Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G30130

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0005996: monosaccharide metabolic process0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0090393: sepal giant cell development0.00E+00
5GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
6GO:0071370: cellular response to gibberellin stimulus0.00E+00
7GO:0015976: carbon utilization4.51E-07
8GO:0006810: transport2.47E-05
9GO:0071555: cell wall organization2.79E-05
10GO:0019464: glycine decarboxylation via glycine cleavage system6.10E-05
11GO:0009765: photosynthesis, light harvesting6.10E-05
12GO:2000122: negative regulation of stomatal complex development6.10E-05
13GO:0006546: glycine catabolic process6.10E-05
14GO:0010037: response to carbon dioxide6.10E-05
15GO:0006833: water transport9.85E-05
16GO:0080167: response to karrikin1.88E-04
17GO:0034220: ion transmembrane transport2.77E-04
18GO:0010597: green leaf volatile biosynthetic process3.07E-04
19GO:1901349: glucosinolate transport3.07E-04
20GO:0090449: phloem glucosinolate loading3.07E-04
21GO:0006659: phosphatidylserine biosynthetic process3.07E-04
22GO:0000066: mitochondrial ornithine transport3.07E-04
23GO:0007155: cell adhesion3.13E-04
24GO:0032544: plastid translation3.84E-04
25GO:0071554: cell wall organization or biogenesis4.05E-04
26GO:0010583: response to cyclopentenone4.42E-04
27GO:0005975: carbohydrate metabolic process4.56E-04
28GO:0015786: UDP-glucose transport6.71E-04
29GO:0030388: fructose 1,6-bisphosphate metabolic process6.71E-04
30GO:2000123: positive regulation of stomatal complex development6.71E-04
31GO:0009773: photosynthetic electron transport in photosystem I7.36E-04
32GO:0010411: xyloglucan metabolic process8.01E-04
33GO:0019253: reductive pentose-phosphate cycle1.07E-03
34GO:0006000: fructose metabolic process1.09E-03
35GO:0015840: urea transport1.09E-03
36GO:0006696: ergosterol biosynthetic process1.09E-03
37GO:0015783: GDP-fucose transport1.09E-03
38GO:0005985: sucrose metabolic process1.19E-03
39GO:0016051: carbohydrate biosynthetic process1.22E-03
40GO:0009833: plant-type primary cell wall biogenesis1.33E-03
41GO:0045490: pectin catabolic process1.53E-03
42GO:0006241: CTP biosynthetic process1.56E-03
43GO:0072334: UDP-galactose transmembrane transport1.56E-03
44GO:0080170: hydrogen peroxide transmembrane transport1.56E-03
45GO:0051016: barbed-end actin filament capping1.56E-03
46GO:0006165: nucleoside diphosphate phosphorylation1.56E-03
47GO:0006228: UTP biosynthetic process1.56E-03
48GO:0006168: adenine salvage1.56E-03
49GO:0032877: positive regulation of DNA endoreduplication1.56E-03
50GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.56E-03
51GO:0006166: purine ribonucleoside salvage1.56E-03
52GO:0007231: osmosensory signaling pathway1.56E-03
53GO:0009695: jasmonic acid biosynthetic process1.62E-03
54GO:0042546: cell wall biogenesis1.77E-03
55GO:0031408: oxylipin biosynthetic process1.78E-03
56GO:0009617: response to bacterium2.00E-03
57GO:0006183: GTP biosynthetic process2.09E-03
58GO:0045727: positive regulation of translation2.09E-03
59GO:0033500: carbohydrate homeostasis2.09E-03
60GO:2000038: regulation of stomatal complex development2.09E-03
61GO:0006749: glutathione metabolic process2.09E-03
62GO:0034440: lipid oxidation2.09E-03
63GO:0006021: inositol biosynthetic process2.09E-03
64GO:0009902: chloroplast relocation2.09E-03
65GO:0009694: jasmonic acid metabolic process2.09E-03
66GO:0006542: glutamine biosynthetic process2.09E-03
67GO:0019676: ammonia assimilation cycle2.09E-03
68GO:0016117: carotenoid biosynthetic process2.50E-03
69GO:0010375: stomatal complex patterning2.67E-03
70GO:0046785: microtubule polymerization2.67E-03
71GO:0016120: carotene biosynthetic process2.67E-03
72GO:0016123: xanthophyll biosynthetic process2.67E-03
73GO:0044209: AMP salvage2.67E-03
74GO:0000271: polysaccharide biosynthetic process2.70E-03
75GO:0045489: pectin biosynthetic process2.91E-03
76GO:0016554: cytidine to uridine editing3.30E-03
77GO:0010190: cytochrome b6f complex assembly3.30E-03
78GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.30E-03
79GO:0042545: cell wall modification3.71E-03
80GO:0007264: small GTPase mediated signal transduction3.83E-03
81GO:0009955: adaxial/abaxial pattern specification3.97E-03
82GO:0045926: negative regulation of growth3.97E-03
83GO:1901259: chloroplast rRNA processing3.97E-03
84GO:0017148: negative regulation of translation3.97E-03
85GO:0009554: megasporogenesis3.97E-03
86GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.97E-03
87GO:1901657: glycosyl compound metabolic process4.09E-03
88GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.35E-03
89GO:0007267: cell-cell signaling4.62E-03
90GO:0080027: response to herbivore4.68E-03
91GO:0015979: photosynthesis5.06E-03
92GO:0016126: sterol biosynthetic process5.19E-03
93GO:0045010: actin nucleation5.44E-03
94GO:0052543: callose deposition in cell wall5.44E-03
95GO:0042742: defense response to bacterium5.54E-03
96GO:0006002: fructose 6-phosphate metabolic process6.23E-03
97GO:0022900: electron transport chain6.23E-03
98GO:0009817: defense response to fungus, incompatible interaction6.77E-03
99GO:0010206: photosystem II repair7.07E-03
100GO:0006754: ATP biosynthetic process7.07E-03
101GO:0048589: developmental growth7.07E-03
102GO:0009407: toxin catabolic process7.47E-03
103GO:0010119: regulation of stomatal movement7.83E-03
104GO:1900865: chloroplast RNA modification7.94E-03
105GO:0009853: photorespiration8.59E-03
106GO:0009870: defense response signaling pathway, resistance gene-dependent8.84E-03
107GO:0043069: negative regulation of programmed cell death8.84E-03
108GO:0010192: mucilage biosynthetic process8.84E-03
109GO:0006816: calcium ion transport9.79E-03
110GO:0000272: polysaccharide catabolic process9.79E-03
111GO:0018119: peptidyl-cysteine S-nitrosylation9.79E-03
112GO:0006839: mitochondrial transport9.80E-03
113GO:0005986: sucrose biosynthetic process1.18E-02
114GO:0030036: actin cytoskeleton organization1.18E-02
115GO:0050826: response to freezing1.18E-02
116GO:0009725: response to hormone1.18E-02
117GO:0006094: gluconeogenesis1.18E-02
118GO:0009767: photosynthetic electron transport chain1.18E-02
119GO:0009636: response to toxic substance1.25E-02
120GO:0048768: root hair cell tip growth1.28E-02
121GO:0046686: response to cadmium ion1.31E-02
122GO:0070588: calcium ion transmembrane transport1.39E-02
123GO:0006636: unsaturated fatty acid biosynthetic process1.50E-02
124GO:0051603: proteolysis involved in cellular protein catabolic process1.55E-02
125GO:0007010: cytoskeleton organization1.62E-02
126GO:0007017: microtubule-based process1.74E-02
127GO:0009768: photosynthesis, light harvesting in photosystem I1.74E-02
128GO:0061077: chaperone-mediated protein folding1.86E-02
129GO:0080092: regulation of pollen tube growth1.98E-02
130GO:0019748: secondary metabolic process1.98E-02
131GO:0009294: DNA mediated transformation2.11E-02
132GO:0006284: base-excision repair2.24E-02
133GO:0019722: calcium-mediated signaling2.24E-02
134GO:0009742: brassinosteroid mediated signaling pathway2.27E-02
135GO:0015991: ATP hydrolysis coupled proton transport2.50E-02
136GO:0042631: cellular response to water deprivation2.50E-02
137GO:0080022: primary root development2.50E-02
138GO:0055085: transmembrane transport2.54E-02
139GO:0009741: response to brassinosteroid2.64E-02
140GO:0015986: ATP synthesis coupled proton transport2.78E-02
141GO:0007059: chromosome segregation2.78E-02
142GO:0009791: post-embryonic development2.92E-02
143GO:0019252: starch biosynthetic process2.92E-02
144GO:0008654: phospholipid biosynthetic process2.92E-02
145GO:0006633: fatty acid biosynthetic process3.36E-02
146GO:0010090: trichome morphogenesis3.36E-02
147GO:0007623: circadian rhythm3.69E-02
148GO:0051607: defense response to virus3.83E-02
149GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.15E-02
150GO:0030244: cellulose biosynthetic process4.81E-02
151GO:0018298: protein-chromophore linkage4.81E-02
152GO:0009414: response to water deprivation4.82E-02
153GO:0009832: plant-type cell wall biogenesis4.98E-02
154GO:0048767: root hair elongation4.98E-02
155GO:0000160: phosphorelay signal transduction system4.98E-02
RankGO TermAdjusted P value
1GO:0045435: lycopene epsilon cyclase activity0.00E+00
2GO:0050613: delta14-sterol reductase activity0.00E+00
3GO:0004760: serine-pyruvate transaminase activity0.00E+00
4GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
5GO:0046905: phytoene synthase activity0.00E+00
6GO:0030795: jasmonate O-methyltransferase activity0.00E+00
7GO:0102078: methyl jasmonate methylesterase activity0.00E+00
8GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
9GO:0050281: serine-glyoxylate transaminase activity0.00E+00
10GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.27E-05
11GO:0004375: glycine dehydrogenase (decarboxylating) activity3.40E-05
12GO:0004089: carbonate dehydratase activity5.74E-05
13GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.07E-04
14GO:0080132: fatty acid alpha-hydroxylase activity3.07E-04
15GO:0003838: sterol 24-C-methyltransferase activity3.07E-04
16GO:0051996: squalene synthase activity3.07E-04
17GO:0010313: phytochrome binding3.07E-04
18GO:0090448: glucosinolate:proton symporter activity3.07E-04
19GO:0016762: xyloglucan:xyloglucosyl transferase activity4.05E-04
20GO:0004575: sucrose alpha-glucosidase activity5.47E-04
21GO:0016413: O-acetyltransferase activity6.06E-04
22GO:0015250: water channel activity6.52E-04
23GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.71E-04
24GO:0000064: L-ornithine transmembrane transporter activity6.71E-04
25GO:0004512: inositol-3-phosphate synthase activity6.71E-04
26GO:0008967: phosphoglycolate phosphatase activity6.71E-04
27GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.71E-04
28GO:0042389: omega-3 fatty acid desaturase activity6.71E-04
29GO:0004618: phosphoglycerate kinase activity6.71E-04
30GO:0010297: heteropolysaccharide binding6.71E-04
31GO:0004047: aminomethyltransferase activity6.71E-04
32GO:0016798: hydrolase activity, acting on glycosyl bonds8.01E-04
33GO:0004148: dihydrolipoyl dehydrogenase activity1.09E-03
34GO:0016165: linoleate 13S-lipoxygenase activity1.09E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.09E-03
36GO:0005528: FK506 binding1.47E-03
37GO:0048027: mRNA 5'-UTR binding1.56E-03
38GO:0003999: adenine phosphoribosyltransferase activity1.56E-03
39GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.56E-03
40GO:0005460: UDP-glucose transmembrane transporter activity1.56E-03
41GO:0004550: nucleoside diphosphate kinase activity1.56E-03
42GO:0001872: (1->3)-beta-D-glucan binding1.56E-03
43GO:0004185: serine-type carboxypeptidase activity1.68E-03
44GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.95E-03
45GO:0008453: alanine-glyoxylate transaminase activity2.09E-03
46GO:0015204: urea transmembrane transporter activity2.09E-03
47GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.09E-03
48GO:0005459: UDP-galactose transmembrane transporter activity2.67E-03
49GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.67E-03
50GO:0004356: glutamate-ammonia ligase activity2.67E-03
51GO:0008725: DNA-3-methyladenine glycosylase activity2.67E-03
52GO:0045330: aspartyl esterase activity2.80E-03
53GO:0042578: phosphoric ester hydrolase activity3.30E-03
54GO:0008200: ion channel inhibitor activity3.30E-03
55GO:0080030: methyl indole-3-acetate esterase activity3.30E-03
56GO:0019901: protein kinase binding3.35E-03
57GO:0004650: polygalacturonase activity3.43E-03
58GO:0030599: pectinesterase activity3.57E-03
59GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.97E-03
60GO:0051753: mannan synthase activity3.97E-03
61GO:0016759: cellulose synthase activity4.35E-03
62GO:0016722: oxidoreductase activity, oxidizing metal ions4.62E-03
63GO:0005200: structural constituent of cytoskeleton4.62E-03
64GO:0043295: glutathione binding4.68E-03
65GO:0016758: transferase activity, transferring hexosyl groups4.95E-03
66GO:0019843: rRNA binding5.13E-03
67GO:0004564: beta-fructofuranosidase activity5.44E-03
68GO:0102483: scopolin beta-glucosidase activity6.11E-03
69GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.23E-03
70GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism7.07E-03
71GO:0008422: beta-glucosidase activity9.38E-03
72GO:0016757: transferase activity, transferring glycosyl groups9.52E-03
73GO:0004860: protein kinase inhibitor activity9.79E-03
74GO:0005089: Rho guanyl-nucleotide exchange factor activity9.79E-03
75GO:0046961: proton-transporting ATPase activity, rotational mechanism9.79E-03
76GO:0004364: glutathione transferase activity1.07E-02
77GO:0004565: beta-galactosidase activity1.18E-02
78GO:0005262: calcium channel activity1.18E-02
79GO:0051537: 2 iron, 2 sulfur cluster binding1.20E-02
80GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.28E-02
81GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.30E-02
82GO:0031409: pigment binding1.50E-02
83GO:0004857: enzyme inhibitor activity1.62E-02
84GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.83E-02
85GO:0030570: pectate lyase activity2.11E-02
86GO:0016760: cellulose synthase (UDP-forming) activity2.11E-02
87GO:0016740: transferase activity2.39E-02
88GO:0050662: coenzyme binding2.78E-02
89GO:0004872: receptor activity2.92E-02
90GO:0005507: copper ion binding3.00E-02
91GO:0048038: quinone binding3.07E-02
92GO:0004518: nuclease activity3.21E-02
93GO:0000156: phosphorelay response regulator activity3.36E-02
94GO:0051015: actin filament binding3.36E-02
95GO:0015297: antiporter activity3.53E-02
96GO:0008483: transaminase activity3.67E-02
97GO:0016168: chlorophyll binding4.15E-02
98GO:0030247: polysaccharide binding4.48E-02
99GO:0008236: serine-type peptidase activity4.64E-02
RankGO TermAdjusted P value
1GO:0009579: thylakoid2.83E-10
2GO:0009507: chloroplast9.30E-10
3GO:0009543: chloroplast thylakoid lumen2.98E-09
4GO:0009535: chloroplast thylakoid membrane2.98E-09
5GO:0048046: apoplast9.57E-08
6GO:0031225: anchored component of membrane1.34E-06
7GO:0009505: plant-type cell wall1.98E-06
8GO:0005576: extracellular region2.87E-06
9GO:0009941: chloroplast envelope1.32E-05
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.67E-05
11GO:0009570: chloroplast stroma1.99E-05
12GO:0005960: glycine cleavage complex3.40E-05
13GO:0005775: vacuolar lumen3.40E-05
14GO:0046658: anchored component of plasma membrane7.81E-05
15GO:0005618: cell wall8.90E-05
16GO:0009654: photosystem II oxygen evolving complex1.33E-04
17GO:0009344: nitrite reductase complex [NAD(P)H]3.07E-04
18GO:0009534: chloroplast thylakoid5.52E-04
19GO:0000427: plastid-encoded plastid RNA polymerase complex6.71E-04
20GO:0042170: plastid membrane6.71E-04
21GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain6.71E-04
22GO:0005773: vacuole7.52E-04
23GO:0005886: plasma membrane8.65E-04
24GO:0030095: chloroplast photosystem II1.07E-03
25GO:0000325: plant-type vacuole1.09E-03
26GO:0031977: thylakoid lumen1.52E-03
27GO:0005794: Golgi apparatus1.65E-03
28GO:0010168: ER body3.30E-03
29GO:0019898: extrinsic component of membrane3.35E-03
30GO:0010319: stromule4.62E-03
31GO:0042807: central vacuole4.68E-03
32GO:0010287: plastoglobule4.78E-03
33GO:0016021: integral component of membrane5.31E-03
34GO:0009539: photosystem II reaction center6.23E-03
35GO:0000326: protein storage vacuole6.23E-03
36GO:0045298: tubulin complex7.07E-03
37GO:0005763: mitochondrial small ribosomal subunit7.07E-03
38GO:0016020: membrane7.77E-03
39GO:0055028: cortical microtubule8.84E-03
40GO:0016324: apical plasma membrane8.84E-03
41GO:0005765: lysosomal membrane9.79E-03
42GO:0048471: perinuclear region of cytoplasm9.79E-03
43GO:0000139: Golgi membrane1.00E-02
44GO:0031902: late endosome membrane1.02E-02
45GO:0000311: plastid large ribosomal subunit1.08E-02
46GO:0005887: integral component of plasma membrane1.19E-02
47GO:0009506: plasmodesma1.22E-02
48GO:0030176: integral component of endoplasmic reticulum membrane1.39E-02
49GO:0005753: mitochondrial proton-transporting ATP synthase complex1.39E-02
50GO:0030076: light-harvesting complex1.39E-02
51GO:0005875: microtubule associated complex1.50E-02
52GO:0005758: mitochondrial intermembrane space1.62E-02
53GO:0009522: photosystem I2.78E-02
54GO:0009523: photosystem II2.92E-02
55GO:0009707: chloroplast outer membrane4.81E-02
Gene type



Gene DE type