GO Enrichment Analysis of Co-expressed Genes with
AT1G31160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 4.02E-07 |
| 6 | GO:0090391: granum assembly | 7.23E-07 |
| 7 | GO:0009735: response to cytokinin | 3.75E-06 |
| 8 | GO:0042254: ribosome biogenesis | 3.99E-06 |
| 9 | GO:0042335: cuticle development | 7.75E-06 |
| 10 | GO:0009772: photosynthetic electron transport in photosystem II | 1.74E-05 |
| 11 | GO:0010196: nonphotochemical quenching | 1.74E-05 |
| 12 | GO:0032544: plastid translation | 2.97E-05 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 3.05E-05 |
| 14 | GO:1904966: positive regulation of vitamin E biosynthetic process | 5.64E-05 |
| 15 | GO:1904964: positive regulation of phytol biosynthetic process | 5.64E-05 |
| 16 | GO:0042371: vitamin K biosynthetic process | 5.64E-05 |
| 17 | GO:0071588: hydrogen peroxide mediated signaling pathway | 5.64E-05 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 6.52E-05 |
| 19 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.37E-04 |
| 20 | GO:0006013: mannose metabolic process | 2.34E-04 |
| 21 | GO:0006412: translation | 3.34E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 3.41E-04 |
| 23 | GO:0045727: positive regulation of translation | 4.56E-04 |
| 24 | GO:0010027: thylakoid membrane organization | 5.36E-04 |
| 25 | GO:0006564: L-serine biosynthetic process | 5.78E-04 |
| 26 | GO:0010236: plastoquinone biosynthetic process | 5.78E-04 |
| 27 | GO:0006665: sphingolipid metabolic process | 5.78E-04 |
| 28 | GO:0018298: protein-chromophore linkage | 6.92E-04 |
| 29 | GO:0009658: chloroplast organization | 7.02E-04 |
| 30 | GO:0000470: maturation of LSU-rRNA | 7.07E-04 |
| 31 | GO:0042372: phylloquinone biosynthetic process | 8.44E-04 |
| 32 | GO:0010019: chloroplast-nucleus signaling pathway | 8.44E-04 |
| 33 | GO:0009637: response to blue light | 8.69E-04 |
| 34 | GO:0034599: cellular response to oxidative stress | 9.06E-04 |
| 35 | GO:0009395: phospholipid catabolic process | 9.85E-04 |
| 36 | GO:0010114: response to red light | 1.10E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.13E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.29E-03 |
| 39 | GO:0000902: cell morphogenesis | 1.45E-03 |
| 40 | GO:0006364: rRNA processing | 1.47E-03 |
| 41 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.62E-03 |
| 42 | GO:0010205: photoinhibition | 1.62E-03 |
| 43 | GO:0043085: positive regulation of catalytic activity | 1.97E-03 |
| 44 | GO:0006352: DNA-templated transcription, initiation | 1.97E-03 |
| 45 | GO:0055114: oxidation-reduction process | 2.12E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.16E-03 |
| 47 | GO:0010143: cutin biosynthetic process | 2.56E-03 |
| 48 | GO:0042744: hydrogen peroxide catabolic process | 2.93E-03 |
| 49 | GO:0010025: wax biosynthetic process | 2.97E-03 |
| 50 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.97E-03 |
| 51 | GO:0000027: ribosomal large subunit assembly | 3.18E-03 |
| 52 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.40E-03 |
| 53 | GO:0016226: iron-sulfur cluster assembly | 3.86E-03 |
| 54 | GO:0010091: trichome branching | 4.34E-03 |
| 55 | GO:0006662: glycerol ether metabolic process | 5.09E-03 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 5.35E-03 |
| 57 | GO:0000302: response to reactive oxygen species | 5.88E-03 |
| 58 | GO:0006869: lipid transport | 8.90E-03 |
| 59 | GO:0016042: lipid catabolic process | 9.72E-03 |
| 60 | GO:0010218: response to far red light | 9.78E-03 |
| 61 | GO:0007568: aging | 1.01E-02 |
| 62 | GO:0009631: cold acclimation | 1.01E-02 |
| 63 | GO:0009809: lignin biosynthetic process | 1.59E-02 |
| 64 | GO:0045893: positive regulation of transcription, DNA-templated | 2.05E-02 |
| 65 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
| 66 | GO:0009451: RNA modification | 3.07E-02 |
| 67 | GO:0009739: response to gibberellin | 3.27E-02 |
| 68 | GO:0009723: response to ethylene | 4.57E-02 |
| 69 | GO:0080167: response to karrikin | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 2 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 3.94E-12 |
| 4 | GO:0016851: magnesium chelatase activity | 1.75E-06 |
| 5 | GO:0003735: structural constituent of ribosome | 2.57E-05 |
| 6 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 5.64E-05 |
| 7 | GO:0045485: omega-6 fatty acid desaturase activity | 5.64E-05 |
| 8 | GO:0016788: hydrolase activity, acting on ester bonds | 7.20E-05 |
| 9 | GO:0008266: poly(U) RNA binding | 1.02E-04 |
| 10 | GO:0016630: protochlorophyllide reductase activity | 1.37E-04 |
| 11 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.37E-04 |
| 12 | GO:0005528: FK506 binding | 1.46E-04 |
| 13 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.41E-04 |
| 14 | GO:0004659: prenyltransferase activity | 4.56E-04 |
| 15 | GO:0001053: plastid sigma factor activity | 4.56E-04 |
| 16 | GO:0016987: sigma factor activity | 4.56E-04 |
| 17 | GO:0043495: protein anchor | 4.56E-04 |
| 18 | GO:0016168: chlorophyll binding | 5.66E-04 |
| 19 | GO:0003959: NADPH dehydrogenase activity | 5.78E-04 |
| 20 | GO:0009922: fatty acid elongase activity | 5.78E-04 |
| 21 | GO:0016688: L-ascorbate peroxidase activity | 7.07E-04 |
| 22 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.07E-04 |
| 23 | GO:0004130: cytochrome-c peroxidase activity | 7.07E-04 |
| 24 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 7.07E-04 |
| 25 | GO:0004559: alpha-mannosidase activity | 8.44E-04 |
| 26 | GO:0019899: enzyme binding | 9.85E-04 |
| 27 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.13E-03 |
| 28 | GO:0043022: ribosome binding | 1.13E-03 |
| 29 | GO:0004033: aldo-keto reductase (NADP) activity | 1.13E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.28E-03 |
| 31 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.45E-03 |
| 32 | GO:0008047: enzyme activator activity | 1.79E-03 |
| 33 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.16E-03 |
| 34 | GO:0004565: beta-galactosidase activity | 2.36E-03 |
| 35 | GO:0031409: pigment binding | 2.97E-03 |
| 36 | GO:0051536: iron-sulfur cluster binding | 3.18E-03 |
| 37 | GO:0022891: substrate-specific transmembrane transporter activity | 4.10E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 4.58E-03 |
| 39 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.09E-03 |
| 40 | GO:0008080: N-acetyltransferase activity | 5.09E-03 |
| 41 | GO:0050662: coenzyme binding | 5.35E-03 |
| 42 | GO:0004791: thioredoxin-disulfide reductase activity | 5.35E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.43E-03 |
| 44 | GO:0016791: phosphatase activity | 6.71E-03 |
| 45 | GO:0016597: amino acid binding | 7.29E-03 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 7.49E-03 |
| 47 | GO:0016491: oxidoreductase activity | 1.06E-02 |
| 48 | GO:0003993: acid phosphatase activity | 1.11E-02 |
| 49 | GO:0008289: lipid binding | 1.40E-02 |
| 50 | GO:0051287: NAD binding | 1.48E-02 |
| 51 | GO:0016887: ATPase activity | 1.55E-02 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.59E-02 |
| 53 | GO:0015035: protein disulfide oxidoreductase activity | 2.09E-02 |
| 54 | GO:0016746: transferase activity, transferring acyl groups | 2.09E-02 |
| 55 | GO:0030246: carbohydrate binding | 2.40E-02 |
| 56 | GO:0042802: identical protein binding | 3.58E-02 |
| 57 | GO:0008168: methyltransferase activity | 4.01E-02 |
| 58 | GO:0004601: peroxidase activity | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.25E-20 |
| 3 | GO:0009570: chloroplast stroma | 5.49E-14 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.81E-13 |
| 5 | GO:0009941: chloroplast envelope | 2.40E-11 |
| 6 | GO:0009579: thylakoid | 3.54E-11 |
| 7 | GO:0009534: chloroplast thylakoid | 3.72E-11 |
| 8 | GO:0005840: ribosome | 2.24E-07 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 5.18E-07 |
| 10 | GO:0010007: magnesium chelatase complex | 7.23E-07 |
| 11 | GO:0031977: thylakoid lumen | 2.05E-06 |
| 12 | GO:0009923: fatty acid elongase complex | 5.64E-05 |
| 13 | GO:0009547: plastid ribosome | 5.64E-05 |
| 14 | GO:0048046: apoplast | 1.38E-04 |
| 15 | GO:0010287: plastoglobule | 2.48E-04 |
| 16 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 7.07E-04 |
| 17 | GO:0005618: cell wall | 7.71E-04 |
| 18 | GO:0016020: membrane | 1.29E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.45E-03 |
| 20 | GO:0009505: plant-type cell wall | 2.05E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 2.07E-03 |
| 22 | GO:0000311: plastid large ribosomal subunit | 2.16E-03 |
| 23 | GO:0030095: chloroplast photosystem II | 2.56E-03 |
| 24 | GO:0030076: light-harvesting complex | 2.76E-03 |
| 25 | GO:0042651: thylakoid membrane | 3.40E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 3.40E-03 |
| 27 | GO:0046658: anchored component of plasma membrane | 4.68E-03 |
| 28 | GO:0009522: photosystem I | 5.35E-03 |
| 29 | GO:0009523: photosystem II | 5.61E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 5.61E-03 |
| 31 | GO:0031969: chloroplast membrane | 6.77E-03 |
| 32 | GO:0010319: stromule | 7.00E-03 |
| 33 | GO:0022625: cytosolic large ribosomal subunit | 7.13E-03 |
| 34 | GO:0015934: large ribosomal subunit | 1.01E-02 |
| 35 | GO:0022626: cytosolic ribosome | 1.70E-02 |
| 36 | GO:0005576: extracellular region | 2.38E-02 |
| 37 | GO:0031225: anchored component of membrane | 2.78E-02 |