co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G33970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042906: xanthine transport	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0010219: regulation of vernalization response	0.00E+00
4	GO:0012502: induction of programmed cell death	0.00E+00
5	GO:0010478: chlororespiration	0.00E+00
6	GO:0044249: cellular biosynthetic process	0.00E+00
7	GO:0010378: temperature compensation of the circadian clock	0.00E+00
8	GO:0030644: cellular chloride ion homeostasis	0.00E+00
9	GO:0005997: xylulose metabolic process	0.00E+00
10	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
11	GO:0009409: response to cold	2.06E-07
12	GO:0009644: response to high light intensity	1.04E-06
13	GO:0009645: response to low light intensity stimulus	4.46E-06
14	GO:0009817: defense response to fungus, incompatible interaction	4.60E-06
15	GO:0007623: circadian rhythm	2.75E-05
16	GO:0010600: regulation of auxin biosynthetic process	5.29E-05
17	GO:0018298: protein-chromophore linkage	8.06E-05
18	GO:0010218: response to far red light	9.66E-05
19	GO:0009768: photosynthesis, light harvesting in photosystem I	1.12E-04
20	GO:0009269: response to desiccation	1.29E-04
21	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.67E-04
22	GO:0008643: carbohydrate transport	2.22E-04
23	GO:0010928: regulation of auxin mediated signaling pathway	2.76E-04
24	GO:0009415: response to water	2.76E-04
25	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	2.82E-04
26	GO:0080173: male-female gamete recognition during double fertilization	2.82E-04
27	GO:0015812: gamma-aminobutyric acid transport	2.82E-04
28	GO:0032958: inositol phosphate biosynthetic process	2.82E-04
29	GO:0006369: termination of RNA polymerase II transcription	2.82E-04
30	GO:0010286: heat acclimation	4.81E-04
31	GO:0030042: actin filament depolymerization	4.86E-04
32	GO:0015914: phospholipid transport	6.19E-04
33	GO:0015720: allantoin transport	6.19E-04
34	GO:0006883: cellular sodium ion homeostasis	6.19E-04
35	GO:0048833: specification of floral organ number	6.19E-04
36	GO:0015857: uracil transport	6.19E-04
37	GO:1902884: positive regulation of response to oxidative stress	6.19E-04
38	GO:0051170: nuclear import	6.19E-04
39	GO:0030003: cellular cation homeostasis	6.19E-04
40	GO:0009737: response to abscisic acid	8.02E-04
41	GO:0009631: cold acclimation	9.36E-04
42	GO:0030029: actin filament-based process	1.00E-03
43	GO:1902448: positive regulation of shade avoidance	1.00E-03
44	GO:0042344: indole glucosinolate catabolic process	1.00E-03
45	GO:1901562: response to paraquat	1.00E-03
46	GO:0071705: nitrogen compound transport	1.00E-03
47	GO:0009637: response to blue light	1.05E-03
48	GO:0009416: response to light stimulus	1.07E-03
49	GO:0009414: response to water deprivation	1.24E-03
50	GO:0042542: response to hydrogen peroxide	1.37E-03
51	GO:0006020: inositol metabolic process	1.44E-03
52	GO:0010601: positive regulation of auxin biosynthetic process	1.44E-03
53	GO:0015749: monosaccharide transport	1.44E-03
54	GO:1901332: negative regulation of lateral root development	1.44E-03
55	GO:0010114: response to red light	1.44E-03
56	GO:0048511: rhythmic process	1.58E-03
57	GO:0010017: red or far-red light signaling pathway	1.72E-03
58	GO:0071215: cellular response to abscisic acid stimulus	1.88E-03
59	GO:0006646: phosphatidylethanolamine biosynthetic process	1.92E-03
60	GO:0015743: malate transport	1.92E-03
61	GO:0048442: sepal development	1.92E-03
62	GO:0009765: photosynthesis, light harvesting	1.92E-03
63	GO:0022622: root system development	1.92E-03
64	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	1.92E-03
65	GO:1901002: positive regulation of response to salt stress	1.92E-03
66	GO:0030104: water homeostasis	1.92E-03
67	GO:0010508: positive regulation of autophagy	1.92E-03
68	GO:0009585: red, far-red light phototransduction	2.10E-03
69	GO:0051603: proteolysis involved in cellular protein catabolic process	2.19E-03
70	GO:0000380: alternative mRNA splicing, via spliceosome	2.46E-03
71	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.46E-03
72	GO:0006656: phosphatidylcholine biosynthetic process	2.46E-03
73	GO:0043097: pyrimidine nucleoside salvage	2.46E-03
74	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.46E-03
75	GO:0006814: sodium ion transport	2.77E-03
76	GO:1900425: negative regulation of defense response to bacterium	3.03E-03
77	GO:0006206: pyrimidine nucleobase metabolic process	3.03E-03
78	GO:0000741: karyogamy	3.03E-03
79	GO:0080167: response to karrikin	3.42E-03
80	GO:0019509: L-methionine salvage from methylthioadenosine	3.65E-03
81	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	3.65E-03
82	GO:0045926: negative regulation of growth	3.65E-03
83	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.65E-03
84	GO:0010044: response to aluminum ion	4.30E-03
85	GO:0032880: regulation of protein localization	4.30E-03
86	GO:0010161: red light signaling pathway	4.30E-03
87	GO:0098869: cellular oxidant detoxification	4.30E-03
88	GO:0048437: floral organ development	4.30E-03
89	GO:0009769: photosynthesis, light harvesting in photosystem II	4.30E-03
90	GO:0010038: response to metal ion	4.30E-03
91	GO:0009819: drought recovery	4.99E-03
92	GO:0006491: N-glycan processing	4.99E-03
93	GO:0009704: de-etiolation	4.99E-03
94	GO:0048573: photoperiodism, flowering	5.40E-03
95	GO:0010099: regulation of photomorphogenesis	5.72E-03
96	GO:0009827: plant-type cell wall modification	5.72E-03
97	GO:0001510: RNA methylation	5.72E-03
98	GO:0055085: transmembrane transport	6.16E-03
99	GO:0009408: response to heat	6.19E-03
100	GO:0000160: phosphorelay signal transduction system	6.29E-03
101	GO:0090333: regulation of stomatal closure	6.48E-03
102	GO:0046916: cellular transition metal ion homeostasis	6.48E-03
103	GO:0006811: ion transport	6.60E-03
104	GO:0009651: response to salt stress	6.90E-03
105	GO:0005982: starch metabolic process	7.28E-03
106	GO:0048354: mucilage biosynthetic process involved in seed coat development	7.28E-03
107	GO:0009641: shade avoidance	8.11E-03
108	GO:0055062: phosphate ion homeostasis	8.11E-03
109	GO:0048441: petal development	8.11E-03
110	GO:0010468: regulation of gene expression	8.27E-03
111	GO:0006816: calcium ion transport	8.97E-03
112	GO:0009682: induced systemic resistance	8.97E-03
113	GO:0052544: defense response by callose deposition in cell wall	8.97E-03
114	GO:0009640: photomorphogenesis	9.80E-03
115	GO:0016925: protein sumoylation	9.88E-03
116	GO:0050826: response to freezing	1.08E-02
117	GO:0009718: anthocyanin-containing compound biosynthetic process	1.08E-02
118	GO:2000012: regulation of auxin polar transport	1.08E-02
119	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.08E-02
120	GO:0009266: response to temperature stimulus	1.18E-02
121	GO:0048440: carpel development	1.18E-02
122	GO:0007034: vacuolar transport	1.18E-02
123	GO:0007015: actin filament organization	1.18E-02
124	GO:0000165: MAPK cascade	1.19E-02
125	GO:0019853: L-ascorbic acid biosynthetic process	1.28E-02
126	GO:0071732: cellular response to nitric oxide	1.28E-02
127	GO:0090351: seedling development	1.28E-02
128	GO:0016575: histone deacetylation	1.59E-02
129	GO:0006874: cellular calcium ion homeostasis	1.59E-02
130	GO:0009695: jasmonic acid biosynthetic process	1.59E-02
131	GO:0035556: intracellular signal transduction	1.60E-02
132	GO:0044550: secondary metabolite biosynthetic process	1.68E-02
133	GO:0010431: seed maturation	1.70E-02
134	GO:0003333: amino acid transmembrane transport	1.70E-02
135	GO:0015979: photosynthesis	1.79E-02
136	GO:0007165: signal transduction	1.80E-02
137	GO:0019748: secondary metabolic process	1.81E-02
138	GO:0009553: embryo sac development	1.83E-02
139	GO:0006012: galactose metabolic process	1.93E-02
140	GO:0009693: ethylene biosynthetic process	1.93E-02
141	GO:0071369: cellular response to ethylene stimulus	1.93E-02
142	GO:0045892: negative regulation of transcription, DNA-templated	1.94E-02
143	GO:0048443: stamen development	2.05E-02
144	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.17E-02
145	GO:0008284: positive regulation of cell proliferation	2.17E-02
146	GO:0042631: cellular response to water deprivation	2.29E-02
147	GO:0000226: microtubule cytoskeleton organization	2.29E-02
148	GO:0046323: glucose import	2.42E-02
149	GO:0009958: positive gravitropism	2.42E-02
150	GO:0010197: polar nucleus fusion	2.42E-02
151	GO:0042752: regulation of circadian rhythm	2.54E-02
152	GO:0009556: microsporogenesis	2.67E-02
153	GO:0008654: phospholipid biosynthetic process	2.67E-02
154	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.81E-02
155	GO:0006635: fatty acid beta-oxidation	2.81E-02
156	GO:0006413: translational initiation	3.05E-02
157	GO:1901657: glycosyl compound metabolic process	3.08E-02
158	GO:0071281: cellular response to iron ion	3.08E-02
159	GO:0009567: double fertilization forming a zygote and endosperm	3.22E-02
160	GO:0019760: glucosinolate metabolic process	3.22E-02
161	GO:0006914: autophagy	3.22E-02
162	GO:0010228: vegetative to reproductive phase transition of meristem	3.42E-02
163	GO:0016126: sterol biosynthetic process	3.65E-02
164	GO:0009911: positive regulation of flower development	3.65E-02
165	GO:0010029: regulation of seed germination	3.80E-02
166	GO:0015995: chlorophyll biosynthetic process	4.10E-02
167	GO:0006950: response to stress	4.10E-02
168	GO:0042742: defense response to bacterium	4.17E-02
169	GO:0006979: response to oxidative stress	4.22E-02
170	GO:0009908: flower development	4.44E-02
171	GO:0009735: response to cytokinin	4.50E-02
172	GO:0006355: regulation of transcription, DNA-templated	4.66E-02
173	GO:0009738: abscisic acid-activated signaling pathway	4.82E-02
174	GO:0010043: response to zinc ion	4.88E-02
175	GO:0048527: lateral root development	4.88E-02
176	GO:0006952: defense response	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
4	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
5	GO:0005272: sodium channel activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
8	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
9	GO:0080082: esculin beta-glucosidase activity	0.00E+00
10	GO:0004567: beta-mannosidase activity	0.00E+00
11	GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity	0.00E+00
12	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
13	GO:0005253: anion channel activity	5.29E-05
14	GO:0031409: pigment binding	8.19E-05
15	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.82E-04
16	GO:0009679: hexose:proton symporter activity	2.82E-04
17	GO:0000829: inositol heptakisphosphate kinase activity	2.82E-04
18	GO:0010013: N-1-naphthylphthalamic acid binding	2.82E-04
19	GO:0080079: cellobiose glucosidase activity	2.82E-04
20	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.82E-04
21	GO:0046870: cadmium ion binding	2.82E-04
22	GO:0000828: inositol hexakisphosphate kinase activity	2.82E-04
23	GO:0004856: xylulokinase activity	2.82E-04
24	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.82E-04
25	GO:0070006: metalloaminopeptidase activity	2.82E-04
26	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.82E-04
27	GO:0030275: LRR domain binding	2.82E-04
28	GO:0016168: chlorophyll binding	6.00E-04
29	GO:0032791: lead ion binding	6.19E-04
30	GO:0005274: allantoin uptake transmembrane transporter activity	6.19E-04
31	GO:0004609: phosphatidylserine decarboxylase activity	6.19E-04
32	GO:0047216: inositol 3-alpha-galactosyltransferase activity	6.19E-04
33	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	6.19E-04
34	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	6.19E-04
35	GO:0015180: L-alanine transmembrane transporter activity	6.19E-04
36	GO:0001047: core promoter binding	6.19E-04
37	GO:0004177: aminopeptidase activity	6.54E-04
38	GO:0019948: SUMO activating enzyme activity	1.00E-03
39	GO:0017150: tRNA dihydrouridine synthase activity	1.00E-03
40	GO:0015144: carbohydrate transmembrane transporter activity	1.02E-03
41	GO:0005351: sugar:proton symporter activity	1.22E-03
42	GO:0004300: enoyl-CoA hydratase activity	1.44E-03
43	GO:0015189: L-lysine transmembrane transporter activity	1.44E-03
44	GO:0000254: C-4 methylsterol oxidase activity	1.44E-03
45	GO:0015181: arginine transmembrane transporter activity	1.44E-03
46	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.44E-03
47	GO:0004707: MAP kinase activity	1.58E-03
48	GO:0015210: uracil transmembrane transporter activity	1.92E-03
49	GO:0005313: L-glutamate transmembrane transporter activity	1.92E-03
50	GO:0008526: phosphatidylinositol transporter activity	1.92E-03
51	GO:0042277: peptide binding	1.92E-03
52	GO:0015145: monosaccharide transmembrane transporter activity	2.46E-03
53	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.46E-03
54	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.46E-03
55	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.46E-03
56	GO:0005247: voltage-gated chloride channel activity	3.03E-03
57	GO:2001070: starch binding	3.03E-03
58	GO:0004629: phospholipase C activity	3.03E-03
59	GO:0015562: efflux transmembrane transporter activity	3.03E-03
60	GO:0019137: thioglucosidase activity	3.03E-03
61	GO:0000293: ferric-chelate reductase activity	3.03E-03
62	GO:0004197: cysteine-type endopeptidase activity	3.39E-03
63	GO:0000156: phosphorelay response regulator activity	3.62E-03
64	GO:0004849: uridine kinase activity	3.65E-03
65	GO:0005261: cation channel activity	3.65E-03
66	GO:0004602: glutathione peroxidase activity	3.65E-03
67	GO:0004435: phosphatidylinositol phospholipase C activity	3.65E-03
68	GO:0009881: photoreceptor activity	4.30E-03
69	GO:0015140: malate transmembrane transporter activity	4.30E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	4.99E-03
71	GO:0004525: ribonuclease III activity	4.99E-03
72	GO:0102483: scopolin beta-glucosidase activity	5.40E-03
73	GO:0005267: potassium channel activity	5.72E-03
74	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.72E-03
75	GO:0001104: RNA polymerase II transcription cofactor activity	5.72E-03
76	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.48E-03
77	GO:0000989: transcription factor activity, transcription factor binding	6.48E-03
78	GO:0008422: beta-glucosidase activity	8.29E-03
79	GO:0047372: acylglycerol lipase activity	8.97E-03
80	GO:0005262: calcium channel activity	1.08E-02
81	GO:0004565: beta-galactosidase activity	1.08E-02
82	GO:0008081: phosphoric diester hydrolase activity	1.08E-02
83	GO:0005315: inorganic phosphate transmembrane transporter activity	1.08E-02
84	GO:0031624: ubiquitin conjugating enzyme binding	1.18E-02
85	GO:0008083: growth factor activity	1.18E-02
86	GO:0003712: transcription cofactor activity	1.28E-02
87	GO:0004970: ionotropic glutamate receptor activity	1.28E-02
88	GO:0005217: intracellular ligand-gated ion channel activity	1.28E-02
89	GO:0046872: metal ion binding	1.36E-02
90	GO:0008234: cysteine-type peptidase activity	1.47E-02
91	GO:0031625: ubiquitin protein ligase binding	1.47E-02
92	GO:0051536: iron-sulfur cluster binding	1.48E-02
93	GO:0004407: histone deacetylase activity	1.48E-02
94	GO:0051087: chaperone binding	1.59E-02
95	GO:0008324: cation transmembrane transporter activity	1.59E-02
96	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.70E-02
97	GO:0003779: actin binding	1.83E-02
98	GO:0022891: substrate-specific transmembrane transporter activity	1.93E-02
99	GO:0008514: organic anion transmembrane transporter activity	2.05E-02
100	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.10E-02
101	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.42E-02
102	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.43E-02
103	GO:0016853: isomerase activity	2.54E-02
104	GO:0008270: zinc ion binding	2.82E-02
105	GO:0015297: antiporter activity	3.12E-02
106	GO:0005200: structural constituent of cytoskeleton	3.36E-02
107	GO:0005509: calcium ion binding	3.72E-02
108	GO:0003743: translation initiation factor activity	3.81E-02
109	GO:0005506: iron ion binding	4.08E-02
110	GO:0030247: polysaccharide binding	4.10E-02
111	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.72E-02
112	GO:0003824: catalytic activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.04E-05
2	GO:0030076: light-harvesting complex	6.92E-05
3	GO:0005851: eukaryotic translation initiation factor 2B complex	1.22E-04
4	GO:0009522: photosystem I	2.87E-04
5	GO:0043036: starch grain	6.19E-04
6	GO:0010287: plastoglobule	7.21E-04
7	GO:0000151: ubiquitin ligase complex	7.82E-04
8	GO:0005764: lysosome	9.50E-04
9	GO:0000323: lytic vacuole	1.44E-03
10	GO:0005886: plasma membrane	1.66E-03
11	GO:0015629: actin cytoskeleton	1.88E-03
12	GO:0009898: cytoplasmic side of plasma membrane	1.92E-03
13	GO:0032586: protein storage vacuole membrane	1.92E-03
14	GO:0009517: PSII associated light-harvesting complex II	1.92E-03
15	GO:0009523: photosystem II	2.97E-03
16	GO:0034707: chloride channel complex	3.03E-03
17	GO:0070847: core mediator complex	3.03E-03
18	GO:0000815: ESCRT III complex	3.65E-03
19	GO:0009579: thylakoid	5.55E-03
20	GO:0000326: protein storage vacuole	5.72E-03
21	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	5.72E-03
22	GO:0031090: organelle membrane	6.48E-03
23	GO:0005615: extracellular space	7.61E-03
24	GO:0016020: membrane	8.50E-03
25	GO:0005622: intracellular	1.11E-02
26	GO:0031966: mitochondrial membrane	1.23E-02
27	GO:0005777: peroxisome	1.82E-02
28	GO:0031965: nuclear membrane	2.67E-02
29	GO:0016592: mediator complex	2.94E-02
30	GO:0009941: chloroplast envelope	3.54E-02
31	GO:0005783: endoplasmic reticulum	3.61E-02
32	GO:0005773: vacuole	4.50E-02
33	GO:0009507: chloroplast	4.84E-02