co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G30380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
3	GO:0010205: photoinhibition	1.23E-05
4	GO:0015979: photosynthesis	1.62E-05
5	GO:0043007: maintenance of rDNA	2.41E-05
6	GO:0035304: regulation of protein dephosphorylation	6.16E-05
7	GO:0010275: NAD(P)H dehydrogenase complex assembly	6.16E-05
8	GO:0030007: cellular potassium ion homeostasis	2.21E-04
9	GO:0009823: cytokinin catabolic process	2.84E-04
10	GO:0009913: epidermal cell differentiation	3.51E-04
11	GO:0042549: photosystem II stabilization	3.51E-04
12	GO:0009690: cytokinin metabolic process	5.68E-04
13	GO:0010206: photosystem II repair	7.25E-04
14	GO:0034765: regulation of ion transmembrane transport	7.25E-04
15	GO:0019684: photosynthesis, light reaction	9.78E-04
16	GO:0009773: photosynthetic electron transport in photosystem I	9.78E-04
17	GO:0006094: gluconeogenesis	1.16E-03
18	GO:0010207: photosystem II assembly	1.25E-03
19	GO:0016998: cell wall macromolecule catabolic process	1.76E-03
20	GO:0051260: protein homooligomerization	1.76E-03
21	GO:0000413: protein peptidyl-prolyl isomerization	2.33E-03
22	GO:0048825: cotyledon development	2.70E-03
23	GO:0016032: viral process	2.95E-03
24	GO:0071805: potassium ion transmembrane transport	3.35E-03
25	GO:0010029: regulation of seed germination	3.76E-03
26	GO:0010411: xyloglucan metabolic process	4.05E-03
27	GO:0015995: chlorophyll biosynthetic process	4.05E-03
28	GO:0010119: regulation of stomatal movement	4.80E-03
29	GO:0016051: carbohydrate biosynthetic process	5.11E-03
30	GO:0042546: cell wall biogenesis	6.25E-03
31	GO:0009585: red, far-red light phototransduction	7.47E-03
32	GO:0006096: glycolytic process	8.40E-03
33	GO:0009624: response to nematode	9.56E-03
34	GO:0006396: RNA processing	9.75E-03
35	GO:0009845: seed germination	1.18E-02
36	GO:0045490: pectin catabolic process	1.40E-02
37	GO:0007166: cell surface receptor signaling pathway	1.54E-02
38	GO:0045454: cell redox homeostasis	2.54E-02
39	GO:0032259: methylation	2.86E-02
40	GO:0006281: DNA repair	2.95E-02
41	GO:0008152: metabolic process	3.16E-02
42	GO:0016567: protein ubiquitination	3.72E-02
43	GO:0009555: pollen development	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
2	GO:0015269: calcium-activated potassium channel activity	0.00E+00
3	GO:0010242: oxygen evolving activity	2.41E-05
4	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	2.41E-05
5	GO:0004045: aminoacyl-tRNA hydrolase activity	2.21E-04
6	GO:0016846: carbon-sulfur lyase activity	2.84E-04
7	GO:0019139: cytokinin dehydrogenase activity	2.84E-04
8	GO:0015271: outward rectifier potassium channel activity	3.51E-04
9	GO:0004332: fructose-bisphosphate aldolase activity	3.51E-04
10	GO:0005267: potassium channel activity	6.45E-04
11	GO:0015020: glucuronosyltransferase activity	8.92E-04
12	GO:0031072: heat shock protein binding	1.16E-03
13	GO:0008131: primary amine oxidase activity	1.25E-03
14	GO:0008266: poly(U) RNA binding	1.25E-03
15	GO:0005216: ion channel activity	1.65E-03
16	GO:0043424: protein histidine kinase binding	1.65E-03
17	GO:0004176: ATP-dependent peptidase activity	1.76E-03
18	GO:0030570: pectate lyase activity	1.98E-03
19	GO:0003756: protein disulfide isomerase activity	2.10E-03
20	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.82E-03
21	GO:0008375: acetylglucosaminyltransferase activity	3.90E-03
22	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.05E-03
23	GO:0030145: manganese ion binding	4.80E-03
24	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.80E-03
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.76E-03
26	GO:0051082: unfolded protein binding	9.56E-03
27	GO:0005509: calcium ion binding	1.12E-02
28	GO:0016829: lyase activity	1.18E-02
29	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.34E-02
30	GO:0050660: flavin adenine dinucleotide binding	2.12E-02
31	GO:0008233: peptidase activity	2.20E-02
32	GO:0016787: hydrolase activity	2.62E-02
33	GO:0009055: electron carrier activity	3.10E-02
34	GO:0008289: lipid binding	3.73E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	7.81E-11
2	GO:0009534: chloroplast thylakoid	9.27E-09
3	GO:0009543: chloroplast thylakoid lumen	2.62E-08
4	GO:0031977: thylakoid lumen	1.79E-07
5	GO:0030095: chloroplast photosystem II	2.02E-07
6	GO:0009507: chloroplast	2.29E-06
7	GO:0009533: chloroplast stromal thylakoid	4.42E-06
8	GO:0009579: thylakoid	7.10E-06
9	GO:0009654: photosystem II oxygen evolving complex	4.87E-05
10	GO:0030093: chloroplast photosystem I	6.16E-05
11	GO:0009523: photosystem II	1.13E-04
12	GO:0019898: extrinsic component of membrane	1.13E-04
13	GO:0009538: photosystem I reaction center	5.68E-04
14	GO:0009570: chloroplast stroma	1.05E-03
15	GO:0009508: plastid chromosome	1.16E-03
16	GO:0009941: chloroplast envelope	2.86E-03
17	GO:0009295: nucleoid	3.35E-03
18	GO:0010287: plastoglobule	1.08E-02
19	GO:0016021: integral component of membrane	1.11E-02
20	GO:0005615: extracellular space	1.52E-02
21	GO:0031969: chloroplast membrane	2.23E-02
22	GO:0005777: peroxisome	4.89E-02