Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G31970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000495: box H/ACA snoRNA 3'-end processing0.00E+00
2GO:0044843: cell cycle G1/S phase transition0.00E+00
3GO:0071731: response to nitric oxide0.00E+00
4GO:1990481: mRNA pseudouridine synthesis0.00E+00
5GO:0006412: translation1.16E-09
6GO:0031120: snRNA pseudouridine synthesis6.71E-06
7GO:0031118: rRNA pseudouridine synthesis6.71E-06
8GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine6.71E-06
9GO:0009220: pyrimidine ribonucleotide biosynthetic process1.83E-05
10GO:0044205: 'de novo' UMP biosynthetic process7.23E-05
11GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.74E-04
12GO:0001558: regulation of cell growth2.33E-04
13GO:0010162: seed dormancy process3.28E-04
14GO:0010229: inflorescence development4.30E-04
15GO:0009944: polarity specification of adaxial/abaxial axis5.76E-04
16GO:0000027: ribosomal large subunit assembly5.76E-04
17GO:0051302: regulation of cell division6.14E-04
18GO:0045892: negative regulation of transcription, DNA-templated6.29E-04
19GO:0007005: mitochondrion organization6.92E-04
20GO:0009294: DNA mediated transformation7.31E-04
21GO:0006520: cellular amino acid metabolic process8.97E-04
22GO:0009791: post-embryonic development9.82E-04
23GO:0009651: response to salt stress1.17E-03
24GO:0009735: response to cytokinin1.19E-03
25GO:0016049: cell growth1.50E-03
26GO:0048527: lateral root development1.70E-03
27GO:0008283: cell proliferation2.14E-03
28GO:0000154: rRNA modification2.32E-03
29GO:0009965: leaf morphogenesis2.32E-03
30GO:0006364: rRNA processing2.62E-03
31GO:0016569: covalent chromatin modification3.19E-03
32GO:0016036: cellular response to phosphate starvation4.59E-03
33GO:0007275: multicellular organism development5.04E-03
34GO:0042254: ribosome biogenesis6.59E-03
35GO:0009723: response to ethylene7.20E-03
36GO:0032259: methylation9.62E-03
37GO:0009734: auxin-activated signaling pathway1.26E-02
38GO:0009908: flower development1.38E-02
39GO:0051301: cell division1.58E-02
40GO:0006414: translational elongation1.98E-02
41GO:0009414: response to water deprivation2.42E-02
42GO:0009733: response to auxin2.67E-02
43GO:0009737: response to abscisic acid4.22E-02
RankGO TermAdjusted P value
1GO:0004070: aspartate carbamoyltransferase activity0.00E+00
2GO:0004164: diphthine synthase activity0.00E+00
3GO:0003735: structural constituent of ribosome2.35E-11
4GO:0004407: histone deacetylase activity6.34E-06
5GO:0016743: carboxyl- or carbamoyltransferase activity1.83E-05
6GO:0008097: 5S rRNA binding5.17E-05
7GO:0008235: metalloexopeptidase activity1.74E-04
8GO:0030515: snoRNA binding1.74E-04
9GO:0009982: pseudouridine synthase activity4.30E-04
10GO:0016597: amino acid binding1.25E-03
11GO:0003729: mRNA binding3.82E-03
12GO:0008168: methyltransferase activity6.33E-03
13GO:0016887: ATPase activity1.35E-02
14GO:0003723: RNA binding2.01E-02
15GO:0016787: hydrolase activity4.24E-02
RankGO TermAdjusted P value
1GO:0005730: nucleolus1.54E-13
2GO:0022626: cytosolic ribosome7.29E-12
3GO:0022625: cytosolic large ribosomal subunit4.81E-09
4GO:0005840: ribosome4.35E-07
5GO:0015934: large ribosomal subunit5.08E-05
6GO:0031429: box H/ACA snoRNP complex5.17E-05
7GO:0005829: cytosol1.08E-04
8GO:0031428: box C/D snoRNP complex1.20E-04
9GO:0032040: small-subunit processome3.96E-04
10GO:0009506: plasmodesma1.17E-03
11GO:0005774: vacuolar membrane1.21E-03
12GO:0030529: intracellular ribonucleoprotein complex1.30E-03
13GO:0005618: cell wall1.43E-03
14GO:0005773: vacuole2.07E-03
15GO:0005747: mitochondrial respiratory chain complex I2.99E-03
16GO:0022627: cytosolic small ribosomal subunit5.84E-03
17GO:0005737: cytoplasm6.98E-03
18GO:0016020: membrane9.74E-03
19GO:0005886: plasma membrane4.04E-02
Gene type



Gene DE type