Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G30530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009264: deoxyribonucleotide catabolic process0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:0016048: detection of temperature stimulus0.00E+00
4GO:0080094: response to trehalose-6-phosphate0.00E+00
5GO:0009715: chalcone biosynthetic process0.00E+00
6GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
7GO:0009813: flavonoid biosynthetic process1.50E-07
8GO:0080167: response to karrikin1.41E-05
9GO:0051555: flavonol biosynthetic process2.07E-05
10GO:0071555: cell wall organization6.74E-05
11GO:0045489: pectin biosynthetic process2.30E-04
12GO:0008610: lipid biosynthetic process2.52E-04
13GO:0006083: acetate metabolic process2.65E-04
14GO:0048438: floral whorl development2.65E-04
15GO:0000066: mitochondrial ornithine transport2.65E-04
16GO:0019510: S-adenosylhomocysteine catabolic process2.65E-04
17GO:0006169: adenosine salvage2.65E-04
18GO:1901349: glucosinolate transport2.65E-04
19GO:1902265: abscisic acid homeostasis2.65E-04
20GO:0090449: phloem glucosinolate loading2.65E-04
21GO:0071370: cellular response to gibberellin stimulus2.65E-04
22GO:0006659: phosphatidylserine biosynthetic process2.65E-04
23GO:0019605: butyrate metabolic process2.65E-04
24GO:0010224: response to UV-B2.91E-04
25GO:0008152: metabolic process3.42E-04
26GO:1900386: positive regulation of flavonol biosynthetic process5.83E-04
27GO:0006152: purine nucleoside catabolic process5.83E-04
28GO:0009629: response to gravity5.83E-04
29GO:0007584: response to nutrient5.83E-04
30GO:0000719: photoreactive repair5.83E-04
31GO:0019388: galactose catabolic process5.83E-04
32GO:0033353: S-adenosylmethionine cycle5.83E-04
33GO:0007154: cell communication5.83E-04
34GO:0015712: hexose phosphate transport5.83E-04
35GO:0010220: positive regulation of vernalization response5.83E-04
36GO:0032886: regulation of microtubule-based process5.83E-04
37GO:0009698: phenylpropanoid metabolic process5.99E-04
38GO:0019253: reductive pentose-phosphate cycle8.73E-04
39GO:0009637: response to blue light9.38E-04
40GO:0006651: diacylglycerol biosynthetic process9.47E-04
41GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic9.47E-04
42GO:0031022: nuclear migration along microfilament9.47E-04
43GO:2000082: regulation of L-ascorbic acid biosynthetic process9.47E-04
44GO:0035436: triose phosphate transmembrane transport9.47E-04
45GO:0010253: UDP-rhamnose biosynthetic process9.47E-04
46GO:0042780: tRNA 3'-end processing9.47E-04
47GO:0009052: pentose-phosphate shunt, non-oxidative branch1.35E-03
48GO:0009650: UV protection1.35E-03
49GO:0009743: response to carbohydrate1.35E-03
50GO:0009963: positive regulation of flavonoid biosynthetic process1.35E-03
51GO:0009590: detection of gravity1.35E-03
52GO:0042823: pyridoxal phosphate biosynthetic process1.35E-03
53GO:0009411: response to UV1.72E-03
54GO:0019464: glycine decarboxylation via glycine cleavage system1.81E-03
55GO:0009765: photosynthesis, light harvesting1.81E-03
56GO:0006546: glycine catabolic process1.81E-03
57GO:0006021: inositol biosynthetic process1.81E-03
58GO:0015713: phosphoglycerate transport1.81E-03
59GO:0009902: chloroplast relocation1.81E-03
60GO:0034613: cellular protein localization1.81E-03
61GO:0009694: jasmonic acid metabolic process1.81E-03
62GO:0016117: carotenoid biosynthetic process2.03E-03
63GO:0006097: glyoxylate cycle2.31E-03
64GO:0044209: AMP salvage2.31E-03
65GO:0016120: carotene biosynthetic process2.31E-03
66GO:0006342: chromatin silencing2.36E-03
67GO:0007059: chromosome segregation2.53E-03
68GO:0010304: PSII associated light-harvesting complex II catabolic process2.85E-03
69GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.85E-03
70GO:0070814: hydrogen sulfide biosynthetic process2.85E-03
71GO:0010315: auxin efflux2.85E-03
72GO:0006559: L-phenylalanine catabolic process2.85E-03
73GO:0009117: nucleotide metabolic process2.85E-03
74GO:0000060: protein import into nucleus, translocation2.85E-03
75GO:0046855: inositol phosphate dephosphorylation2.85E-03
76GO:0009643: photosynthetic acclimation2.85E-03
77GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.90E-03
78GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.43E-03
79GO:0010077: maintenance of inflorescence meristem identity3.43E-03
80GO:0010076: maintenance of floral meristem identity3.43E-03
81GO:0009094: L-phenylalanine biosynthetic process3.43E-03
82GO:0017148: negative regulation of translation3.43E-03
83GO:0009903: chloroplast avoidance movement3.43E-03
84GO:0009611: response to wounding3.59E-03
85GO:0006400: tRNA modification4.04E-03
86GO:0031540: regulation of anthocyanin biosynthetic process4.69E-03
87GO:0052543: callose deposition in cell wall4.69E-03
88GO:0007155: cell adhesion4.69E-03
89GO:0005978: glycogen biosynthetic process4.69E-03
90GO:0009787: regulation of abscisic acid-activated signaling pathway4.69E-03
91GO:0022900: electron transport chain5.37E-03
92GO:0048193: Golgi vesicle transport5.37E-03
93GO:0044030: regulation of DNA methylation5.37E-03
94GO:0010218: response to far red light6.03E-03
95GO:0009056: catabolic process6.09E-03
96GO:0046916: cellular transition metal ion homeostasis6.09E-03
97GO:0010192: mucilage biosynthetic process7.61E-03
98GO:0009970: cellular response to sulfate starvation7.61E-03
99GO:0000103: sulfate assimilation7.61E-03
100GO:0005975: carbohydrate metabolic process8.20E-03
101GO:0048229: gametophyte development8.42E-03
102GO:0046856: phosphatidylinositol dephosphorylation8.42E-03
103GO:0019684: photosynthesis, light reaction8.42E-03
104GO:0000272: polysaccharide catabolic process8.42E-03
105GO:0010114: response to red light8.94E-03
106GO:0009926: auxin polar transport8.94E-03
107GO:0016024: CDP-diacylglycerol biosynthetic process9.26E-03
108GO:0010582: floral meristem determinacy9.26E-03
109GO:0016925: protein sumoylation9.26E-03
110GO:0042546: cell wall biogenesis9.30E-03
111GO:0009767: photosynthetic electron transport chain1.01E-02
112GO:0030048: actin filament-based movement1.01E-02
113GO:0006006: glucose metabolic process1.01E-02
114GO:0009934: regulation of meristem structural organization1.10E-02
115GO:0010143: cutin biosynthetic process1.10E-02
116GO:0010223: secondary shoot formation1.10E-02
117GO:0009225: nucleotide-sugar metabolic process1.20E-02
118GO:0005985: sucrose metabolic process1.20E-02
119GO:0009833: plant-type primary cell wall biogenesis1.29E-02
120GO:0006833: water transport1.29E-02
121GO:0009416: response to light stimulus1.29E-02
122GO:0019953: sexual reproduction1.49E-02
123GO:0009695: jasmonic acid biosynthetic process1.49E-02
124GO:0009768: photosynthesis, light harvesting in photosystem I1.49E-02
125GO:0006334: nucleosome assembly1.59E-02
126GO:0031408: oxylipin biosynthetic process1.59E-02
127GO:0006366: transcription from RNA polymerase II promoter1.59E-02
128GO:0006730: one-carbon metabolic process1.70E-02
129GO:0040007: growth1.81E-02
130GO:0010584: pollen exine formation1.92E-02
131GO:0006284: base-excision repair1.92E-02
132GO:0042127: regulation of cell proliferation1.92E-02
133GO:0010087: phloem or xylem histogenesis2.15E-02
134GO:0015991: ATP hydrolysis coupled proton transport2.15E-02
135GO:0042335: cuticle development2.15E-02
136GO:0000271: polysaccharide biosynthetic process2.15E-02
137GO:0008033: tRNA processing2.15E-02
138GO:0034220: ion transmembrane transport2.15E-02
139GO:0010182: sugar mediated signaling pathway2.26E-02
140GO:0006520: cellular amino acid metabolic process2.26E-02
141GO:0006810: transport2.28E-02
142GO:0007018: microtubule-based movement2.38E-02
143GO:0015986: ATP synthesis coupled proton transport2.38E-02
144GO:0008654: phospholipid biosynthetic process2.51E-02
145GO:0009791: post-embryonic development2.51E-02
146GO:0019252: starch biosynthetic process2.51E-02
147GO:0046686: response to cadmium ion2.52E-02
148GO:0071554: cell wall organization or biogenesis2.63E-02
149GO:0009630: gravitropism2.76E-02
150GO:0007264: small GTPase mediated signal transduction2.76E-02
151GO:0010583: response to cyclopentenone2.76E-02
152GO:0016032: viral process2.76E-02
153GO:0019761: glucosinolate biosynthetic process2.76E-02
154GO:1901657: glycosyl compound metabolic process2.88E-02
155GO:0009828: plant-type cell wall loosening3.02E-02
156GO:0016125: sterol metabolic process3.02E-02
157GO:0010252: auxin homeostasis3.02E-02
158GO:0051607: defense response to virus3.28E-02
159GO:0009739: response to gibberellin3.33E-02
160GO:0010468: regulation of gene expression3.56E-02
161GO:0010029: regulation of seed germination3.56E-02
162GO:0048573: photoperiodism, flowering3.84E-02
163GO:0016311: dephosphorylation3.98E-02
164GO:0030244: cellulose biosynthetic process4.13E-02
165GO:0018298: protein-chromophore linkage4.13E-02
166GO:0009832: plant-type cell wall biogenesis4.28E-02
167GO:0010311: lateral root formation4.28E-02
168GO:0009733: response to auxin4.32E-02
169GO:0009407: toxin catabolic process4.43E-02
170GO:0010119: regulation of stomatal movement4.58E-02
171GO:0009853: photorespiration4.88E-02
172GO:0009867: jasmonic acid mediated signaling pathway4.88E-02
173GO:0016051: carbohydrate biosynthetic process4.88E-02
174GO:0006970: response to osmotic stress4.94E-02
175GO:0051301: cell division4.99E-02
RankGO TermAdjusted P value
1GO:0102078: methyl jasmonate methylesterase activity0.00E+00
2GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
3GO:0045486: naringenin 3-dioxygenase activity0.00E+00
4GO:1990055: phenylacetaldehyde synthase activity0.00E+00
5GO:0016719: carotene 7,8-desaturase activity0.00E+00
6GO:0016210: naringenin-chalcone synthase activity0.00E+00
7GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
8GO:0003904: deoxyribodipyrimidine photo-lyase activity0.00E+00
9GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
10GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
11GO:0047974: guanosine deaminase activity0.00E+00
12GO:0030795: jasmonate O-methyltransferase activity0.00E+00
13GO:0045430: chalcone isomerase activity4.76E-05
14GO:0046982: protein heterodimerization activity6.44E-05
15GO:0016757: transferase activity, transferring glycosyl groups7.13E-05
16GO:0004837: tyrosine decarboxylase activity2.65E-04
17GO:0003987: acetate-CoA ligase activity2.65E-04
18GO:0004013: adenosylhomocysteinase activity2.65E-04
19GO:0047760: butyrate-CoA ligase activity2.65E-04
20GO:0010313: phytochrome binding2.65E-04
21GO:0004001: adenosine kinase activity2.65E-04
22GO:0090448: glucosinolate:proton symporter activity2.65E-04
23GO:0004566: beta-glucuronidase activity5.83E-04
24GO:0016868: intramolecular transferase activity, phosphotransferases5.83E-04
25GO:0004618: phosphoglycerate kinase activity5.83E-04
26GO:0008460: dTDP-glucose 4,6-dehydratase activity5.83E-04
27GO:0004047: aminomethyltransferase activity5.83E-04
28GO:0010280: UDP-L-rhamnose synthase activity5.83E-04
29GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity5.83E-04
30GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity5.83E-04
31GO:0000064: L-ornithine transmembrane transporter activity5.83E-04
32GO:0004614: phosphoglucomutase activity5.83E-04
33GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity5.83E-04
34GO:0050377: UDP-glucose 4,6-dehydratase activity5.83E-04
35GO:0004512: inositol-3-phosphate synthase activity5.83E-04
36GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity5.83E-04
37GO:0048531: beta-1,3-galactosyltransferase activity5.83E-04
38GO:0071917: triose-phosphate transmembrane transporter activity9.47E-04
39GO:0003913: DNA photolyase activity9.47E-04
40GO:0042781: 3'-tRNA processing endoribonuclease activity9.47E-04
41GO:0008253: 5'-nucleotidase activity9.47E-04
42GO:0004148: dihydrolipoyl dehydrogenase activity9.47E-04
43GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity9.47E-04
44GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity9.47E-04
45GO:0004751: ribose-5-phosphate isomerase activity9.47E-04
46GO:0004781: sulfate adenylyltransferase (ATP) activity9.47E-04
47GO:0031418: L-ascorbic acid binding1.20E-03
48GO:0008194: UDP-glycosyltransferase activity1.31E-03
49GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity1.35E-03
50GO:0001872: (1->3)-beta-D-glucan binding1.35E-03
51GO:0004375: glycine dehydrogenase (decarboxylating) activity1.35E-03
52GO:0035529: NADH pyrophosphatase activity1.35E-03
53GO:0048027: mRNA 5'-UTR binding1.35E-03
54GO:0004445: inositol-polyphosphate 5-phosphatase activity1.35E-03
55GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity1.35E-03
56GO:0015120: phosphoglycerate transmembrane transporter activity1.81E-03
57GO:0047769: arogenate dehydratase activity1.81E-03
58GO:0004664: prephenate dehydratase activity1.81E-03
59GO:0098599: palmitoyl hydrolase activity1.81E-03
60GO:0046527: glucosyltransferase activity1.81E-03
61GO:0045431: flavonol synthase activity2.31E-03
62GO:0008725: DNA-3-methyladenine glycosylase activity2.31E-03
63GO:0031386: protein tag2.31E-03
64GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.85E-03
65GO:0080030: methyl indole-3-acetate esterase activity2.85E-03
66GO:0008474: palmitoyl-(protein) hydrolase activity2.85E-03
67GO:0016208: AMP binding2.85E-03
68GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.85E-03
69GO:0102229: amylopectin maltohydrolase activity2.85E-03
70GO:0008195: phosphatidate phosphatase activity3.43E-03
71GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.43E-03
72GO:0016161: beta-amylase activity3.43E-03
73GO:0016759: cellulose synthase activity3.51E-03
74GO:0016758: transferase activity, transferring hexosyl groups3.77E-03
75GO:0016597: amino acid binding3.96E-03
76GO:0102425: myricetin 3-O-glucosyltransferase activity4.04E-03
77GO:0102360: daphnetin 3-O-glucosyltransferase activity4.04E-03
78GO:0016621: cinnamoyl-CoA reductase activity4.04E-03
79GO:0043295: glutathione binding4.04E-03
80GO:0004714: transmembrane receptor protein tyrosine kinase activity4.69E-03
81GO:0047893: flavonol 3-O-glucosyltransferase activity4.69E-03
82GO:0016740: transferase activity4.90E-03
83GO:0030247: polysaccharide binding4.93E-03
84GO:0046914: transition metal ion binding5.37E-03
85GO:0016207: 4-coumarate-CoA ligase activity6.09E-03
86GO:0008017: microtubule binding6.23E-03
87GO:0004575: sucrose alpha-glucosidase activity6.83E-03
88GO:0047372: acylglycerol lipase activity8.42E-03
89GO:0046961: proton-transporting ATPase activity, rotational mechanism8.42E-03
90GO:0016788: hydrolase activity, acting on ester bonds1.05E-02
91GO:0004175: endopeptidase activity1.10E-02
92GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.10E-02
93GO:0031409: pigment binding1.29E-02
94GO:0001046: core promoter sequence-specific DNA binding1.39E-02
95GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.48E-02
96GO:0052689: carboxylic ester hydrolase activity1.53E-02
97GO:0080043: quercetin 3-O-glucosyltransferase activity1.57E-02
98GO:0080044: quercetin 7-O-glucosyltransferase activity1.57E-02
99GO:0004650: polygalacturonase activity1.57E-02
100GO:0035251: UDP-glucosyltransferase activity1.59E-02
101GO:0004707: MAP kinase activity1.59E-02
102GO:0004176: ATP-dependent peptidase activity1.59E-02
103GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.70E-02
104GO:0016760: cellulose synthase (UDP-forming) activity1.81E-02
105GO:0016491: oxidoreductase activity1.90E-02
106GO:0004499: N,N-dimethylaniline monooxygenase activity1.92E-02
107GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.95E-02
108GO:0003677: DNA binding2.10E-02
109GO:0005507: copper ion binding2.18E-02
110GO:0016829: lyase activity2.34E-02
111GO:0016853: isomerase activity2.38E-02
112GO:0005355: glucose transmembrane transporter activity2.38E-02
113GO:0019901: protein kinase binding2.51E-02
114GO:0004518: nuclease activity2.76E-02
115GO:0015297: antiporter activity2.85E-02
116GO:0016791: phosphatase activity3.02E-02
117GO:0008483: transaminase activity3.15E-02
118GO:0016722: oxidoreductase activity, oxidizing metal ions3.15E-02
119GO:0008237: metallopeptidase activity3.15E-02
120GO:0016413: O-acetyltransferase activity3.28E-02
121GO:0015250: water channel activity3.42E-02
122GO:0016168: chlorophyll binding3.56E-02
123GO:0016887: ATPase activity3.81E-02
124GO:0016798: hydrolase activity, acting on glycosyl bonds3.84E-02
125GO:0102483: scopolin beta-glucosidase activity3.84E-02
126GO:0003824: catalytic activity4.19E-02
127GO:0005215: transporter activity4.23E-02
128GO:0016787: hydrolase activity4.27E-02
129GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.43E-02
130GO:0004222: metalloendopeptidase activity4.43E-02
131GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.58E-02
132GO:0050897: cobalt ion binding4.58E-02
133GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.88E-02
RankGO TermAdjusted P value
1GO:0000940: condensed chromosome outer kinetochore0.00E+00
2GO:0000788: nuclear nucleosome0.00E+00
3GO:0000786: nucleosome2.37E-07
4GO:0009344: nitrite reductase complex [NAD(P)H]2.65E-04
5GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain5.83E-04
6GO:0005765: lysosomal membrane5.99E-04
7GO:0031225: anchored component of membrane6.04E-04
8GO:0009941: chloroplast envelope6.97E-04
9GO:0042406: extrinsic component of endoplasmic reticulum membrane9.47E-04
10GO:0009509: chromoplast9.47E-04
11GO:0009507: chloroplast1.13E-03
12GO:0005775: vacuolar lumen1.35E-03
13GO:0005960: glycine cleavage complex1.35E-03
14GO:0005794: Golgi apparatus1.60E-03
15GO:0000790: nuclear chromatin2.03E-03
16GO:0010168: ER body2.85E-03
17GO:0010319: stromule3.73E-03
18GO:0009579: thylakoid4.73E-03
19GO:0000325: plant-type vacuole6.32E-03
20GO:0005876: spindle microtubule6.83E-03
21GO:0046658: anchored component of plasma membrane8.41E-03
22GO:0009574: preprophase band1.01E-02
23GO:0030095: chloroplast photosystem II1.10E-02
24GO:0009570: chloroplast stroma1.11E-02
25GO:0030076: light-harvesting complex1.20E-02
26GO:0005753: mitochondrial proton-transporting ATP synthase complex1.20E-02
27GO:0009506: plasmodesma1.38E-02
28GO:0009654: photosystem II oxygen evolving complex1.49E-02
29GO:0009505: plant-type cell wall1.74E-02
30GO:0005886: plasma membrane1.74E-02
31GO:0009535: chloroplast thylakoid membrane1.74E-02
32GO:0000139: Golgi membrane1.99E-02
33GO:0005871: kinesin complex2.03E-02
34GO:0009543: chloroplast thylakoid lumen2.16E-02
35GO:0009522: photosystem I2.38E-02
36GO:0009523: photosystem II2.51E-02
37GO:0019898: extrinsic component of membrane2.51E-02
38GO:0009705: plant-type vacuole membrane2.98E-02
39GO:0005773: vacuole3.75E-02
40GO:0009536: plastid4.90E-02
Gene type



Gene DE type