GO Enrichment Analysis of Co-expressed Genes with
AT1G32160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046677: response to antibiotic | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0048449: floral organ formation | 0.00E+00 |
| 4 | GO:0009661: chromoplast organization | 0.00E+00 |
| 5 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 6 | GO:0015970: guanosine tetraphosphate biosynthetic process | 0.00E+00 |
| 7 | GO:0090701: specification of plant organ identity | 0.00E+00 |
| 8 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 9 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 10 | GO:0050821: protein stabilization | 3.30E-05 |
| 11 | GO:0010206: photosystem II repair | 5.26E-05 |
| 12 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 7.07E-05 |
| 13 | GO:0006475: internal protein amino acid acetylation | 7.07E-05 |
| 14 | GO:0006474: N-terminal protein amino acid acetylation | 7.07E-05 |
| 15 | GO:0017198: N-terminal peptidyl-serine acetylation | 7.07E-05 |
| 16 | GO:0009688: abscisic acid biosynthetic process | 7.72E-05 |
| 17 | GO:0042548: regulation of photosynthesis, light reaction | 1.70E-04 |
| 18 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.70E-04 |
| 19 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.70E-04 |
| 20 | GO:0016122: xanthophyll metabolic process | 1.70E-04 |
| 21 | GO:0071712: ER-associated misfolded protein catabolic process | 1.70E-04 |
| 22 | GO:0009915: phloem sucrose loading | 1.70E-04 |
| 23 | GO:0032527: protein exit from endoplasmic reticulum | 1.70E-04 |
| 24 | GO:0015979: photosynthesis | 2.17E-04 |
| 25 | GO:0032940: secretion by cell | 2.86E-04 |
| 26 | GO:0005977: glycogen metabolic process | 2.86E-04 |
| 27 | GO:0010021: amylopectin biosynthetic process | 5.53E-04 |
| 28 | GO:0006661: phosphatidylinositol biosynthetic process | 5.53E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 7.00E-04 |
| 30 | GO:0010117: photoprotection | 7.00E-04 |
| 31 | GO:0016123: xanthophyll biosynthetic process | 7.00E-04 |
| 32 | GO:0015995: chlorophyll biosynthetic process | 8.34E-04 |
| 33 | GO:0000060: protein import into nucleus, translocation | 8.57E-04 |
| 34 | GO:0009643: photosynthetic acclimation | 8.57E-04 |
| 35 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 8.57E-04 |
| 36 | GO:0010077: maintenance of inflorescence meristem identity | 1.02E-03 |
| 37 | GO:0009723: response to ethylene | 1.21E-03 |
| 38 | GO:0009642: response to light intensity | 1.37E-03 |
| 39 | GO:0010114: response to red light | 1.47E-03 |
| 40 | GO:0009657: plastid organization | 1.56E-03 |
| 41 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.97E-03 |
| 42 | GO:0010629: negative regulation of gene expression | 2.19E-03 |
| 43 | GO:0015770: sucrose transport | 2.41E-03 |
| 44 | GO:0019684: photosynthesis, light reaction | 2.41E-03 |
| 45 | GO:0043085: positive regulation of catalytic activity | 2.41E-03 |
| 46 | GO:0030148: sphingolipid biosynthetic process | 2.41E-03 |
| 47 | GO:0018107: peptidyl-threonine phosphorylation | 2.88E-03 |
| 48 | GO:0009767: photosynthetic electron transport chain | 2.88E-03 |
| 49 | GO:0005985: sucrose metabolic process | 3.37E-03 |
| 50 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.63E-03 |
| 51 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.17E-03 |
| 52 | GO:0055114: oxidation-reduction process | 4.71E-03 |
| 53 | GO:0007623: circadian rhythm | 4.76E-03 |
| 54 | GO:0010150: leaf senescence | 4.76E-03 |
| 55 | GO:0035556: intracellular signal transduction | 4.77E-03 |
| 56 | GO:0010089: xylem development | 5.32E-03 |
| 57 | GO:0070417: cellular response to cold | 5.62E-03 |
| 58 | GO:0006662: glycerol ether metabolic process | 6.24E-03 |
| 59 | GO:0010182: sugar mediated signaling pathway | 6.24E-03 |
| 60 | GO:0019252: starch biosynthetic process | 6.89E-03 |
| 61 | GO:0008654: phospholipid biosynthetic process | 6.89E-03 |
| 62 | GO:0016032: viral process | 7.56E-03 |
| 63 | GO:0030163: protein catabolic process | 7.90E-03 |
| 64 | GO:0006970: response to osmotic stress | 7.93E-03 |
| 65 | GO:0009911: positive regulation of flower development | 9.34E-03 |
| 66 | GO:0016311: dephosphorylation | 1.09E-02 |
| 67 | GO:0010311: lateral root formation | 1.17E-02 |
| 68 | GO:0048527: lateral root development | 1.25E-02 |
| 69 | GO:0007568: aging | 1.25E-02 |
| 70 | GO:0006865: amino acid transport | 1.29E-02 |
| 71 | GO:0034599: cellular response to oxidative stress | 1.37E-02 |
| 72 | GO:0009651: response to salt stress | 1.44E-02 |
| 73 | GO:0009640: photomorphogenesis | 1.59E-02 |
| 74 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.82E-02 |
| 75 | GO:0000165: MAPK cascade | 1.82E-02 |
| 76 | GO:0009909: regulation of flower development | 2.11E-02 |
| 77 | GO:0006417: regulation of translation | 2.11E-02 |
| 78 | GO:0009624: response to nematode | 2.53E-02 |
| 79 | GO:0018105: peptidyl-serine phosphorylation | 2.58E-02 |
| 80 | GO:0006396: RNA processing | 2.58E-02 |
| 81 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.26E-02 |
| 82 | GO:0006413: translational initiation | 3.55E-02 |
| 83 | GO:0009739: response to gibberellin | 4.04E-02 |
| 84 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.81E-02 |
| 85 | GO:0006468: protein phosphorylation | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0004462: lactoylglutathione lyase activity | 1.28E-05 |
| 5 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.07E-05 |
| 6 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 7.07E-05 |
| 7 | GO:0052631: sphingolipid delta-8 desaturase activity | 7.07E-05 |
| 8 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 7.07E-05 |
| 9 | GO:1990189: peptide-serine-N-acetyltransferase activity | 7.07E-05 |
| 10 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 7.07E-05 |
| 11 | GO:0019172: glyoxalase III activity | 1.70E-04 |
| 12 | GO:0019156: isoamylase activity | 1.70E-04 |
| 13 | GO:0008728: GTP diphosphokinase activity | 1.70E-04 |
| 14 | GO:0044390: ubiquitin-like protein conjugating enzyme binding | 1.70E-04 |
| 15 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.86E-04 |
| 16 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 5.53E-04 |
| 17 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.00E-04 |
| 18 | GO:0016846: carbon-sulfur lyase activity | 7.00E-04 |
| 19 | GO:0004556: alpha-amylase activity | 8.57E-04 |
| 20 | GO:0004602: glutathione peroxidase activity | 1.02E-03 |
| 21 | GO:0008506: sucrose:proton symporter activity | 1.19E-03 |
| 22 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.56E-03 |
| 23 | GO:0071949: FAD binding | 1.76E-03 |
| 24 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 2.19E-03 |
| 25 | GO:0008047: enzyme activator activity | 2.19E-03 |
| 26 | GO:0008515: sucrose transmembrane transporter activity | 2.41E-03 |
| 27 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.88E-03 |
| 28 | GO:0016829: lyase activity | 3.74E-03 |
| 29 | GO:0008134: transcription factor binding | 3.89E-03 |
| 30 | GO:0004672: protein kinase activity | 4.12E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 5.32E-03 |
| 32 | GO:0047134: protein-disulfide reductase activity | 5.62E-03 |
| 33 | GO:0008080: N-acetyltransferase activity | 6.24E-03 |
| 34 | GO:0004791: thioredoxin-disulfide reductase activity | 6.56E-03 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 7.59E-03 |
| 36 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.90E-03 |
| 37 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 38 | GO:0003993: acid phosphatase activity | 1.37E-02 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.68E-02 |
| 40 | GO:0043621: protein self-association | 1.68E-02 |
| 41 | GO:0008289: lipid binding | 1.88E-02 |
| 42 | GO:0015171: amino acid transmembrane transporter activity | 2.11E-02 |
| 43 | GO:0031625: ubiquitin protein ligase binding | 2.11E-02 |
| 44 | GO:0016746: transferase activity, transferring acyl groups | 2.58E-02 |
| 45 | GO:0015035: protein disulfide oxidoreductase activity | 2.58E-02 |
| 46 | GO:0016787: hydrolase activity | 2.85E-02 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.02E-02 |
| 48 | GO:0004252: serine-type endopeptidase activity | 3.19E-02 |
| 49 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.25E-02 |
| 50 | GO:0015144: carbohydrate transmembrane transporter activity | 3.37E-02 |
| 51 | GO:0005351: sugar:proton symporter activity | 3.67E-02 |
| 52 | GO:0003743: translation initiation factor activity | 4.16E-02 |
| 53 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.38E-02 |
| 54 | GO:0008168: methyltransferase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 7.35E-09 |
| 3 | GO:0009507: chloroplast | 1.06E-07 |
| 4 | GO:0009941: chloroplast envelope | 3.10E-07 |
| 5 | GO:0031969: chloroplast membrane | 1.38E-05 |
| 6 | GO:0009534: chloroplast thylakoid | 1.95E-05 |
| 7 | GO:0009538: photosystem I reaction center | 3.30E-05 |
| 8 | GO:0031415: NatA complex | 1.70E-04 |
| 9 | GO:0009579: thylakoid | 1.73E-04 |
| 10 | GO:0042651: thylakoid membrane | 2.22E-04 |
| 11 | GO:0009706: chloroplast inner membrane | 2.93E-04 |
| 12 | GO:0009570: chloroplast stroma | 3.07E-04 |
| 13 | GO:0010287: plastoglobule | 3.66E-04 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 3.93E-04 |
| 15 | GO:0036513: Derlin-1 retrotranslocation complex | 4.15E-04 |
| 16 | GO:0009517: PSII associated light-harvesting complex II | 5.53E-04 |
| 17 | GO:0031977: thylakoid lumen | 1.36E-03 |
| 18 | GO:0009522: photosystem I | 6.56E-03 |
| 19 | GO:0005623: cell | 3.02E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 4.23E-02 |