co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:0009854: oxidative photosynthetic carbon pathway	1.15E-06
4	GO:0006098: pentose-phosphate shunt	3.70E-06
5	GO:0006108: malate metabolic process	9.76E-06
6	GO:0006094: gluconeogenesis	9.76E-06
7	GO:0051775: response to redox state	1.30E-05
8	GO:0080093: regulation of photorespiration	1.30E-05
9	GO:0031998: regulation of fatty acid beta-oxidation	1.30E-05
10	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.36E-05
11	GO:0006107: oxaloacetate metabolic process	9.36E-05
12	GO:0006734: NADH metabolic process	1.30E-04
13	GO:0009902: chloroplast relocation	1.30E-04
14	GO:0006542: glutamine biosynthetic process	1.30E-04
15	GO:0019676: ammonia assimilation cycle	1.30E-04
16	GO:0009853: photorespiration	1.37E-04
17	GO:0006099: tricarboxylic acid cycle	1.44E-04
18	GO:0010236: plastoquinone biosynthetic process	1.68E-04
19	GO:0006097: glyoxylate cycle	1.68E-04
20	GO:0050665: hydrogen peroxide biosynthetic process	2.10E-04
21	GO:0006096: glycolytic process	2.92E-04
22	GO:0071482: cellular response to light stimulus	3.94E-04
23	GO:0006259: DNA metabolic process	5.49E-04
24	GO:0006265: DNA topological change	6.03E-04
25	GO:0043085: positive regulation of catalytic activity	6.03E-04
26	GO:0006636: unsaturated fatty acid biosynthetic process	8.91E-04
27	GO:0009658: chloroplast organization	9.07E-04
28	GO:0055114: oxidation-reduction process	9.42E-04
29	GO:0008299: isoprenoid biosynthetic process	1.01E-03
30	GO:0030433: ubiquitin-dependent ERAD pathway	1.14E-03
31	GO:0046686: response to cadmium ion	1.24E-03
32	GO:0042631: cellular response to water deprivation	1.41E-03
33	GO:0006662: glycerol ether metabolic process	1.48E-03
34	GO:0007059: chromosome segregation	1.56E-03
35	GO:0009735: response to cytokinin	2.59E-03
36	GO:0007568: aging	2.87E-03
37	GO:0009637: response to blue light	3.05E-03
38	GO:0034599: cellular response to oxidative stress	3.15E-03
39	GO:0000209: protein polyubiquitination	3.73E-03
40	GO:0009585: red, far-red light phototransduction	4.44E-03
41	GO:0006810: transport	8.33E-03
42	GO:0005975: carbohydrate metabolic process	8.61E-03
43	GO:0080167: response to karrikin	1.31E-02
44	GO:0015979: photosynthesis	1.43E-02
45	GO:0045454: cell redox homeostasis	1.48E-02
46	GO:0008152: metabolic process	1.85E-02
47	GO:0006457: protein folding	3.11E-02
48	GO:0042742: defense response to bacterium	4.29E-02
49	GO:0006468: protein phosphorylation	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
2	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
3	GO:0008465: glycerate dehydrogenase activity	0.00E+00
4	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
5	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
6	GO:0016615: malate dehydrogenase activity	7.80E-07
7	GO:0004332: fructose-bisphosphate aldolase activity	7.80E-07
8	GO:0030060: L-malate dehydrogenase activity	1.15E-06
9	GO:0008746: NAD(P)+ transhydrogenase activity	1.30E-05
10	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.42E-05
11	GO:0050347: trans-octaprenyltranstransferase activity	3.42E-05
12	GO:0008080: N-acetyltransferase activity	4.01E-05
13	GO:0048038: quinone binding	5.15E-05
14	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	9.36E-05
15	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	9.36E-05
16	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	9.36E-05
17	GO:0008891: glycolate oxidase activity	1.30E-04
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.30E-04
19	GO:0008453: alanine-glyoxylate transaminase activity	1.30E-04
20	GO:0004356: glutamate-ammonia ligase activity	1.68E-04
21	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.94E-04
22	GO:0008047: enzyme activator activity	5.49E-04
23	GO:0008266: poly(U) RNA binding	7.72E-04
24	GO:0047134: protein-disulfide reductase activity	1.34E-03
25	GO:0010181: FMN binding	1.56E-03
26	GO:0004791: thioredoxin-disulfide reductase activity	1.56E-03
27	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.86E-03
28	GO:0004222: metalloendopeptidase activity	2.78E-03
29	GO:0051287: NAD binding	4.13E-03
30	GO:0031625: ubiquitin protein ligase binding	4.76E-03
31	GO:0015035: protein disulfide oxidoreductase activity	5.77E-03
32	GO:0016491: oxidoreductase activity	7.47E-03
33	GO:0004672: protein kinase activity	8.33E-03
34	GO:0042802: identical protein binding	9.77E-03
35	GO:0061630: ubiquitin protein ligase activity	1.35E-02
36	GO:0004871: signal transducer activity	1.53E-02
37	GO:0016740: transferase activity	2.99E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0009507: chloroplast	1.21E-16
3	GO:0048046: apoplast	1.17E-08
4	GO:0009570: chloroplast stroma	1.19E-07
5	GO:0009579: thylakoid	9.17E-07
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.70E-06
7	GO:0009941: chloroplast envelope	1.18E-05
8	GO:0005777: peroxisome	2.34E-05
9	GO:0009535: chloroplast thylakoid membrane	2.56E-05
10	GO:0009707: chloroplast outer membrane	1.06E-04
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.30E-04
12	GO:0010287: plastoglobule	4.16E-04
13	GO:0009536: plastid	9.23E-04
14	GO:0009295: nucleoid	2.02E-03
15	GO:0022626: cytosolic ribosome	2.71E-03
16	GO:0009534: chloroplast thylakoid	3.40E-03
17	GO:0031977: thylakoid lumen	3.43E-03
18	GO:0005834: heterotrimeric G-protein complex	5.20E-03
19	GO:0009706: chloroplast inner membrane	5.66E-03
20	GO:0005623: cell	6.73E-03
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.20E-02
22	GO:0031969: chloroplast membrane	1.31E-02
23	GO:0005773: vacuole	3.03E-02