Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G35140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006971: hypotonic response0.00E+00
2GO:0034484: raffinose catabolic process0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
5GO:0010200: response to chitin2.04E-08
6GO:0010411: xyloglucan metabolic process6.45E-06
7GO:0009751: response to salicylic acid1.87E-05
8GO:0010438: cellular response to sulfur starvation2.12E-05
9GO:0009741: response to brassinosteroid4.82E-05
10GO:0010439: regulation of glucosinolate biosynthetic process7.88E-05
11GO:0080164: regulation of nitric oxide metabolic process1.23E-04
12GO:0055063: sulfate ion homeostasis1.23E-04
13GO:0046500: S-adenosylmethionine metabolic process1.23E-04
14GO:0009962: regulation of flavonoid biosynthetic process1.23E-04
15GO:2000029: regulation of proanthocyanidin biosynthetic process1.23E-04
16GO:0050691: regulation of defense response to virus by host1.23E-04
17GO:0033481: galacturonate biosynthetic process1.23E-04
18GO:0009718: anthocyanin-containing compound biosynthetic process2.71E-04
19GO:2000693: positive regulation of seed maturation2.86E-04
20GO:0031542: positive regulation of anthocyanin biosynthetic process2.86E-04
21GO:0071497: cellular response to freezing2.86E-04
22GO:0051592: response to calcium ion2.86E-04
23GO:0042546: cell wall biogenesis3.51E-04
24GO:0019419: sulfate reduction4.72E-04
25GO:0010581: regulation of starch biosynthetic process4.72E-04
26GO:0080168: abscisic acid transport4.72E-04
27GO:0030154: cell differentiation4.96E-04
28GO:2000022: regulation of jasmonic acid mediated signaling pathway5.65E-04
29GO:0046777: protein autophosphorylation6.45E-04
30GO:0019722: calcium-mediated signaling6.66E-04
31GO:1902358: sulfate transmembrane transport6.76E-04
32GO:0006355: regulation of transcription, DNA-templated7.45E-04
33GO:0000271: polysaccharide biosynthetic process7.76E-04
34GO:0046345: abscisic acid catabolic process8.97E-04
35GO:0006544: glycine metabolic process1.13E-03
36GO:0009753: response to jasmonic acid1.16E-03
37GO:0009828: plant-type cell wall loosening1.22E-03
38GO:0007267: cell-cell signaling1.30E-03
39GO:0009267: cellular response to starvation1.39E-03
40GO:0060918: auxin transport1.39E-03
41GO:1902456: regulation of stomatal opening1.39E-03
42GO:0006563: L-serine metabolic process1.39E-03
43GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.53E-03
44GO:0009873: ethylene-activated signaling pathway1.53E-03
45GO:0006357: regulation of transcription from RNA polymerase II promoter1.59E-03
46GO:0009612: response to mechanical stimulus1.66E-03
47GO:0048573: photoperiodism, flowering1.70E-03
48GO:0009737: response to abscisic acid1.87E-03
49GO:0050829: defense response to Gram-negative bacterium1.95E-03
50GO:0051510: regulation of unidimensional cell growth1.95E-03
51GO:0010038: response to metal ion1.95E-03
52GO:0035265: organ growth2.26E-03
53GO:0030162: regulation of proteolysis2.26E-03
54GO:2000070: regulation of response to water deprivation2.26E-03
55GO:0009738: abscisic acid-activated signaling pathway2.36E-03
56GO:0009826: unidimensional cell growth2.48E-03
57GO:2000031: regulation of salicylic acid mediated signaling pathway2.58E-03
58GO:0010099: regulation of photomorphogenesis2.58E-03
59GO:0048574: long-day photoperiodism, flowering2.58E-03
60GO:0044030: regulation of DNA methylation2.58E-03
61GO:0019432: triglyceride biosynthetic process2.91E-03
62GO:0051865: protein autoubiquitination2.91E-03
63GO:0042542: response to hydrogen peroxide2.94E-03
64GO:0009723: response to ethylene3.13E-03
65GO:0009638: phototropism3.26E-03
66GO:0035999: tetrahydrofolate interconversion3.26E-03
67GO:0000103: sulfate assimilation3.62E-03
68GO:0043069: negative regulation of programmed cell death3.62E-03
69GO:0006351: transcription, DNA-templated3.68E-03
70GO:0031347: regulation of defense response3.69E-03
71GO:0016567: protein ubiquitination3.77E-03
72GO:0010015: root morphogenesis4.00E-03
73GO:0000038: very long-chain fatty acid metabolic process4.00E-03
74GO:1903507: negative regulation of nucleic acid-templated transcription4.00E-03
75GO:0000272: polysaccharide catabolic process4.00E-03
76GO:0009585: red, far-red light phototransduction4.11E-03
77GO:0045454: cell redox homeostasis4.29E-03
78GO:0016925: protein sumoylation4.39E-03
79GO:0018107: peptidyl-threonine phosphorylation4.79E-03
80GO:0010540: basipetal auxin transport5.20E-03
81GO:0034605: cellular response to heat5.20E-03
82GO:0002237: response to molecule of bacterial origin5.20E-03
83GO:0009969: xyloglucan biosynthetic process5.63E-03
84GO:0009225: nucleotide-sugar metabolic process5.63E-03
85GO:0005985: sucrose metabolic process5.63E-03
86GO:0006636: unsaturated fatty acid biosynthetic process6.06E-03
87GO:0009742: brassinosteroid mediated signaling pathway6.18E-03
88GO:0006487: protein N-linked glycosylation6.51E-03
89GO:0019344: cysteine biosynthetic process6.51E-03
90GO:2000377: regulation of reactive oxygen species metabolic process6.51E-03
91GO:0019953: sexual reproduction6.98E-03
92GO:0010026: trichome differentiation6.98E-03
93GO:0009414: response to water deprivation6.99E-03
94GO:0016998: cell wall macromolecule catabolic process7.45E-03
95GO:0010017: red or far-red light signaling pathway7.93E-03
96GO:0009831: plant-type cell wall modification involved in multidimensional cell growth8.43E-03
97GO:0040007: growth8.43E-03
98GO:0009733: response to auxin8.64E-03
99GO:0010214: seed coat development8.93E-03
100GO:0010118: stomatal movement9.99E-03
101GO:0048653: anther development9.99E-03
102GO:0010268: brassinosteroid homeostasis1.05E-02
103GO:0045489: pectin biosynthetic process1.05E-02
104GO:0009958: positive gravitropism1.05E-02
105GO:0009646: response to absence of light1.11E-02
106GO:0009739: response to gibberellin1.13E-02
107GO:0009791: post-embryonic development1.16E-02
108GO:0016132: brassinosteroid biosynthetic process1.22E-02
109GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.22E-02
110GO:0002229: defense response to oomycetes1.22E-02
111GO:0035556: intracellular signal transduction1.24E-02
112GO:0010583: response to cyclopentenone1.28E-02
113GO:0045893: positive regulation of transcription, DNA-templated1.38E-02
114GO:0016125: sterol metabolic process1.40E-02
115GO:0019760: glucosinolate metabolic process1.40E-02
116GO:0009639: response to red or far red light1.40E-02
117GO:0009658: chloroplast organization1.56E-02
118GO:0006970: response to osmotic stress1.69E-02
119GO:0048366: leaf development1.84E-02
120GO:0016049: cell growth1.85E-02
121GO:0048767: root hair elongation1.98E-02
122GO:0009813: flavonoid biosynthetic process1.98E-02
123GO:0010218: response to far red light2.05E-02
124GO:0048527: lateral root development2.12E-02
125GO:0010119: regulation of stomatal movement2.12E-02
126GO:0009637: response to blue light2.26E-02
127GO:0009867: jasmonic acid mediated signaling pathway2.26E-02
128GO:0045087: innate immune response2.26E-02
129GO:0016051: carbohydrate biosynthetic process2.26E-02
130GO:0010114: response to red light2.71E-02
131GO:0071555: cell wall organization2.82E-02
132GO:0042742: defense response to bacterium2.82E-02
133GO:0006979: response to oxidative stress2.85E-02
134GO:0006855: drug transmembrane transport3.03E-02
135GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.11E-02
136GO:0009664: plant-type cell wall organization3.19E-02
137GO:0006486: protein glycosylation3.35E-02
138GO:0009909: regulation of flower development3.60E-02
139GO:0048316: seed development3.86E-02
140GO:0009409: response to cold4.10E-02
141GO:0009651: response to salt stress4.38E-02
142GO:0018105: peptidyl-serine phosphorylation4.40E-02
143GO:0046686: response to cadmium ion4.87E-02
RankGO TermAdjusted P value
1GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0016762: xyloglucan:xyloglucosyl transferase activity6.69E-05
4GO:0043565: sequence-specific DNA binding8.72E-05
5GO:0080132: fatty acid alpha-hydroxylase activity1.23E-04
6GO:0090440: abscisic acid transporter activity1.23E-04
7GO:0016798: hydrolase activity, acting on glycosyl bonds1.47E-04
8GO:0003700: transcription factor activity, sequence-specific DNA binding2.77E-04
9GO:0033741: adenylyl-sulfate reductase (glutathione) activity2.86E-04
10GO:0050736: O-malonyltransferase activity2.86E-04
11GO:0009973: adenylyl-sulfate reductase activity2.86E-04
12GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity2.86E-04
13GO:0044212: transcription regulatory region DNA binding4.16E-04
14GO:0052692: raffinose alpha-galactosidase activity4.72E-04
15GO:0010295: (+)-abscisic acid 8'-hydroxylase activity4.72E-04
16GO:0033843: xyloglucan 6-xylosyltransferase activity6.76E-04
17GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity6.76E-04
18GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.65E-04
19GO:0050378: UDP-glucuronate 4-epimerase activity8.97E-04
20GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.98E-04
21GO:0004372: glycine hydroxymethyltransferase activity1.13E-03
22GO:0031386: protein tag1.13E-03
23GO:0035252: UDP-xylosyltransferase activity1.39E-03
24GO:0010427: abscisic acid binding1.39E-03
25GO:0016161: beta-amylase activity1.66E-03
26GO:0008271: secondary active sulfate transmembrane transporter activity2.58E-03
27GO:0004842: ubiquitin-protein transferase activity3.12E-03
28GO:0004674: protein serine/threonine kinase activity3.19E-03
29GO:0004672: protein kinase activity3.47E-03
30GO:0004864: protein phosphatase inhibitor activity3.62E-03
31GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.79E-03
32GO:0015116: sulfate transmembrane transporter activity4.39E-03
33GO:0000976: transcription regulatory region sequence-specific DNA binding4.39E-03
34GO:0031625: ubiquitin protein ligase binding4.54E-03
35GO:0003712: transcription cofactor activity5.63E-03
36GO:0003677: DNA binding5.67E-03
37GO:0003714: transcription corepressor activity6.51E-03
38GO:0016758: transferase activity, transferring hexosyl groups7.11E-03
39GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity7.93E-03
40GO:0004402: histone acetyltransferase activity9.99E-03
41GO:0001085: RNA polymerase II transcription factor binding1.05E-02
42GO:0050662: coenzyme binding1.11E-02
43GO:0004872: receptor activity1.16E-02
44GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.34E-02
45GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.46E-02
46GO:0016740: transferase activity1.49E-02
47GO:0016757: transferase activity, transferring glycosyl groups1.49E-02
48GO:0008375: acetylglucosaminyltransferase activity1.71E-02
49GO:0009931: calcium-dependent protein serine/threonine kinase activity1.71E-02
50GO:0015238: drug transmembrane transporter activity1.98E-02
51GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.12E-02
52GO:0004871: signal transducer activity2.44E-02
53GO:0015293: symporter activity2.95E-02
54GO:0003824: catalytic activity3.17E-02
55GO:0005515: protein binding3.36E-02
56GO:0016298: lipase activity3.44E-02
57GO:0045735: nutrient reservoir activity3.78E-02
58GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.86E-02
59GO:0046983: protein dimerization activity4.04E-02
60GO:0016301: kinase activity4.19E-02
61GO:0015035: protein disulfide oxidoreductase activity4.40E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0042406: extrinsic component of endoplasmic reticulum membrane4.72E-04
3GO:0048046: apoplast1.64E-03
4GO:0015629: actin cytoskeleton8.43E-03
5GO:0005794: Golgi apparatus8.68E-03
6GO:0005770: late endosome1.05E-02
7GO:0005615: extracellular space1.13E-02
8GO:0032580: Golgi cisterna membrane1.40E-02
9GO:0005667: transcription factor complex1.71E-02
10GO:0019005: SCF ubiquitin ligase complex1.91E-02
11GO:0005618: cell wall1.94E-02
12GO:0031902: late endosome membrane2.56E-02
13GO:0009506: plasmodesma2.60E-02
14GO:0009505: plant-type cell wall3.73E-02
15GO:0005887: integral component of plasma membrane3.88E-02
Gene type



Gene DE type