co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G36390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
2	GO:0006399: tRNA metabolic process	0.00E+00
3	GO:0015995: chlorophyll biosynthetic process	1.44E-08
4	GO:0090391: granum assembly	9.10E-07
5	GO:0010196: nonphotochemical quenching	2.15E-05
6	GO:0048564: photosystem I assembly	2.83E-05
7	GO:0010027: thylakoid membrane organization	3.08E-05
8	GO:0071482: cellular response to light stimulus	3.64E-05
9	GO:0006352: DNA-templated transcription, initiation	7.90E-05
10	GO:0006568: tryptophan metabolic process	1.55E-04
11	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.63E-04
12	GO:0051604: protein maturation	2.63E-04
13	GO:0033014: tetrapyrrole biosynthetic process	3.82E-04
14	GO:0006986: response to unfolded protein	3.82E-04
15	GO:2001141: regulation of RNA biosynthetic process	3.82E-04
16	GO:0051085: chaperone mediated protein folding requiring cofactor	3.82E-04
17	GO:0071483: cellular response to blue light	5.10E-04
18	GO:0009451: RNA modification	5.20E-04
19	GO:0009735: response to cytokinin	5.73E-04
20	GO:0045038: protein import into chloroplast thylakoid membrane	6.45E-04
21	GO:0007094: mitotic spindle assembly checkpoint	6.45E-04
22	GO:0000470: maturation of LSU-rRNA	7.90E-04
23	GO:0009658: chloroplast organization	8.69E-04
24	GO:0006400: tRNA modification	1.10E-03
25	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.10E-03
26	GO:0042255: ribosome assembly	1.26E-03
27	GO:0006353: DNA-templated transcription, termination	1.26E-03
28	GO:0045292: mRNA cis splicing, via spliceosome	1.26E-03
29	GO:0015979: photosynthesis	1.33E-03
30	GO:0009657: plastid organization	1.44E-03
31	GO:0006783: heme biosynthetic process	1.62E-03
32	GO:0000373: Group II intron splicing	1.62E-03
33	GO:0006779: porphyrin-containing compound biosynthetic process	1.81E-03
34	GO:1900865: chloroplast RNA modification	1.81E-03
35	GO:0006412: translation	1.86E-03
36	GO:0006782: protoporphyrinogen IX biosynthetic process	2.01E-03
37	GO:0009073: aromatic amino acid family biosynthetic process	2.21E-03
38	GO:0009767: photosynthetic electron transport chain	2.64E-03
39	GO:2000012: regulation of auxin polar transport	2.64E-03
40	GO:0010020: chloroplast fission	2.87E-03
41	GO:0090351: seedling development	3.09E-03
42	GO:0051321: meiotic cell cycle	4.08E-03
43	GO:0008380: RNA splicing	5.00E-03
44	GO:0006457: protein folding	5.25E-03
45	GO:0008033: tRNA processing	5.43E-03
46	GO:0007059: chromosome segregation	6.01E-03
47	GO:0009791: post-embryonic development	6.31E-03
48	GO:0042254: ribosome biogenesis	6.60E-03
49	GO:0009793: embryo development ending in seed dormancy	6.75E-03
50	GO:0032502: developmental process	6.92E-03
51	GO:0080167: response to karrikin	8.04E-03
52	GO:0006888: ER to Golgi vesicle-mediated transport	9.57E-03
53	GO:0009637: response to blue light	1.22E-02
54	GO:0030001: metal ion transport	1.33E-02
55	GO:0010114: response to red light	1.45E-02
56	GO:0045893: positive regulation of transcription, DNA-templated	2.43E-02
57	GO:0042744: hydrogen peroxide catabolic process	2.97E-02
58	GO:0006508: proteolysis	3.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0003723: RNA binding	1.86E-06
3	GO:0016851: magnesium chelatase activity	2.19E-06
4	GO:0001053: plastid sigma factor activity	4.21E-06
5	GO:0016987: sigma factor activity	4.21E-06
6	GO:0019843: rRNA binding	2.25E-05
7	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	6.42E-05
8	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	6.42E-05
9	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.42E-05
10	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.23E-04
11	GO:0016630: protochlorophyllide reductase activity	1.55E-04
12	GO:0000774: adenyl-nucleotide exchange factor activity	1.55E-04
13	GO:0005528: FK506 binding	1.75E-04
14	GO:0051087: chaperone binding	1.95E-04
15	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	2.63E-04
16	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	2.63E-04
17	GO:0043495: protein anchor	5.10E-04
18	GO:0004045: aminoacyl-tRNA hydrolase activity	5.10E-04
19	GO:0003959: NADPH dehydrogenase activity	6.45E-04
20	GO:0003735: structural constituent of ribosome	1.24E-03
21	GO:0004033: aldo-keto reductase (NADP) activity	1.26E-03
22	GO:0008312: 7S RNA binding	1.26E-03
23	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.73E-03
24	GO:0047617: acyl-CoA hydrolase activity	1.81E-03
25	GO:0004519: endonuclease activity	2.04E-03
26	GO:0051082: unfolded protein binding	2.45E-03
27	GO:0008266: poly(U) RNA binding	2.87E-03
28	GO:0003727: single-stranded RNA binding	4.87E-03
29	GO:0008080: N-acetyltransferase activity	5.72E-03
30	GO:0010181: FMN binding	6.01E-03
31	GO:0004601: peroxidase activity	6.48E-03
32	GO:0008483: transaminase activity	7.88E-03
33	GO:0008236: serine-type peptidase activity	9.93E-03
34	GO:0051539: 4 iron, 4 sulfur cluster binding	1.33E-02
35	GO:0003729: mRNA binding	1.54E-02
36	GO:0003690: double-stranded DNA binding	1.84E-02
37	GO:0016887: ATPase activity	1.85E-02
38	GO:0030170: pyridoxal phosphate binding	2.92E-02
39	GO:0005507: copper ion binding	3.01E-02
40	GO:0008168: methyltransferase activity	4.52E-02
41	GO:0000287: magnesium ion binding	4.58E-02
42	GO:0016788: hydrolase activity, acting on ester bonds	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009515: granal stacked thylakoid	0.00E+00
2	GO:0009507: chloroplast	1.88E-34
3	GO:0009570: chloroplast stroma	1.72E-22
4	GO:0009941: chloroplast envelope	8.06E-11
5	GO:0009579: thylakoid	4.75E-08
6	GO:0009535: chloroplast thylakoid membrane	5.35E-08
7	GO:0010007: magnesium chelatase complex	9.10E-07
8	GO:0009534: chloroplast thylakoid	1.36E-05
9	GO:0009543: chloroplast thylakoid lumen	2.25E-05
10	GO:0005840: ribosome	6.03E-05
11	GO:0009547: plastid ribosome	6.42E-05
12	GO:0031977: thylakoid lumen	8.75E-05
13	GO:0080085: signal recognition particle, chloroplast targeting	1.55E-04
14	GO:0009526: plastid envelope	5.10E-04
15	GO:0005828: kinetochore microtubule	5.10E-04
16	GO:0000776: kinetochore	6.45E-04
17	GO:0055035: plastid thylakoid membrane	6.45E-04
18	GO:0000777: condensed chromosome kinetochore	9.40E-04
19	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.44E-03
20	GO:0005876: spindle microtubule	1.81E-03
21	GO:0043231: intracellular membrane-bounded organelle	2.08E-03
22	GO:0090404: pollen tube tip	2.21E-03
23	GO:0000311: plastid large ribosomal subunit	2.42E-03
24	GO:0030095: chloroplast photosystem II	2.87E-03
25	GO:0043234: protein complex	3.33E-03
26	GO:0042651: thylakoid membrane	3.82E-03
27	GO:0009654: photosystem II oxygen evolving complex	3.82E-03
28	GO:0005759: mitochondrial matrix	3.82E-03
29	GO:0015935: small ribosomal subunit	4.08E-03
30	GO:0019898: extrinsic component of membrane	6.31E-03
31	GO:0009295: nucleoid	7.88E-03
32	GO:0030529: intracellular ribonucleoprotein complex	8.54E-03
33	GO:0009706: chloroplast inner membrane	2.31E-02
34	GO:0009524: phragmoplast	2.81E-02
35	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02