co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000390: spliceosomal complex disassembly	0.00E+00
2	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
3	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
4	GO:0016236: macroautophagy	0.00E+00
5	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
6	GO:0010111: glyoxysome organization	0.00E+00
7	GO:0006635: fatty acid beta-oxidation	5.26E-05
8	GO:0090421: embryonic meristem initiation	1.10E-04
9	GO:0046167: glycerol-3-phosphate biosynthetic process	1.10E-04
10	GO:0009966: regulation of signal transduction	1.10E-04
11	GO:0015760: glucose-6-phosphate transport	1.10E-04
12	GO:0030242: pexophagy	1.10E-04
13	GO:0000303: response to superoxide	1.10E-04
14	GO:0007584: response to nutrient	2.57E-04
15	GO:0035542: regulation of SNARE complex assembly	2.57E-04
16	GO:0051258: protein polymerization	2.57E-04
17	GO:0016197: endosomal transport	2.57E-04
18	GO:0019395: fatty acid oxidation	2.57E-04
19	GO:0006641: triglyceride metabolic process	2.57E-04
20	GO:0007033: vacuole organization	2.94E-04
21	GO:2000377: regulation of reactive oxygen species metabolic process	3.65E-04
22	GO:0009695: jasmonic acid biosynthetic process	4.03E-04
23	GO:0015714: phosphoenolpyruvate transport	4.25E-04
24	GO:0019563: glycerol catabolic process	4.25E-04
25	GO:0035436: triose phosphate transmembrane transport	4.25E-04
26	GO:0006809: nitric oxide biosynthetic process	6.10E-04
27	GO:0051601: exocyst localization	6.10E-04
28	GO:0048194: Golgi vesicle budding	6.10E-04
29	GO:0006072: glycerol-3-phosphate metabolic process	6.10E-04
30	GO:0010107: potassium ion import	8.10E-04
31	GO:0015713: phosphoglycerate transport	8.10E-04
32	GO:0045324: late endosome to vacuole transport	8.10E-04
33	GO:0010188: response to microbial phytotoxin	8.10E-04
34	GO:0006542: glutamine biosynthetic process	8.10E-04
35	GO:0033320: UDP-D-xylose biosynthetic process	8.10E-04
36	GO:0006623: protein targeting to vacuole	8.23E-04
37	GO:0006891: intra-Golgi vesicle-mediated transport	8.78E-04
38	GO:0098719: sodium ion import across plasma membrane	1.02E-03
39	GO:0018344: protein geranylgeranylation	1.02E-03
40	GO:0006014: D-ribose metabolic process	1.25E-03
41	GO:0006751: glutathione catabolic process	1.25E-03
42	GO:0042732: D-xylose metabolic process	1.25E-03
43	GO:0034389: lipid particle organization	1.49E-03
44	GO:0048280: vesicle fusion with Golgi apparatus	1.49E-03
45	GO:0019509: L-methionine salvage from methylthioadenosine	1.49E-03
46	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.75E-03
47	GO:0006333: chromatin assembly or disassembly	1.75E-03
48	GO:0006401: RNA catabolic process	1.75E-03
49	GO:0006605: protein targeting	2.03E-03
50	GO:0048193: Golgi vesicle transport	2.32E-03
51	GO:0006972: hyperosmotic response	2.32E-03
52	GO:0009880: embryonic pattern specification	2.32E-03
53	GO:0060321: acceptance of pollen	2.32E-03
54	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.62E-03
55	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.62E-03
56	GO:0001708: cell fate specification	2.62E-03
57	GO:0009051: pentose-phosphate shunt, oxidative branch	2.62E-03
58	GO:0000209: protein polyubiquitination	2.72E-03
59	GO:0008202: steroid metabolic process	2.93E-03
60	GO:0051453: regulation of intracellular pH	2.93E-03
61	GO:0010018: far-red light signaling pathway	2.93E-03
62	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.16E-03
63	GO:0006896: Golgi to vacuole transport	3.25E-03
64	GO:0010629: negative regulation of gene expression	3.25E-03
65	GO:0009846: pollen germination	3.27E-03
66	GO:0006265: DNA topological change	3.59E-03
67	GO:0006886: intracellular protein transport	3.65E-03
68	GO:0010152: pollen maturation	3.93E-03
69	GO:0071365: cellular response to auxin stimulus	3.93E-03
70	GO:0012501: programmed cell death	3.93E-03
71	GO:0010102: lateral root morphogenesis	4.30E-03
72	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.30E-03
73	GO:0006006: glucose metabolic process	4.30E-03
74	GO:0055046: microgametogenesis	4.30E-03
75	GO:0006829: zinc II ion transport	4.30E-03
76	GO:0002237: response to molecule of bacterial origin	4.66E-03
77	GO:0048467: gynoecium development	4.66E-03
78	GO:0071732: cellular response to nitric oxide	5.04E-03
79	GO:0009225: nucleotide-sugar metabolic process	5.04E-03
80	GO:0018105: peptidyl-serine phosphorylation	5.13E-03
81	GO:0051726: regulation of cell cycle	5.28E-03
82	GO:0034976: response to endoplasmic reticulum stress	5.44E-03
83	GO:0042753: positive regulation of circadian rhythm	5.44E-03
84	GO:0000398: mRNA splicing, via spliceosome	5.74E-03
85	GO:0006979: response to oxidative stress	5.76E-03
86	GO:0006338: chromatin remodeling	5.84E-03
87	GO:0006468: protein phosphorylation	5.96E-03
88	GO:0006825: copper ion transport	6.25E-03
89	GO:0031408: oxylipin biosynthetic process	6.67E-03
90	GO:0030433: ubiquitin-dependent ERAD pathway	7.11E-03
91	GO:0071369: cellular response to ethylene stimulus	7.55E-03
92	GO:0006633: fatty acid biosynthetic process	7.82E-03
93	GO:0009561: megagametogenesis	8.00E-03
94	GO:0009306: protein secretion	8.00E-03
95	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.46E-03
96	GO:0042147: retrograde transport, endosome to Golgi	8.46E-03
97	GO:0010118: stomatal movement	8.93E-03
98	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.62E-03
99	GO:0006814: sodium ion transport	9.91E-03
100	GO:0042752: regulation of circadian rhythm	9.91E-03
101	GO:0007059: chromosome segregation	9.91E-03
102	GO:0035556: intracellular signal transduction	1.01E-02
103	GO:0019252: starch biosynthetic process	1.04E-02
104	GO:0010193: response to ozone	1.09E-02
105	GO:0016032: viral process	1.14E-02
106	GO:0009630: gravitropism	1.14E-02
107	GO:0007264: small GTPase mediated signal transduction	1.14E-02
108	GO:0071281: cellular response to iron ion	1.20E-02
109	GO:0009639: response to red or far red light	1.25E-02
110	GO:0006914: autophagy	1.25E-02
111	GO:0071805: potassium ion transmembrane transport	1.30E-02
112	GO:0006904: vesicle docking involved in exocytosis	1.30E-02
113	GO:0051607: defense response to virus	1.36E-02
114	GO:0006970: response to osmotic stress	1.44E-02
115	GO:0009816: defense response to bacterium, incompatible interaction	1.47E-02
116	GO:0042128: nitrate assimilation	1.53E-02
117	GO:0009723: response to ethylene	1.54E-02
118	GO:0006888: ER to Golgi vesicle-mediated transport	1.59E-02
119	GO:0046777: protein autophosphorylation	1.77E-02
120	GO:0006499: N-terminal protein myristoylation	1.83E-02
121	GO:0010119: regulation of stomatal movement	1.89E-02
122	GO:0009910: negative regulation of flower development	1.89E-02
123	GO:0009867: jasmonic acid mediated signaling pathway	2.02E-02
124	GO:0045087: innate immune response	2.02E-02
125	GO:0016051: carbohydrate biosynthetic process	2.02E-02
126	GO:0030001: metal ion transport	2.22E-02
127	GO:0009414: response to water deprivation	2.25E-02
128	GO:0006887: exocytosis	2.29E-02
129	GO:0006897: endocytosis	2.29E-02
130	GO:0006260: DNA replication	2.77E-02
131	GO:0031347: regulation of defense response	2.77E-02
132	GO:0042538: hyperosmotic salinity response	2.85E-02
133	GO:0009585: red, far-red light phototransduction	2.99E-02
134	GO:0051603: proteolysis involved in cellular protein catabolic process	3.07E-02
135	GO:0015031: protein transport	3.12E-02
136	GO:0009873: ethylene-activated signaling pathway	3.16E-02
137	GO:0048367: shoot system development	3.45E-02
138	GO:0009553: embryo sac development	3.77E-02
139	GO:0009624: response to nematode	3.85E-02
140	GO:0046686: response to cadmium ion	4.01E-02
141	GO:0009738: abscisic acid-activated signaling pathway	4.19E-02
142	GO:0009611: response to wounding	4.42E-02
143	GO:0009845: seed germination	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
2	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:1990446: U1 snRNP binding	0.00E+00
5	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
6	GO:0046522: S-methyl-5-thioribose kinase activity	0.00E+00
7	GO:0005548: phospholipid transporter activity	0.00E+00
8	GO:0004300: enoyl-CoA hydratase activity	5.58E-06
9	GO:0019707: protein-cysteine S-acyltransferase activity	1.10E-04
10	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.10E-04
11	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.30E-04
12	GO:0003988: acetyl-CoA C-acyltransferase activity	2.57E-04
13	GO:0019200: carbohydrate kinase activity	2.57E-04
14	GO:0015152: glucose-6-phosphate transmembrane transporter activity	2.57E-04
15	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.57E-04
16	GO:0004383: guanylate cyclase activity	4.25E-04
17	GO:0071917: triose-phosphate transmembrane transporter activity	4.25E-04
18	GO:0005093: Rab GDP-dissociation inhibitor activity	4.25E-04
19	GO:0004180: carboxypeptidase activity	4.25E-04
20	GO:0005047: signal recognition particle binding	4.25E-04
21	GO:0019829: cation-transporting ATPase activity	4.25E-04
22	GO:0030527: structural constituent of chromatin	6.10E-04
23	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.10E-04
24	GO:0001653: peptide receptor activity	6.10E-04
25	GO:0003729: mRNA binding	6.71E-04
26	GO:0005507: copper ion binding	7.25E-04
27	GO:0015120: phosphoglycerate transmembrane transporter activity	8.10E-04
28	GO:0003917: DNA topoisomerase type I activity	8.10E-04
29	GO:0004345: glucose-6-phosphate dehydrogenase activity	8.10E-04
30	GO:0017137: Rab GTPase binding	1.02E-03
31	GO:0005496: steroid binding	1.02E-03
32	GO:0004356: glutamate-ammonia ligase activity	1.02E-03
33	GO:0048040: UDP-glucuronate decarboxylase activity	1.25E-03
34	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.39E-03
35	GO:0004683: calmodulin-dependent protein kinase activity	1.46E-03
36	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.49E-03
37	GO:0004012: phospholipid-translocating ATPase activity	1.49E-03
38	GO:0004747: ribokinase activity	1.49E-03
39	GO:0003730: mRNA 3'-UTR binding	1.49E-03
40	GO:0070403: NAD+ binding	1.49E-03
41	GO:0005524: ATP binding	1.74E-03
42	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.03E-03
43	GO:0008865: fructokinase activity	2.03E-03
44	GO:0000149: SNARE binding	2.22E-03
45	GO:0005375: copper ion transmembrane transporter activity	2.32E-03
46	GO:0008142: oxysterol binding	2.32E-03
47	GO:0005267: potassium channel activity	2.32E-03
48	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.93E-03
49	GO:0004713: protein tyrosine kinase activity	3.25E-03
50	GO:0015386: potassium:proton antiporter activity	3.59E-03
51	GO:0005315: inorganic phosphate transmembrane transporter activity	4.30E-03
52	GO:0019888: protein phosphatase regulator activity	4.30E-03
53	GO:0031624: ubiquitin conjugating enzyme binding	4.66E-03
54	GO:0005515: protein binding	5.06E-03
55	GO:0043130: ubiquitin binding	5.84E-03
56	GO:0004176: ATP-dependent peptidase activity	6.67E-03
57	GO:0003756: protein disulfide isomerase activity	8.00E-03
58	GO:0016491: oxidoreductase activity	8.63E-03
59	GO:0046873: metal ion transmembrane transporter activity	9.41E-03
60	GO:0008536: Ran GTPase binding	9.41E-03
61	GO:0000166: nucleotide binding	9.47E-03
62	GO:0016853: isomerase activity	9.91E-03
63	GO:0004872: receptor activity	1.04E-02
64	GO:0004518: nuclease activity	1.14E-02
65	GO:0015385: sodium:proton antiporter activity	1.20E-02
66	GO:0008237: metallopeptidase activity	1.30E-02
67	GO:0003682: chromatin binding	1.41E-02
68	GO:0050660: flavin adenine dinucleotide binding	1.54E-02
69	GO:0005516: calmodulin binding	1.59E-02
70	GO:0008236: serine-type peptidase activity	1.65E-02
71	GO:0061630: ubiquitin protein ligase activity	1.74E-02
72	GO:0005096: GTPase activator activity	1.77E-02
73	GO:0004222: metalloendopeptidase activity	1.83E-02
74	GO:0050897: cobalt ion binding	1.89E-02
75	GO:0003746: translation elongation factor activity	2.02E-02
76	GO:0004674: protein serine/threonine kinase activity	2.13E-02
77	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.15E-02
78	GO:0050661: NADP binding	2.22E-02
79	GO:0005484: SNAP receptor activity	2.42E-02
80	GO:0035091: phosphatidylinositol binding	2.56E-02
81	GO:0009055: electron carrier activity	2.63E-02
82	GO:0008289: lipid binding	3.40E-02
83	GO:0016874: ligase activity	3.69E-02
84	GO:0004672: protein kinase activity	3.73E-02
85	GO:0003779: actin binding	3.77E-02
86	GO:0016887: ATPase activity	3.78E-02
87	GO:0003723: RNA binding	4.58E-02
88	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0005785: signal recognition particle receptor complex	0.00E+00
4	GO:0005684: U2-type spliceosomal complex	0.00E+00
5	GO:0071561: nucleus-vacuole junction	0.00E+00
6	GO:0005829: cytosol	6.15E-05
7	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	1.10E-04
8	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	1.10E-04
9	GO:0005768: endosome	2.36E-04
10	GO:0031902: late endosome membrane	2.42E-04
11	GO:0030897: HOPS complex	2.57E-04
12	GO:0005968: Rab-protein geranylgeranyltransferase complex	6.10E-04
13	GO:0005770: late endosome	7.18E-04
14	GO:0031298: replication fork protection complex	8.10E-04
15	GO:0005802: trans-Golgi network	8.91E-04
16	GO:0030140: trans-Golgi network transport vesicle	1.25E-03
17	GO:0016363: nuclear matrix	1.49E-03
18	GO:0030173: integral component of Golgi membrane	1.49E-03
19	GO:0005737: cytoplasm	1.77E-03
20	GO:0012507: ER to Golgi transport vesicle membrane	2.03E-03
21	GO:0030131: clathrin adaptor complex	2.03E-03
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.32E-03
23	GO:0009514: glyoxysome	2.32E-03
24	GO:0030125: clathrin vesicle coat	3.25E-03
25	GO:0005686: U2 snRNP	3.25E-03
26	GO:0005765: lysosomal membrane	3.59E-03
27	GO:0005783: endoplasmic reticulum	4.78E-03
28	GO:0043234: protein complex	5.44E-03
29	GO:0005905: clathrin-coated pit	6.67E-03
30	GO:0005789: endoplasmic reticulum membrane	1.08E-02
31	GO:0005777: peroxisome	1.13E-02
32	GO:0000785: chromatin	1.14E-02
33	GO:0000145: exocyst	1.14E-02
34	GO:0032580: Golgi cisterna membrane	1.25E-02
35	GO:0005788: endoplasmic reticulum lumen	1.47E-02
36	GO:0000151: ubiquitin ligase complex	1.71E-02
37	GO:0005643: nuclear pore	1.71E-02
38	GO:0000325: plant-type vacuole	1.89E-02
39	GO:0015934: large ribosomal subunit	1.89E-02
40	GO:0000786: nucleosome	1.96E-02
41	GO:0005886: plasma membrane	2.23E-02
42	GO:0031201: SNARE complex	2.29E-02
43	GO:0005856: cytoskeleton	2.63E-02
44	GO:0000139: Golgi membrane	3.37E-02
45	GO:0005794: Golgi apparatus	3.45E-02
46	GO:0010008: endosome membrane	3.45E-02
47	GO:0009524: phragmoplast	4.69E-02