co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:2000605: positive regulation of secondary growth	0.00E+00
3	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
4	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
5	GO:0070125: mitochondrial translational elongation	0.00E+00
6	GO:0051493: regulation of cytoskeleton organization	0.00E+00
7	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
8	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
9	GO:0007231: osmosensory signaling pathway	7.04E-06
10	GO:0033500: carbohydrate homeostasis	1.33E-05
11	GO:0006418: tRNA aminoacylation for protein translation	1.91E-05
12	GO:0016117: carotenoid biosynthetic process	3.90E-05
13	GO:0010067: procambium histogenesis	4.63E-05
14	GO:0009658: chloroplast organization	5.09E-05
15	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.78E-05
16	GO:0010442: guard cell morphogenesis	1.25E-04
17	GO:1900865: chloroplast RNA modification	1.51E-04
18	GO:0006415: translational termination	2.10E-04
19	GO:0006816: calcium ion transport	2.10E-04
20	GO:0010270: photosystem II oxygen evolving complex assembly	2.90E-04
21	GO:0043039: tRNA aminoacylation	2.90E-04
22	GO:0052541: plant-type cell wall cellulose metabolic process	2.90E-04
23	GO:0010086: embryonic root morphogenesis	2.90E-04
24	GO:0010020: chloroplast fission	3.14E-04
25	GO:0010223: secondary shoot formation	3.14E-04
26	GO:0006696: ergosterol biosynthetic process	4.78E-04
27	GO:0090506: axillary shoot meristem initiation	4.78E-04
28	GO:0001944: vasculature development	6.28E-04
29	GO:0010089: xylem development	6.80E-04
30	GO:0071329: cellular response to sucrose stimulus	6.85E-04
31	GO:0010088: phloem development	6.85E-04
32	GO:0016556: mRNA modification	6.85E-04
33	GO:0043572: plastid fission	6.85E-04
34	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.85E-04
35	GO:0045454: cell redox homeostasis	7.90E-04
36	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-04
37	GO:0006546: glycine catabolic process	9.08E-04
38	GO:0009765: photosynthesis, light harvesting	9.08E-04
39	GO:0007264: small GTPase mediated signal transduction	1.11E-03
40	GO:0016120: carotene biosynthetic process	1.15E-03
41	GO:0032543: mitochondrial translation	1.15E-03
42	GO:0016123: xanthophyll biosynthetic process	1.15E-03
43	GO:0006828: manganese ion transport	1.41E-03
44	GO:0048831: regulation of shoot system development	1.41E-03
45	GO:0006014: D-ribose metabolic process	1.41E-03
46	GO:0016554: cytidine to uridine editing	1.41E-03
47	GO:0042026: protein refolding	1.68E-03
48	GO:0006458: 'de novo' protein folding	1.68E-03
49	GO:0048509: regulation of meristem development	1.68E-03
50	GO:0048444: floral organ morphogenesis	1.68E-03
51	GO:0010555: response to mannitol	1.68E-03
52	GO:0008272: sulfate transport	1.98E-03
53	GO:0010928: regulation of auxin mediated signaling pathway	2.29E-03
54	GO:0009642: response to light intensity	2.29E-03
55	GO:0009657: plastid organization	2.61E-03
56	GO:0032544: plastid translation	2.61E-03
57	GO:0006949: syncytium formation	3.68E-03
58	GO:0006457: protein folding	3.80E-03
59	GO:0018119: peptidyl-cysteine S-nitrosylation	4.06E-03
60	GO:0009773: photosynthetic electron transport in photosystem I	4.06E-03
61	GO:0045037: protein import into chloroplast stroma	4.45E-03
62	GO:0006820: anion transport	4.45E-03
63	GO:0009767: photosynthetic electron transport chain	4.86E-03
64	GO:0006869: lipid transport	4.96E-03
65	GO:0009934: regulation of meristem structural organization	5.28E-03
66	GO:0070588: calcium ion transmembrane transport	5.71E-03
67	GO:0006071: glycerol metabolic process	6.15E-03
68	GO:0019344: cysteine biosynthetic process	6.61E-03
69	GO:0009116: nucleoside metabolic process	6.61E-03
70	GO:0007017: microtubule-based process	7.08E-03
71	GO:0051302: regulation of cell division	7.08E-03
72	GO:0010026: trichome differentiation	7.08E-03
73	GO:0042742: defense response to bacterium	7.49E-03
74	GO:0061077: chaperone-mediated protein folding	7.56E-03
75	GO:0009793: embryo development ending in seed dormancy	7.97E-03
76	GO:0080092: regulation of pollen tube growth	8.05E-03
77	GO:0009294: DNA mediated transformation	8.56E-03
78	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.56E-03
79	GO:0006468: protein phosphorylation	8.84E-03
80	GO:0019722: calcium-mediated signaling	9.07E-03
81	GO:0010087: phloem or xylem histogenesis	1.01E-02
82	GO:0008360: regulation of cell shape	1.07E-02
83	GO:0009958: positive gravitropism	1.07E-02
84	GO:0019252: starch biosynthetic process	1.18E-02
85	GO:0080156: mitochondrial mRNA modification	1.24E-02
86	GO:0009828: plant-type cell wall loosening	1.42E-02
87	GO:0046686: response to cadmium ion	1.46E-02
88	GO:0007267: cell-cell signaling	1.48E-02
89	GO:0010027: thylakoid membrane organization	1.61E-02
90	GO:0010029: regulation of seed germination	1.67E-02
91	GO:0015995: chlorophyll biosynthetic process	1.81E-02
92	GO:0048481: plant ovule development	1.94E-02
93	GO:0009817: defense response to fungus, incompatible interaction	1.94E-02
94	GO:0000160: phosphorelay signal transduction system	2.01E-02
95	GO:0016051: carbohydrate biosynthetic process	2.30E-02
96	GO:0071555: cell wall organization	2.90E-02
97	GO:0006629: lipid metabolic process	2.93E-02
98	GO:0009664: plant-type cell wall organization	3.24E-02
99	GO:0006813: potassium ion transport	3.40E-02
100	GO:0009736: cytokinin-activated signaling pathway	3.40E-02
101	GO:0006396: RNA processing	4.47E-02
102	GO:0006810: transport	4.66E-02
103	GO:0009735: response to cytokinin	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
4	GO:0046905: phytoene synthase activity	0.00E+00
5	GO:0004823: leucine-tRNA ligase activity	0.00E+00
6	GO:0009885: transmembrane histidine kinase cytokinin receptor activity	0.00E+00
7	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
8	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
9	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
10	GO:0019955: cytokine binding	0.00E+00
11	GO:0051920: peroxiredoxin activity	3.59E-07
12	GO:0016209: antioxidant activity	9.09E-07
13	GO:0002161: aminoacyl-tRNA editing activity	2.99E-06
14	GO:0016149: translation release factor activity, codon specific	7.04E-06
15	GO:0004812: aminoacyl-tRNA ligase activity	3.90E-05
16	GO:0003867: 4-aminobutyrate transaminase activity	1.25E-04
17	GO:0051996: squalene synthase activity	1.25E-04
18	GO:0003747: translation release factor activity	1.25E-04
19	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.25E-04
20	GO:0004831: tyrosine-tRNA ligase activity	1.25E-04
21	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.10E-04
22	GO:0009884: cytokinin receptor activity	2.90E-04
23	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	2.90E-04
24	GO:0004047: aminomethyltransferase activity	2.90E-04
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.19E-04
26	GO:0004601: peroxidase activity	4.32E-04
27	GO:0004148: dihydrolipoyl dehydrogenase activity	4.78E-04
28	GO:0030267: glyoxylate reductase (NADP) activity	4.78E-04
29	GO:0005034: osmosensor activity	4.78E-04
30	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	9.08E-04
31	GO:0004659: prenyltransferase activity	9.08E-04
32	GO:0005319: lipid transporter activity	9.08E-04
33	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.08E-04
34	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.15E-03
35	GO:0030414: peptidase inhibitor activity	1.15E-03
36	GO:0008381: mechanically-gated ion channel activity	1.15E-03
37	GO:0008374: O-acyltransferase activity	1.15E-03
38	GO:0008237: metallopeptidase activity	1.32E-03
39	GO:0080030: methyl indole-3-acetate esterase activity	1.41E-03
40	GO:0004747: ribokinase activity	1.68E-03
41	GO:0051753: mannan synthase activity	1.68E-03
42	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.68E-03
43	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.68E-03
44	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.68E-03
45	GO:0019899: enzyme binding	1.98E-03
46	GO:0016831: carboxy-lyase activity	1.98E-03
47	GO:0004222: metalloendopeptidase activity	2.12E-03
48	GO:0004033: aldo-keto reductase (NADP) activity	2.29E-03
49	GO:0008865: fructokinase activity	2.29E-03
50	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.95E-03
51	GO:0016301: kinase activity	3.10E-03
52	GO:0005384: manganese ion transmembrane transporter activity	3.31E-03
53	GO:0004674: protein serine/threonine kinase activity	3.34E-03
54	GO:0043621: protein self-association	3.37E-03
55	GO:0004672: protein kinase activity	3.61E-03
56	GO:0004673: protein histidine kinase activity	3.68E-03
57	GO:0044183: protein binding involved in protein folding	4.06E-03
58	GO:0000049: tRNA binding	4.45E-03
59	GO:0015095: magnesium ion transmembrane transporter activity	4.86E-03
60	GO:0000155: phosphorelay sensor kinase activity	4.86E-03
61	GO:0005262: calcium channel activity	4.86E-03
62	GO:0004565: beta-galactosidase activity	4.86E-03
63	GO:0003924: GTPase activity	5.75E-03
64	GO:0004519: endonuclease activity	6.40E-03
65	GO:0008324: cation transmembrane transporter activity	7.08E-03
66	GO:0043424: protein histidine kinase binding	7.08E-03
67	GO:0005524: ATP binding	7.33E-03
68	GO:0004176: ATP-dependent peptidase activity	7.56E-03
69	GO:0033612: receptor serine/threonine kinase binding	7.56E-03
70	GO:0030570: pectate lyase activity	8.56E-03
71	GO:0008289: lipid binding	8.75E-03
72	GO:0005102: receptor binding	9.60E-03
73	GO:0005199: structural constituent of cell wall	1.07E-02
74	GO:0019901: protein kinase binding	1.18E-02
75	GO:0048038: quinone binding	1.24E-02
76	GO:0016759: cellulose synthase activity	1.42E-02
77	GO:0005200: structural constituent of cytoskeleton	1.48E-02
78	GO:0008483: transaminase activity	1.48E-02
79	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.48E-02
80	GO:0016788: hydrolase activity, acting on ester bonds	1.63E-02
81	GO:0004721: phosphoprotein phosphatase activity	1.81E-02
82	GO:0050897: cobalt ion binding	2.15E-02
83	GO:0005525: GTP binding	2.24E-02
84	GO:0003746: translation elongation factor activity	2.30E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	2.91E-02
86	GO:0005198: structural molecule activity	2.99E-02
87	GO:0009055: electron carrier activity	3.14E-02
88	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.92E-02
89	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.10E-02
90	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.10E-02
91	GO:0030599: pectinesterase activity	4.19E-02
92	GO:0003779: actin binding	4.28E-02
93	GO:0051082: unfolded protein binding	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0070971: endoplasmic reticulum exit site	0.00E+00
2	GO:0009507: chloroplast	1.36E-14
3	GO:0009941: chloroplast envelope	3.26E-12
4	GO:0009570: chloroplast stroma	4.49E-10
5	GO:0009534: chloroplast thylakoid	1.74E-06
6	GO:0009535: chloroplast thylakoid membrane	3.73E-06
7	GO:0009505: plant-type cell wall	2.42E-05
8	GO:0048046: apoplast	2.71E-05
9	GO:0009543: chloroplast thylakoid lumen	1.23E-04
10	GO:0043190: ATP-binding cassette (ABC) transporter complex	1.25E-04
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.25E-04
12	GO:0009344: nitrite reductase complex [NAD(P)H]	1.25E-04
13	GO:0031977: thylakoid lumen	3.07E-04
14	GO:0046658: anchored component of plasma membrane	3.38E-04
15	GO:0005875: microtubule associated complex	3.93E-04
16	GO:0031969: chloroplast membrane	6.02E-04
17	GO:0009706: chloroplast inner membrane	7.83E-04
18	GO:0019898: extrinsic component of membrane	9.76E-04
19	GO:0005886: plasma membrane	1.33E-03
20	GO:0000793: condensed chromosome	1.41E-03
21	GO:0000794: condensed nuclear chromosome	1.98E-03
22	GO:0009533: chloroplast stromal thylakoid	1.98E-03
23	GO:0009536: plastid	2.63E-03
24	GO:0045298: tubulin complex	2.95E-03
25	GO:0009579: thylakoid	3.37E-03
26	GO:0016324: apical plasma membrane	3.68E-03
27	GO:0000311: plastid large ribosomal subunit	4.45E-03
28	GO:0031225: anchored component of membrane	5.05E-03
29	GO:0030095: chloroplast photosystem II	5.28E-03
30	GO:0005618: cell wall	6.61E-03
31	GO:0010287: plastoglobule	7.07E-03
32	GO:0042651: thylakoid membrane	7.08E-03
33	GO:0009654: photosystem II oxygen evolving complex	7.08E-03
34	GO:0009532: plastid stroma	7.56E-03
35	GO:0005759: mitochondrial matrix	9.37E-03
36	GO:0010319: stromule	1.48E-02
37	GO:0005874: microtubule	1.92E-02
38	GO:0009707: chloroplast outer membrane	1.94E-02
39	GO:0009506: plasmodesma	2.72E-02
40	GO:0043231: intracellular membrane-bounded organelle	3.23E-02
41	GO:0005747: mitochondrial respiratory chain complex I	3.92E-02
42	GO:0005576: extracellular region	4.70E-02
43	GO:0022626: cytosolic ribosome	4.94E-02