co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G34320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
2	GO:0048867: stem cell fate determination	0.00E+00
3	GO:0016197: endosomal transport	5.10E-05
4	GO:0035542: regulation of SNARE complex assembly	5.10E-05
5	GO:0032012: regulation of ARF protein signal transduction	9.05E-05
6	GO:0080119: ER body organization	1.36E-04
7	GO:0006882: cellular zinc ion homeostasis	1.36E-04
8	GO:0006878: cellular copper ion homeostasis	1.86E-04
9	GO:0006646: phosphatidylethanolamine biosynthetic process	1.86E-04
10	GO:1990937: xylan acetylation	1.86E-04
11	GO:0006897: endocytosis	2.83E-04
12	GO:0045491: xylan metabolic process	2.97E-04
13	GO:0006875: cellular metal ion homeostasis	4.84E-04
14	GO:0009742: brassinosteroid mediated signaling pathway	6.14E-04
15	GO:0006298: mismatch repair	7.62E-04
16	GO:0010152: pollen maturation	9.12E-04
17	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.12E-04
18	GO:0010102: lateral root morphogenesis	9.90E-04
19	GO:0007033: vacuole organization	1.15E-03
20	GO:0042023: DNA endoreduplication	1.23E-03
21	GO:0006289: nucleotide-excision repair	1.32E-03
22	GO:0010073: meristem maintenance	1.41E-03
23	GO:0016575: histone deacetylation	1.41E-03
24	GO:0006874: cellular calcium ion homeostasis	1.41E-03
25	GO:0006970: response to osmotic stress	1.59E-03
26	GO:0045492: xylan biosynthetic process	1.78E-03
27	GO:0000413: protein peptidyl-prolyl isomerization	1.98E-03
28	GO:0006886: intracellular protein transport	2.24E-03
29	GO:0008654: phospholipid biosynthetic process	2.29E-03
30	GO:0051607: defense response to virus	2.95E-03
31	GO:0009816: defense response to bacterium, incompatible interaction	3.19E-03
32	GO:0048573: photoperiodism, flowering	3.43E-03
33	GO:0008219: cell death	3.68E-03
34	GO:0006499: N-terminal protein myristoylation	3.93E-03
35	GO:0009834: plant-type secondary cell wall biogenesis	3.93E-03
36	GO:0006811: ion transport	3.93E-03
37	GO:0009846: pollen germination	6.00E-03
38	GO:0006396: RNA processing	8.22E-03
39	GO:0000398: mRNA splicing, via spliceosome	8.90E-03
40	GO:0009790: embryo development	1.05E-02
41	GO:0016036: cellular response to phosphate starvation	1.12E-02
42	GO:0008380: RNA splicing	1.34E-02
43	GO:0007165: signal transduction	1.99E-02
44	GO:0045892: negative regulation of transcription, DNA-templated	2.15E-02
45	GO:0016310: phosphorylation	2.34E-02
46	GO:0006397: mRNA processing	2.55E-02
47	GO:0009738: abscisic acid-activated signaling pathway	3.64E-02
48	GO:0006457: protein folding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0019888: protein phosphatase regulator activity	1.86E-05
2	GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding	1.97E-05
3	GO:0030371: translation repressor activity	1.97E-05
4	GO:0004609: phosphatidylserine decarboxylase activity	5.10E-05
5	GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	5.10E-05
6	GO:0019829: cation-transporting ATPase activity	9.05E-05
7	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.86E-04
8	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.57E-04
9	GO:0004525: ribonuclease III activity	4.84E-04
10	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.50E-04
11	GO:0005388: calcium-transporting ATPase activity	9.90E-04
12	GO:0004407: histone deacetylase activity	1.32E-03
13	GO:0043424: protein histidine kinase binding	1.41E-03
14	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.50E-03
15	GO:0003684: damaged DNA binding	2.73E-03
16	GO:0003697: single-stranded DNA binding	4.32E-03
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.71E-03
18	GO:0003779: actin binding	7.89E-03
19	GO:0008026: ATP-dependent helicase activity	8.39E-03
20	GO:0004386: helicase activity	8.56E-03
21	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.60E-03
22	GO:0003729: mRNA binding	1.42E-02
23	GO:0003682: chromatin binding	1.67E-02
24	GO:0004497: monooxygenase activity	1.87E-02
25	GO:0004722: protein serine/threonine phosphatase activity	2.28E-02
26	GO:0008289: lipid binding	3.13E-02
27	GO:0016740: transferase activity	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0071942: XPC complex	0.00E+00
2	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
3	GO:0000159: protein phosphatase type 2A complex	1.33E-05
4	GO:0030897: HOPS complex	5.10E-05
5	GO:0000139: Golgi membrane	2.93E-04
6	GO:0016363: nuclear matrix	3.57E-04
7	GO:0030131: clathrin adaptor complex	4.84E-04
8	GO:0030125: clathrin vesicle coat	7.62E-04
9	GO:0005765: lysosomal membrane	8.37E-04
10	GO:0019013: viral nucleocapsid	9.90E-04
11	GO:0043234: protein complex	1.23E-03
12	GO:0005905: clathrin-coated pit	1.50E-03
13	GO:0030529: intracellular ribonucleoprotein complex	3.07E-03
14	GO:0015934: large ribosomal subunit	4.06E-03
15	GO:0031902: late endosome membrane	4.86E-03
16	GO:0005681: spliceosomal complex	7.08E-03
17	GO:0010008: endosome membrane	7.24E-03
18	GO:0005802: trans-Golgi network	7.52E-03
19	GO:0005768: endosome	8.55E-03
20	GO:0009705: plant-type vacuole membrane	1.18E-02
21	GO:0005789: endoplasmic reticulum membrane	1.46E-02
22	GO:0005794: Golgi apparatus	1.48E-02
23	GO:0005783: endoplasmic reticulum	1.60E-02
24	GO:0005887: integral component of plasma membrane	3.08E-02
25	GO:0005634: nucleus	3.61E-02
26	GO:0005777: peroxisome	4.11E-02