005737: cytoplasm1.59E-02
23GO:0005777: peroxisome2.07E-02
24GO:0005768: endosome2.88E-02
25GO:0009536: plastid3.59E-02
26GO:0000139: Golgi membrane3.85E-02
27GO:0009506: plasmodesma4.74E-02
Gene type



Gene DE type