GO Enrichment Analysis of Co-expressed Genes with
AT1G31650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 1.05E-06 |
| 4 | GO:0006546: glycine catabolic process | 4.57E-06 |
| 5 | GO:0015976: carbon utilization | 4.57E-06 |
| 6 | GO:0016117: carotenoid biosynthetic process | 1.01E-05 |
| 7 | GO:0032544: plastid translation | 3.92E-05 |
| 8 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.50E-05 |
| 9 | GO:0009658: chloroplast organization | 1.07E-04 |
| 10 | GO:0019253: reductive pentose-phosphate cycle | 1.31E-04 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.62E-04 |
| 12 | GO:0015979: photosynthesis | 1.95E-04 |
| 13 | GO:0006433: prolyl-tRNA aminoacylation | 2.75E-04 |
| 14 | GO:0071492: cellular response to UV-A | 2.75E-04 |
| 15 | GO:0006696: ergosterol biosynthetic process | 2.75E-04 |
| 16 | GO:0006000: fructose metabolic process | 2.75E-04 |
| 17 | GO:0010581: regulation of starch biosynthetic process | 2.75E-04 |
| 18 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.98E-04 |
| 19 | GO:0007231: osmosensory signaling pathway | 3.98E-04 |
| 20 | GO:2000122: negative regulation of stomatal complex development | 5.32E-04 |
| 21 | GO:0033500: carbohydrate homeostasis | 5.32E-04 |
| 22 | GO:0010037: response to carbon dioxide | 5.32E-04 |
| 23 | GO:0010109: regulation of photosynthesis | 5.32E-04 |
| 24 | GO:0071486: cellular response to high light intensity | 5.32E-04 |
| 25 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.32E-04 |
| 26 | GO:0009765: photosynthesis, light harvesting | 5.32E-04 |
| 27 | GO:0045727: positive regulation of translation | 5.32E-04 |
| 28 | GO:0016123: xanthophyll biosynthetic process | 6.73E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 6.73E-04 |
| 30 | GO:0009409: response to cold | 7.14E-04 |
| 31 | GO:0006810: transport | 8.23E-04 |
| 32 | GO:0042549: photosystem II stabilization | 8.23E-04 |
| 33 | GO:0016554: cytidine to uridine editing | 8.23E-04 |
| 34 | GO:0009645: response to low light intensity stimulus | 1.14E-03 |
| 35 | GO:0009644: response to high light intensity | 1.49E-03 |
| 36 | GO:0019430: removal of superoxide radicals | 1.50E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 1.50E-03 |
| 38 | GO:0006754: ATP biosynthetic process | 1.69E-03 |
| 39 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.69E-03 |
| 40 | GO:1900865: chloroplast RNA modification | 1.89E-03 |
| 41 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.89E-03 |
| 42 | GO:0043085: positive regulation of catalytic activity | 2.31E-03 |
| 43 | GO:0000272: polysaccharide catabolic process | 2.31E-03 |
| 44 | GO:0006816: calcium ion transport | 2.31E-03 |
| 45 | GO:0006415: translational termination | 2.31E-03 |
| 46 | GO:0006094: gluconeogenesis | 2.76E-03 |
| 47 | GO:0005986: sucrose biosynthetic process | 2.76E-03 |
| 48 | GO:0010207: photosystem II assembly | 2.99E-03 |
| 49 | GO:0010020: chloroplast fission | 2.99E-03 |
| 50 | GO:0070588: calcium ion transmembrane transport | 3.23E-03 |
| 51 | GO:0005985: sucrose metabolic process | 3.23E-03 |
| 52 | GO:0000027: ribosomal large subunit assembly | 3.73E-03 |
| 53 | GO:0005975: carbohydrate metabolic process | 3.93E-03 |
| 54 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.99E-03 |
| 55 | GO:0006418: tRNA aminoacylation for protein translation | 3.99E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 4.26E-03 |
| 57 | GO:0045490: pectin catabolic process | 4.48E-03 |
| 58 | GO:0080092: regulation of pollen tube growth | 4.53E-03 |
| 59 | GO:0019722: calcium-mediated signaling | 5.09E-03 |
| 60 | GO:0042631: cellular response to water deprivation | 5.68E-03 |
| 61 | GO:1901657: glycosyl compound metabolic process | 7.57E-03 |
| 62 | GO:0007267: cell-cell signaling | 8.24E-03 |
| 63 | GO:0010027: thylakoid membrane organization | 8.93E-03 |
| 64 | GO:0042128: nitrate assimilation | 9.65E-03 |
| 65 | GO:0045454: cell redox homeostasis | 1.03E-02 |
| 66 | GO:0048481: plant ovule development | 1.08E-02 |
| 67 | GO:0018298: protein-chromophore linkage | 1.08E-02 |
| 68 | GO:0009817: defense response to fungus, incompatible interaction | 1.08E-02 |
| 69 | GO:0010119: regulation of stomatal movement | 1.19E-02 |
| 70 | GO:0006839: mitochondrial transport | 1.39E-02 |
| 71 | GO:0006364: rRNA processing | 1.88E-02 |
| 72 | GO:0006096: glycolytic process | 2.12E-02 |
| 73 | GO:0048316: seed development | 2.17E-02 |
| 74 | GO:0009611: response to wounding | 2.31E-02 |
| 75 | GO:0042545: cell wall modification | 2.37E-02 |
| 76 | GO:0009553: embryo sac development | 2.37E-02 |
| 77 | GO:0018105: peptidyl-serine phosphorylation | 2.47E-02 |
| 78 | GO:0055085: transmembrane transport | 2.86E-02 |
| 79 | GO:0042744: hydrogen peroxide catabolic process | 3.11E-02 |
| 80 | GO:0040008: regulation of growth | 3.45E-02 |
| 81 | GO:0007623: circadian rhythm | 3.57E-02 |
| 82 | GO:0010468: regulation of gene expression | 4.04E-02 |
| 83 | GO:0042742: defense response to bacterium | 4.55E-02 |
| 84 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0051996: squalene synthase activity | 6.74E-05 |
| 7 | GO:0004089: carbonate dehydratase activity | 1.15E-04 |
| 8 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.62E-04 |
| 9 | GO:0004618: phosphoglycerate kinase activity | 1.62E-04 |
| 10 | GO:0010297: heteropolysaccharide binding | 1.62E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.62E-04 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.62E-04 |
| 13 | GO:0005528: FK506 binding | 1.88E-04 |
| 14 | GO:0004827: proline-tRNA ligase activity | 2.75E-04 |
| 15 | GO:0016149: translation release factor activity, codon specific | 3.98E-04 |
| 16 | GO:0017057: 6-phosphogluconolactonase activity | 3.98E-04 |
| 17 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 3.98E-04 |
| 18 | GO:0004659: prenyltransferase activity | 5.32E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.32E-04 |
| 20 | GO:0016168: chlorophyll binding | 7.08E-04 |
| 21 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 9.79E-04 |
| 22 | GO:0051920: peroxiredoxin activity | 9.79E-04 |
| 23 | GO:0016209: antioxidant activity | 1.32E-03 |
| 24 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.49E-03 |
| 25 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.60E-03 |
| 26 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.69E-03 |
| 27 | GO:0003747: translation release factor activity | 1.69E-03 |
| 28 | GO:0008047: enzyme activator activity | 2.10E-03 |
| 29 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.31E-03 |
| 30 | GO:0031072: heat shock protein binding | 2.76E-03 |
| 31 | GO:0005262: calcium channel activity | 2.76E-03 |
| 32 | GO:0004565: beta-galactosidase activity | 2.76E-03 |
| 33 | GO:0031409: pigment binding | 3.48E-03 |
| 34 | GO:0004857: enzyme inhibitor activity | 3.73E-03 |
| 35 | GO:0030570: pectate lyase activity | 4.81E-03 |
| 36 | GO:0022891: substrate-specific transmembrane transporter activity | 4.81E-03 |
| 37 | GO:0003756: protein disulfide isomerase activity | 5.09E-03 |
| 38 | GO:0004812: aminoacyl-tRNA ligase activity | 5.38E-03 |
| 39 | GO:0046872: metal ion binding | 6.25E-03 |
| 40 | GO:0050662: coenzyme binding | 6.28E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 6.28E-03 |
| 42 | GO:0016787: hydrolase activity | 6.63E-03 |
| 43 | GO:0005516: calmodulin binding | 6.90E-03 |
| 44 | GO:0048038: quinone binding | 6.91E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.57E-03 |
| 46 | GO:0008483: transaminase activity | 8.24E-03 |
| 47 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 9.65E-03 |
| 48 | GO:0004683: calmodulin-dependent protein kinase activity | 1.00E-02 |
| 49 | GO:0102483: scopolin beta-glucosidase activity | 1.00E-02 |
| 50 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.04E-02 |
| 51 | GO:0003824: catalytic activity | 1.13E-02 |
| 52 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.31E-02 |
| 53 | GO:0008422: beta-glucosidase activity | 1.35E-02 |
| 54 | GO:0009055: electron carrier activity | 1.36E-02 |
| 55 | GO:0005198: structural molecule activity | 1.65E-02 |
| 56 | GO:0045330: aspartyl esterase activity | 2.02E-02 |
| 57 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.17E-02 |
| 58 | GO:0030599: pectinesterase activity | 2.31E-02 |
| 59 | GO:0051082: unfolded protein binding | 2.42E-02 |
| 60 | GO:0016746: transferase activity, transferring acyl groups | 2.47E-02 |
| 61 | GO:0019843: rRNA binding | 2.84E-02 |
| 62 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.89E-02 |
| 63 | GO:0016829: lyase activity | 3.00E-02 |
| 64 | GO:0030246: carbohydrate binding | 3.04E-02 |
| 65 | GO:0005509: calcium ion binding | 4.20E-02 |
| 66 | GO:0042802: identical protein binding | 4.23E-02 |
| 67 | GO:0008168: methyltransferase activity | 4.73E-02 |
| 68 | GO:0004601: peroxidase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.06E-17 |
| 2 | GO:0009941: chloroplast envelope | 8.72E-12 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.36E-08 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.28E-07 |
| 5 | GO:0010319: stromule | 5.81E-07 |
| 6 | GO:0009570: chloroplast stroma | 1.13E-06 |
| 7 | GO:0048046: apoplast | 4.69E-05 |
| 8 | GO:0009782: photosystem I antenna complex | 6.74E-05 |
| 9 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 6.74E-05 |
| 10 | GO:0009534: chloroplast thylakoid | 1.55E-04 |
| 11 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.62E-04 |
| 12 | GO:0010287: plastoglobule | 3.38E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 3.63E-04 |
| 14 | GO:0005960: glycine cleavage complex | 3.98E-04 |
| 15 | GO:0009523: photosystem II | 4.39E-04 |
| 16 | GO:0031969: chloroplast membrane | 1.22E-03 |
| 17 | GO:0016324: apical plasma membrane | 2.10E-03 |
| 18 | GO:0000311: plastid large ribosomal subunit | 2.53E-03 |
| 19 | GO:0009508: plastid chromosome | 2.76E-03 |
| 20 | GO:0030076: light-harvesting complex | 3.23E-03 |
| 21 | GO:0005875: microtubule associated complex | 3.48E-03 |
| 22 | GO:0042651: thylakoid membrane | 3.99E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 3.99E-03 |
| 24 | GO:0009532: plastid stroma | 4.26E-03 |
| 25 | GO:0009579: thylakoid | 5.16E-03 |
| 26 | GO:0019898: extrinsic component of membrane | 6.60E-03 |
| 27 | GO:0005778: peroxisomal membrane | 8.24E-03 |
| 28 | GO:0009295: nucleoid | 8.24E-03 |
| 29 | GO:0009505: plant-type cell wall | 1.34E-02 |
| 30 | GO:0031977: thylakoid lumen | 1.44E-02 |
| 31 | GO:0016020: membrane | 1.59E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 2.42E-02 |