GO Enrichment Analysis of Co-expressed Genes with
AT1G42970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051881: regulation of mitochondrial membrane potential | 0.00E+00 |
| 2 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0015822: ornithine transport | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 7 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 3.19E-08 |
| 9 | GO:0006810: transport | 5.06E-07 |
| 10 | GO:0019464: glycine decarboxylation via glycine cleavage system | 6.47E-06 |
| 11 | GO:0006546: glycine catabolic process | 6.47E-06 |
| 12 | GO:0000066: mitochondrial ornithine transport | 8.25E-05 |
| 13 | GO:0010028: xanthophyll cycle | 8.25E-05 |
| 14 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.14E-04 |
| 15 | GO:0000272: polysaccharide catabolic process | 1.14E-04 |
| 16 | GO:0009767: photosynthetic electron transport chain | 1.54E-04 |
| 17 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.97E-04 |
| 18 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.97E-04 |
| 19 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.97E-04 |
| 20 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.97E-04 |
| 21 | GO:0043039: tRNA aminoacylation | 1.97E-04 |
| 22 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.97E-04 |
| 23 | GO:0006096: glycolytic process | 3.01E-04 |
| 24 | GO:0006696: ergosterol biosynthetic process | 3.29E-04 |
| 25 | GO:0006000: fructose metabolic process | 3.29E-04 |
| 26 | GO:2001141: regulation of RNA biosynthetic process | 4.75E-04 |
| 27 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.75E-04 |
| 28 | GO:0046902: regulation of mitochondrial membrane permeability | 4.75E-04 |
| 29 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.75E-04 |
| 30 | GO:0033014: tetrapyrrole biosynthetic process | 4.75E-04 |
| 31 | GO:0019252: starch biosynthetic process | 5.70E-04 |
| 32 | GO:0006542: glutamine biosynthetic process | 6.32E-04 |
| 33 | GO:0006479: protein methylation | 6.32E-04 |
| 34 | GO:0019676: ammonia assimilation cycle | 6.32E-04 |
| 35 | GO:0045727: positive regulation of translation | 6.32E-04 |
| 36 | GO:0010236: plastoquinone biosynthetic process | 8.00E-04 |
| 37 | GO:0009735: response to cytokinin | 9.50E-04 |
| 38 | GO:0009817: defense response to fungus, incompatible interaction | 1.12E-03 |
| 39 | GO:0009854: oxidative photosynthetic carbon pathway | 1.16E-03 |
| 40 | GO:1901259: chloroplast rRNA processing | 1.16E-03 |
| 41 | GO:0006955: immune response | 1.36E-03 |
| 42 | GO:0009853: photorespiration | 1.40E-03 |
| 43 | GO:0046686: response to cadmium ion | 1.46E-03 |
| 44 | GO:0008610: lipid biosynthetic process | 1.57E-03 |
| 45 | GO:0005978: glycogen biosynthetic process | 1.57E-03 |
| 46 | GO:0009642: response to light intensity | 1.57E-03 |
| 47 | GO:0006839: mitochondrial transport | 1.59E-03 |
| 48 | GO:0006002: fructose 6-phosphate metabolic process | 1.79E-03 |
| 49 | GO:0071482: cellular response to light stimulus | 1.79E-03 |
| 50 | GO:0006526: arginine biosynthetic process | 1.79E-03 |
| 51 | GO:0032544: plastid translation | 1.79E-03 |
| 52 | GO:0009056: catabolic process | 2.02E-03 |
| 53 | GO:0098656: anion transmembrane transport | 2.02E-03 |
| 54 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.02E-03 |
| 55 | GO:0006783: heme biosynthetic process | 2.02E-03 |
| 56 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.26E-03 |
| 57 | GO:0006259: DNA metabolic process | 2.51E-03 |
| 58 | GO:0009773: photosynthetic electron transport in photosystem I | 2.77E-03 |
| 59 | GO:0019684: photosynthesis, light reaction | 2.77E-03 |
| 60 | GO:0006265: DNA topological change | 2.77E-03 |
| 61 | GO:0043085: positive regulation of catalytic activity | 2.77E-03 |
| 62 | GO:0006352: DNA-templated transcription, initiation | 2.77E-03 |
| 63 | GO:0006094: gluconeogenesis | 3.31E-03 |
| 64 | GO:0005986: sucrose biosynthetic process | 3.31E-03 |
| 65 | GO:0006418: tRNA aminoacylation for protein translation | 4.80E-03 |
| 66 | GO:0009409: response to cold | 4.99E-03 |
| 67 | GO:0016998: cell wall macromolecule catabolic process | 5.12E-03 |
| 68 | GO:0009416: response to light stimulus | 5.80E-03 |
| 69 | GO:0016117: carotenoid biosynthetic process | 6.48E-03 |
| 70 | GO:0042631: cellular response to water deprivation | 6.83E-03 |
| 71 | GO:0010468: regulation of gene expression | 6.98E-03 |
| 72 | GO:0009741: response to brassinosteroid | 7.20E-03 |
| 73 | GO:0006662: glycerol ether metabolic process | 7.20E-03 |
| 74 | GO:0007059: chromosome segregation | 7.57E-03 |
| 75 | GO:0009646: response to absence of light | 7.57E-03 |
| 76 | GO:0032502: developmental process | 8.73E-03 |
| 77 | GO:0009658: chloroplast organization | 9.05E-03 |
| 78 | GO:0048573: photoperiodism, flowering | 1.21E-02 |
| 79 | GO:0018298: protein-chromophore linkage | 1.30E-02 |
| 80 | GO:0045454: cell redox homeostasis | 1.35E-02 |
| 81 | GO:0042742: defense response to bacterium | 1.42E-02 |
| 82 | GO:0007568: aging | 1.44E-02 |
| 83 | GO:0016051: carbohydrate biosynthetic process | 1.54E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.59E-02 |
| 85 | GO:0008152: metabolic process | 1.83E-02 |
| 86 | GO:0009744: response to sucrose | 1.84E-02 |
| 87 | GO:0006364: rRNA processing | 2.28E-02 |
| 88 | GO:0005975: carbohydrate metabolic process | 2.40E-02 |
| 89 | GO:0048367: shoot system development | 2.62E-02 |
| 90 | GO:0048316: seed development | 2.62E-02 |
| 91 | GO:0009620: response to fungus | 2.74E-02 |
| 92 | GO:0009742: brassinosteroid mediated signaling pathway | 3.05E-02 |
| 93 | GO:0007623: circadian rhythm | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 5 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 6 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 7 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 8 | GO:0004618: phosphoglycerate kinase activity | 3.72E-07 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 3.39E-06 |
| 10 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.36E-05 |
| 11 | GO:0042834: peptidoglycan binding | 8.25E-05 |
| 12 | GO:0004831: tyrosine-tRNA ligase activity | 8.25E-05 |
| 13 | GO:0004325: ferrochelatase activity | 8.25E-05 |
| 14 | GO:0051996: squalene synthase activity | 8.25E-05 |
| 15 | GO:0010297: heteropolysaccharide binding | 1.97E-04 |
| 16 | GO:0004047: aminomethyltransferase activity | 1.97E-04 |
| 17 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.97E-04 |
| 18 | GO:0000064: L-ornithine transmembrane transporter activity | 1.97E-04 |
| 19 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.97E-04 |
| 20 | GO:0003913: DNA photolyase activity | 3.29E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.29E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 3.29E-04 |
| 23 | GO:0017057: 6-phosphogluconolactonase activity | 4.75E-04 |
| 24 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.75E-04 |
| 25 | GO:0008276: protein methyltransferase activity | 4.75E-04 |
| 26 | GO:0048038: quinone binding | 6.09E-04 |
| 27 | GO:0001053: plastid sigma factor activity | 6.32E-04 |
| 28 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.32E-04 |
| 29 | GO:0016987: sigma factor activity | 6.32E-04 |
| 30 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 6.32E-04 |
| 31 | GO:0016787: hydrolase activity | 6.34E-04 |
| 32 | GO:0003824: catalytic activity | 7.98E-04 |
| 33 | GO:0005471: ATP:ADP antiporter activity | 8.00E-04 |
| 34 | GO:0004356: glutamate-ammonia ligase activity | 8.00E-04 |
| 35 | GO:0080030: methyl indole-3-acetate esterase activity | 9.77E-04 |
| 36 | GO:0102229: amylopectin maltohydrolase activity | 9.77E-04 |
| 37 | GO:0042578: phosphoric ester hydrolase activity | 9.77E-04 |
| 38 | GO:0016161: beta-amylase activity | 1.16E-03 |
| 39 | GO:0009881: photoreceptor activity | 1.36E-03 |
| 40 | GO:0004033: aldo-keto reductase (NADP) activity | 1.57E-03 |
| 41 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.79E-03 |
| 42 | GO:0008047: enzyme activator activity | 2.51E-03 |
| 43 | GO:0022857: transmembrane transporter activity | 3.20E-03 |
| 44 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.31E-03 |
| 45 | GO:0031072: heat shock protein binding | 3.31E-03 |
| 46 | GO:0008081: phosphoric diester hydrolase activity | 3.31E-03 |
| 47 | GO:0019843: rRNA binding | 4.25E-03 |
| 48 | GO:0008514: organic anion transmembrane transporter activity | 6.13E-03 |
| 49 | GO:0003756: protein disulfide isomerase activity | 6.13E-03 |
| 50 | GO:0047134: protein-disulfide reductase activity | 6.48E-03 |
| 51 | GO:0004812: aminoacyl-tRNA ligase activity | 6.48E-03 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 7.57E-03 |
| 53 | GO:0016853: isomerase activity | 7.57E-03 |
| 54 | GO:0050662: coenzyme binding | 7.57E-03 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.12E-03 |
| 56 | GO:0016788: hydrolase activity, acting on ester bonds | 9.22E-03 |
| 57 | GO:0008483: transaminase activity | 9.94E-03 |
| 58 | GO:0016597: amino acid binding | 1.04E-02 |
| 59 | GO:0052689: carboxylic ester hydrolase activity | 1.24E-02 |
| 60 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.26E-02 |
| 61 | GO:0050897: cobalt ion binding | 1.44E-02 |
| 62 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.59E-02 |
| 63 | GO:0005198: structural molecule activity | 2.00E-02 |
| 64 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.28E-02 |
| 65 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.62E-02 |
| 66 | GO:0051082: unfolded protein binding | 2.93E-02 |
| 67 | GO:0015035: protein disulfide oxidoreductase activity | 2.99E-02 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 2.99E-02 |
| 69 | GO:0016758: transferase activity, transferring hexosyl groups | 3.37E-02 |
| 70 | GO:0016740: transferase activity | 3.60E-02 |
| 71 | GO:0005524: ATP binding | 4.38E-02 |
| 72 | GO:0008194: UDP-glycosyltransferase activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0030931: heterotetrameric ADPG pyrophosphorylase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 5.24E-25 |
| 4 | GO:0009570: chloroplast stroma | 1.47E-15 |
| 5 | GO:0009941: chloroplast envelope | 4.84E-12 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.66E-09 |
| 7 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.72E-07 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.94E-07 |
| 9 | GO:0005960: glycine cleavage complex | 3.39E-06 |
| 10 | GO:0009579: thylakoid | 3.32E-05 |
| 11 | GO:0010319: stromule | 4.31E-05 |
| 12 | GO:0030095: chloroplast photosystem II | 1.75E-04 |
| 13 | GO:0045254: pyruvate dehydrogenase complex | 1.97E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 2.65E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 2.75E-04 |
| 16 | GO:0042646: plastid nucleoid | 4.75E-04 |
| 17 | GO:0010287: plastoglobule | 4.78E-04 |
| 18 | GO:0048046: apoplast | 4.84E-04 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 5.12E-04 |
| 20 | GO:0019898: extrinsic component of membrane | 5.70E-04 |
| 21 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 6.32E-04 |
| 22 | GO:0009295: nucleoid | 7.76E-04 |
| 23 | GO:0055035: plastid thylakoid membrane | 8.00E-04 |
| 24 | GO:0042644: chloroplast nucleoid | 2.02E-03 |
| 25 | GO:0005743: mitochondrial inner membrane | 2.56E-03 |
| 26 | GO:0009508: plastid chromosome | 3.31E-03 |
| 27 | GO:0009536: plastid | 4.30E-03 |
| 28 | GO:0005759: mitochondrial matrix | 5.32E-03 |
| 29 | GO:0005739: mitochondrion | 8.04E-03 |
| 30 | GO:0005778: peroxisomal membrane | 9.94E-03 |
| 31 | GO:0031969: chloroplast membrane | 1.12E-02 |
| 32 | GO:0031977: thylakoid lumen | 1.74E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 2.62E-02 |
| 34 | GO:0022626: cytosolic ribosome | 2.83E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 2.93E-02 |