GO Enrichment Analysis of Co-expressed Genes with
AT1G31690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 2 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 3 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 4 | GO:0042026: protein refolding | 2.36E-05 |
| 5 | GO:0006458: 'de novo' protein folding | 2.36E-05 |
| 6 | GO:0019510: S-adenosylhomocysteine catabolic process | 8.25E-05 |
| 7 | GO:0006169: adenosine salvage | 8.25E-05 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 1.75E-04 |
| 9 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.97E-04 |
| 10 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.97E-04 |
| 11 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.97E-04 |
| 12 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 1.97E-04 |
| 13 | GO:0015712: hexose phosphate transport | 1.97E-04 |
| 14 | GO:0033353: S-adenosylmethionine cycle | 1.97E-04 |
| 15 | GO:0009662: etioplast organization | 1.97E-04 |
| 16 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.97E-04 |
| 17 | GO:0061077: chaperone-mediated protein folding | 3.03E-04 |
| 18 | GO:0010338: leaf formation | 3.29E-04 |
| 19 | GO:0035436: triose phosphate transmembrane transport | 3.29E-04 |
| 20 | GO:0006065: UDP-glucuronate biosynthetic process | 3.29E-04 |
| 21 | GO:0007005: mitochondrion organization | 3.32E-04 |
| 22 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.75E-04 |
| 23 | GO:0045088: regulation of innate immune response | 6.32E-04 |
| 24 | GO:0015713: phosphoglycerate transport | 6.32E-04 |
| 25 | GO:0006546: glycine catabolic process | 6.32E-04 |
| 26 | GO:0009694: jasmonic acid metabolic process | 6.32E-04 |
| 27 | GO:0042742: defense response to bacterium | 6.77E-04 |
| 28 | GO:0044209: AMP salvage | 8.00E-04 |
| 29 | GO:0006796: phosphate-containing compound metabolic process | 9.77E-04 |
| 30 | GO:0042793: transcription from plastid promoter | 9.77E-04 |
| 31 | GO:0009117: nucleotide metabolic process | 9.77E-04 |
| 32 | GO:0009094: L-phenylalanine biosynthetic process | 1.16E-03 |
| 33 | GO:1901259: chloroplast rRNA processing | 1.16E-03 |
| 34 | GO:0009658: chloroplast organization | 1.31E-03 |
| 35 | GO:0006826: iron ion transport | 1.36E-03 |
| 36 | GO:0006880: intracellular sequestering of iron ion | 1.36E-03 |
| 37 | GO:0046686: response to cadmium ion | 1.46E-03 |
| 38 | GO:0034968: histone lysine methylation | 1.57E-03 |
| 39 | GO:0007155: cell adhesion | 1.57E-03 |
| 40 | GO:0000105: histidine biosynthetic process | 1.57E-03 |
| 41 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.79E-03 |
| 42 | GO:0048193: Golgi vesicle transport | 1.79E-03 |
| 43 | GO:0044030: regulation of DNA methylation | 1.79E-03 |
| 44 | GO:0048589: developmental growth | 2.02E-03 |
| 45 | GO:0006349: regulation of gene expression by genetic imprinting | 2.26E-03 |
| 46 | GO:0008356: asymmetric cell division | 2.26E-03 |
| 47 | GO:0006949: syncytium formation | 2.51E-03 |
| 48 | GO:0051555: flavonol biosynthetic process | 2.51E-03 |
| 49 | GO:0019684: photosynthesis, light reaction | 2.77E-03 |
| 50 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.77E-03 |
| 51 | GO:0006879: cellular iron ion homeostasis | 2.77E-03 |
| 52 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.77E-03 |
| 53 | GO:0010216: maintenance of DNA methylation | 2.77E-03 |
| 54 | GO:0009767: photosynthetic electron transport chain | 3.31E-03 |
| 55 | GO:0080188: RNA-directed DNA methylation | 3.88E-03 |
| 56 | GO:0010039: response to iron ion | 3.88E-03 |
| 57 | GO:0007010: cytoskeleton organization | 4.48E-03 |
| 58 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.48E-03 |
| 59 | GO:0009695: jasmonic acid biosynthetic process | 4.80E-03 |
| 60 | GO:0009908: flower development | 5.10E-03 |
| 61 | GO:0031408: oxylipin biosynthetic process | 5.12E-03 |
| 62 | GO:0006730: one-carbon metabolic process | 5.45E-03 |
| 63 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.78E-03 |
| 64 | GO:0009294: DNA mediated transformation | 5.78E-03 |
| 65 | GO:0006284: base-excision repair | 6.13E-03 |
| 66 | GO:0009741: response to brassinosteroid | 7.20E-03 |
| 67 | GO:0006342: chromatin silencing | 7.20E-03 |
| 68 | GO:0007059: chromosome segregation | 7.57E-03 |
| 69 | GO:0009646: response to absence of light | 7.57E-03 |
| 70 | GO:0055072: iron ion homeostasis | 7.95E-03 |
| 71 | GO:0071554: cell wall organization or biogenesis | 8.33E-03 |
| 72 | GO:0000302: response to reactive oxygen species | 8.33E-03 |
| 73 | GO:0007264: small GTPase mediated signal transduction | 8.73E-03 |
| 74 | GO:0016032: viral process | 8.73E-03 |
| 75 | GO:0032502: developmental process | 8.73E-03 |
| 76 | GO:0009828: plant-type cell wall loosening | 9.53E-03 |
| 77 | GO:0009615: response to virus | 1.08E-02 |
| 78 | GO:0009607: response to biotic stimulus | 1.12E-02 |
| 79 | GO:0016311: dephosphorylation | 1.26E-02 |
| 80 | GO:0015979: photosynthesis | 1.28E-02 |
| 81 | GO:0018298: protein-chromophore linkage | 1.30E-02 |
| 82 | GO:0048767: root hair elongation | 1.35E-02 |
| 83 | GO:0045892: negative regulation of transcription, DNA-templated | 1.37E-02 |
| 84 | GO:0009407: toxin catabolic process | 1.39E-02 |
| 85 | GO:0010218: response to far red light | 1.39E-02 |
| 86 | GO:0009910: negative regulation of flower development | 1.44E-02 |
| 87 | GO:0009867: jasmonic acid mediated signaling pathway | 1.54E-02 |
| 88 | GO:0006281: DNA repair | 1.66E-02 |
| 89 | GO:0008152: metabolic process | 1.83E-02 |
| 90 | GO:0051707: response to other organism | 1.84E-02 |
| 91 | GO:0010114: response to red light | 1.84E-02 |
| 92 | GO:0009636: response to toxic substance | 2.00E-02 |
| 93 | GO:0009965: leaf morphogenesis | 2.00E-02 |
| 94 | GO:0009664: plant-type cell wall organization | 2.16E-02 |
| 95 | GO:0006096: glycolytic process | 2.56E-02 |
| 96 | GO:0016569: covalent chromatin modification | 2.80E-02 |
| 97 | GO:0009416: response to light stimulus | 2.95E-02 |
| 98 | GO:0009742: brassinosteroid mediated signaling pathway | 3.05E-02 |
| 99 | GO:0009790: embryo development | 3.83E-02 |
| 100 | GO:0045490: pectin catabolic process | 4.32E-02 |
| 101 | GO:0009739: response to gibberellin | 4.67E-02 |
| 102 | GO:0010468: regulation of gene expression | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 2 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 3 | GO:0030795: jasmonate O-methyltransferase activity | 0.00E+00 |
| 4 | GO:0102078: methyl jasmonate methylesterase activity | 0.00E+00 |
| 5 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 6 | GO:0004013: adenosylhomocysteinase activity | 8.25E-05 |
| 7 | GO:0004001: adenosine kinase activity | 8.25E-05 |
| 8 | GO:0044183: protein binding involved in protein folding | 1.14E-04 |
| 9 | GO:0004047: aminomethyltransferase activity | 1.97E-04 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.97E-04 |
| 11 | GO:0004618: phosphoglycerate kinase activity | 1.97E-04 |
| 12 | GO:0003913: DNA photolyase activity | 3.29E-04 |
| 13 | GO:0004751: ribose-5-phosphate isomerase activity | 3.29E-04 |
| 14 | GO:0070402: NADPH binding | 3.29E-04 |
| 15 | GO:0071917: triose-phosphate transmembrane transporter activity | 3.29E-04 |
| 16 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 3.29E-04 |
| 17 | GO:0004322: ferroxidase activity | 4.75E-04 |
| 18 | GO:0035529: NADH pyrophosphatase activity | 4.75E-04 |
| 19 | GO:0008199: ferric iron binding | 4.75E-04 |
| 20 | GO:0004664: prephenate dehydratase activity | 6.32E-04 |
| 21 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 6.32E-04 |
| 22 | GO:0015120: phosphoglycerate transmembrane transporter activity | 6.32E-04 |
| 23 | GO:0047769: arogenate dehydratase activity | 6.32E-04 |
| 24 | GO:0008725: DNA-3-methyladenine glycosylase activity | 8.00E-04 |
| 25 | GO:0008374: O-acyltransferase activity | 8.00E-04 |
| 26 | GO:0080030: methyl indole-3-acetate esterase activity | 9.77E-04 |
| 27 | GO:0016462: pyrophosphatase activity | 9.77E-04 |
| 28 | GO:0051920: peroxiredoxin activity | 1.16E-03 |
| 29 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.16E-03 |
| 30 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.16E-03 |
| 31 | GO:0004427: inorganic diphosphatase activity | 1.36E-03 |
| 32 | GO:0009881: photoreceptor activity | 1.36E-03 |
| 33 | GO:0043295: glutathione binding | 1.36E-03 |
| 34 | GO:0016209: antioxidant activity | 1.57E-03 |
| 35 | GO:0051287: NAD binding | 2.16E-03 |
| 36 | GO:0004565: beta-galactosidase activity | 3.31E-03 |
| 37 | GO:0051082: unfolded protein binding | 3.40E-03 |
| 38 | GO:0030570: pectate lyase activity | 5.78E-03 |
| 39 | GO:0018024: histone-lysine N-methyltransferase activity | 6.48E-03 |
| 40 | GO:0008194: UDP-glycosyltransferase activity | 6.54E-03 |
| 41 | GO:0005199: structural constituent of cell wall | 7.20E-03 |
| 42 | GO:0016740: transferase activity | 7.46E-03 |
| 43 | GO:0005355: glucose transmembrane transporter activity | 7.57E-03 |
| 44 | GO:0046982: protein heterodimerization activity | 8.88E-03 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 9.22E-03 |
| 46 | GO:0008483: transaminase activity | 9.94E-03 |
| 47 | GO:0005200: structural constituent of cytoskeleton | 9.94E-03 |
| 48 | GO:0016413: O-acetyltransferase activity | 1.04E-02 |
| 49 | GO:0016597: amino acid binding | 1.04E-02 |
| 50 | GO:0003993: acid phosphatase activity | 1.59E-02 |
| 51 | GO:0004364: glutathione transferase activity | 1.79E-02 |
| 52 | GO:0004672: protein kinase activity | 2.31E-02 |
| 53 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.62E-02 |
| 54 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.74E-02 |
| 55 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.74E-02 |
| 56 | GO:0016758: transferase activity, transferring hexosyl groups | 3.37E-02 |
| 57 | GO:0019843: rRNA binding | 3.43E-02 |
| 58 | GO:0016829: lyase activity | 3.63E-02 |
| 59 | GO:0016787: hydrolase activity | 3.69E-02 |
| 60 | GO:0015297: antiporter activity | 4.18E-02 |
| 61 | GO:0005507: copper ion binding | 4.19E-02 |
| 62 | GO:0008017: microtubule binding | 4.46E-02 |
| 63 | GO:0005525: GTP binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000940: condensed chromosome outer kinetochore | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 6.23E-10 |
| 3 | GO:0009579: thylakoid | 2.84E-06 |
| 4 | GO:0031225: anchored component of membrane | 6.55E-05 |
| 5 | GO:0009344: nitrite reductase complex [NAD(P)H] | 8.25E-05 |
| 6 | GO:0009941: chloroplast envelope | 2.24E-04 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 2.75E-04 |
| 8 | GO:0009507: chloroplast | 2.84E-04 |
| 9 | GO:0000793: condensed chromosome | 9.77E-04 |
| 10 | GO:0010168: ER body | 9.77E-04 |
| 11 | GO:0000786: nucleosome | 1.34E-03 |
| 12 | GO:0009539: photosystem II reaction center | 1.79E-03 |
| 13 | GO:0042644: chloroplast nucleoid | 2.02E-03 |
| 14 | GO:0005876: spindle microtubule | 2.26E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 3.59E-03 |
| 16 | GO:0005773: vacuole | 3.79E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 4.25E-03 |
| 18 | GO:0009536: plastid | 4.30E-03 |
| 19 | GO:0009505: plant-type cell wall | 4.44E-03 |
| 20 | GO:0022626: cytosolic ribosome | 5.48E-03 |
| 21 | GO:0048046: apoplast | 6.46E-03 |
| 22 | GO:0000790: nuclear chromatin | 6.48E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 7.95E-03 |
| 24 | GO:0005694: chromosome | 8.73E-03 |
| 25 | GO:0009295: nucleoid | 9.94E-03 |
| 26 | GO:0009535: chloroplast thylakoid membrane | 1.07E-02 |
| 27 | GO:0031969: chloroplast membrane | 1.12E-02 |
| 28 | GO:0005576: extracellular region | 1.34E-02 |
| 29 | GO:0016020: membrane | 1.41E-02 |
| 30 | GO:0000325: plant-type vacuole | 1.44E-02 |
| 31 | GO:0031977: thylakoid lumen | 1.74E-02 |
| 32 | GO:0005856: cytoskeleton | 2.00E-02 |
| 33 | GO:0005730: nucleolus | 2.75E-02 |
| 34 | GO:0009534: chloroplast thylakoid | 3.56E-02 |