GO Enrichment Analysis of Co-expressed Genes with
AT1G29940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 3 | GO:0032264: IMP salvage | 0.00E+00 |
| 4 | GO:0019567: arabinose biosynthetic process | 5.79E-05 |
| 5 | GO:0006643: membrane lipid metabolic process | 5.79E-05 |
| 6 | GO:0006390: transcription from mitochondrial promoter | 5.79E-05 |
| 7 | GO:0009168: purine ribonucleoside monophosphate biosynthetic process | 5.79E-05 |
| 8 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.41E-04 |
| 9 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.41E-04 |
| 10 | GO:0010155: regulation of proton transport | 1.41E-04 |
| 11 | GO:0080055: low-affinity nitrate transport | 2.40E-04 |
| 12 | GO:0007276: gamete generation | 3.49E-04 |
| 13 | GO:0033358: UDP-L-arabinose biosynthetic process | 4.66E-04 |
| 14 | GO:0042273: ribosomal large subunit biogenesis | 4.66E-04 |
| 15 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 4.66E-04 |
| 16 | GO:0045227: capsule polysaccharide biosynthetic process | 4.66E-04 |
| 17 | GO:0018279: protein N-linked glycosylation via asparagine | 5.92E-04 |
| 18 | GO:0006564: L-serine biosynthetic process | 5.92E-04 |
| 19 | GO:0046686: response to cadmium ion | 6.39E-04 |
| 20 | GO:0001731: formation of translation preinitiation complex | 7.24E-04 |
| 21 | GO:0042773: ATP synthesis coupled electron transport | 1.01E-03 |
| 22 | GO:0010044: response to aluminum ion | 1.01E-03 |
| 23 | GO:0046470: phosphatidylcholine metabolic process | 1.01E-03 |
| 24 | GO:0009819: drought recovery | 1.16E-03 |
| 25 | GO:0045454: cell redox homeostasis | 1.19E-03 |
| 26 | GO:0009699: phenylpropanoid biosynthetic process | 1.32E-03 |
| 27 | GO:0006364: rRNA processing | 1.52E-03 |
| 28 | GO:0043067: regulation of programmed cell death | 1.65E-03 |
| 29 | GO:0010582: floral meristem determinacy | 2.21E-03 |
| 30 | GO:0015706: nitrate transport | 2.21E-03 |
| 31 | GO:0006446: regulation of translational initiation | 2.62E-03 |
| 32 | GO:0009225: nucleotide-sugar metabolic process | 2.82E-03 |
| 33 | GO:0000162: tryptophan biosynthetic process | 3.04E-03 |
| 34 | GO:0034976: response to endoplasmic reticulum stress | 3.04E-03 |
| 35 | GO:0009790: embryo development | 3.11E-03 |
| 36 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.26E-03 |
| 37 | GO:0051302: regulation of cell division | 3.49E-03 |
| 38 | GO:0006012: galactose metabolic process | 4.20E-03 |
| 39 | GO:0010501: RNA secondary structure unwinding | 4.95E-03 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 5.48E-03 |
| 41 | GO:0042254: ribosome biogenesis | 5.77E-03 |
| 42 | GO:0080167: response to karrikin | 7.02E-03 |
| 43 | GO:0009414: response to water deprivation | 7.56E-03 |
| 44 | GO:0016126: sterol biosynthetic process | 7.78E-03 |
| 45 | GO:0009816: defense response to bacterium, incompatible interaction | 8.08E-03 |
| 46 | GO:0042128: nitrate assimilation | 8.40E-03 |
| 47 | GO:0048481: plant ovule development | 9.36E-03 |
| 48 | GO:0009832: plant-type cell wall biogenesis | 9.69E-03 |
| 49 | GO:0009407: toxin catabolic process | 1.00E-02 |
| 50 | GO:0010043: response to zinc ion | 1.04E-02 |
| 51 | GO:0009853: photorespiration | 1.11E-02 |
| 52 | GO:0006099: tricarboxylic acid cycle | 1.14E-02 |
| 53 | GO:0009636: response to toxic substance | 1.44E-02 |
| 54 | GO:0009664: plant-type cell wall organization | 1.55E-02 |
| 55 | GO:0006486: protein glycosylation | 1.63E-02 |
| 56 | GO:0009735: response to cytokinin | 1.69E-02 |
| 57 | GO:0006857: oligopeptide transport | 1.71E-02 |
| 58 | GO:0006096: glycolytic process | 1.84E-02 |
| 59 | GO:0048316: seed development | 1.88E-02 |
| 60 | GO:0006413: translational initiation | 2.94E-02 |
| 61 | GO:0010150: leaf senescence | 3.09E-02 |
| 62 | GO:0009451: RNA modification | 3.15E-02 |
| 63 | GO:0009617: response to bacterium | 3.51E-02 |
| 64 | GO:0006979: response to oxidative stress | 3.76E-02 |
| 65 | GO:0009826: unidimensional cell growth | 4.11E-02 |
| 66 | GO:0009860: pollen tube growth | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 2 | GO:0003876: AMP deaminase activity | 0.00E+00 |
| 3 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 4 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 5 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 6 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 9.15E-06 |
| 7 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.74E-05 |
| 8 | GO:0008802: betaine-aldehyde dehydrogenase activity | 5.79E-05 |
| 9 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 5.79E-05 |
| 10 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 5.79E-05 |
| 11 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.25E-04 |
| 12 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.41E-04 |
| 13 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.41E-04 |
| 14 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.41E-04 |
| 15 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.41E-04 |
| 16 | GO:0043021: ribonucleoprotein complex binding | 1.41E-04 |
| 17 | GO:0004817: cysteine-tRNA ligase activity | 1.41E-04 |
| 18 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.40E-04 |
| 19 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.40E-04 |
| 20 | GO:0050373: UDP-arabinose 4-epimerase activity | 4.66E-04 |
| 21 | GO:0000166: nucleotide binding | 5.33E-04 |
| 22 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 5.92E-04 |
| 23 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.92E-04 |
| 24 | GO:0003978: UDP-glucose 4-epimerase activity | 8.63E-04 |
| 25 | GO:0005507: copper ion binding | 9.08E-04 |
| 26 | GO:0008143: poly(A) binding | 1.01E-03 |
| 27 | GO:0043295: glutathione binding | 1.01E-03 |
| 28 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 1.32E-03 |
| 29 | GO:0004630: phospholipase D activity | 1.32E-03 |
| 30 | GO:0003678: DNA helicase activity | 1.48E-03 |
| 31 | GO:0030955: potassium ion binding | 1.65E-03 |
| 32 | GO:0004743: pyruvate kinase activity | 1.65E-03 |
| 33 | GO:0001054: RNA polymerase I activity | 2.02E-03 |
| 34 | GO:0008026: ATP-dependent helicase activity | 2.27E-03 |
| 35 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.41E-03 |
| 36 | GO:0003729: mRNA binding | 2.81E-03 |
| 37 | GO:0003723: RNA binding | 3.14E-03 |
| 38 | GO:0051536: iron-sulfur cluster binding | 3.26E-03 |
| 39 | GO:0003954: NADH dehydrogenase activity | 3.26E-03 |
| 40 | GO:0043424: protein histidine kinase binding | 3.49E-03 |
| 41 | GO:0003756: protein disulfide isomerase activity | 4.44E-03 |
| 42 | GO:0001085: RNA polymerase II transcription factor binding | 5.21E-03 |
| 43 | GO:0050662: coenzyme binding | 5.48E-03 |
| 44 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 6.02E-03 |
| 45 | GO:0004004: ATP-dependent RNA helicase activity | 8.71E-03 |
| 46 | GO:0050897: cobalt ion binding | 1.04E-02 |
| 47 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.04E-02 |
| 48 | GO:0009055: electron carrier activity | 1.11E-02 |
| 49 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.21E-02 |
| 50 | GO:0004364: glutathione transferase activity | 1.28E-02 |
| 51 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.40E-02 |
| 52 | GO:0015293: symporter activity | 1.44E-02 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 2.14E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 2.14E-02 |
| 55 | GO:0004386: helicase activity | 2.23E-02 |
| 56 | GO:0019843: rRNA binding | 2.46E-02 |
| 57 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.70E-02 |
| 58 | GO:0005524: ATP binding | 2.83E-02 |
| 59 | GO:0003743: translation initiation factor activity | 3.46E-02 |
| 60 | GO:0008168: methyltransferase activity | 4.11E-02 |
| 61 | GO:0000287: magnesium ion binding | 4.17E-02 |
| 62 | GO:0003682: chromatin binding | 4.39E-02 |
| 63 | GO:0050660: flavin adenine dinucleotide binding | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 1.76E-05 |
| 4 | GO:0030687: preribosome, large subunit precursor | 1.82E-05 |
| 5 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 5.79E-05 |
| 6 | GO:0070545: PeBoW complex | 1.41E-04 |
| 7 | GO:0008250: oligosaccharyltransferase complex | 5.92E-04 |
| 8 | GO:0016282: eukaryotic 43S preinitiation complex | 7.24E-04 |
| 9 | GO:0005829: cytosol | 7.37E-04 |
| 10 | GO:0033290: eukaryotic 48S preinitiation complex | 8.63E-04 |
| 11 | GO:0034399: nuclear periphery | 1.16E-03 |
| 12 | GO:0000326: protein storage vacuole | 1.32E-03 |
| 13 | GO:0010494: cytoplasmic stress granule | 1.48E-03 |
| 14 | GO:0005736: DNA-directed RNA polymerase I complex | 1.48E-03 |
| 15 | GO:0005747: mitochondrial respiratory chain complex I | 1.85E-03 |
| 16 | GO:0031307: integral component of mitochondrial outer membrane | 2.21E-03 |
| 17 | GO:0043234: protein complex | 3.04E-03 |
| 18 | GO:0005759: mitochondrial matrix | 3.35E-03 |
| 19 | GO:0045271: respiratory chain complex I | 3.49E-03 |
| 20 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 6.21E-03 |
| 21 | GO:0032580: Golgi cisterna membrane | 6.88E-03 |
| 22 | GO:0005788: endoplasmic reticulum lumen | 8.08E-03 |
| 23 | GO:0005667: transcription factor complex | 8.40E-03 |
| 24 | GO:0005783: endoplasmic reticulum | 8.75E-03 |
| 25 | GO:0009505: plant-type cell wall | 1.04E-02 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 1.34E-02 |
| 27 | GO:0031966: mitochondrial membrane | 1.55E-02 |
| 28 | GO:0005834: heterotrimeric G-protein complex | 1.92E-02 |
| 29 | GO:0005777: peroxisome | 2.12E-02 |
| 30 | GO:0009506: plasmodesma | 2.61E-02 |
| 31 | GO:0005774: vacuolar membrane | 3.73E-02 |
| 32 | GO:0046658: anchored component of plasma membrane | 3.78E-02 |
| 33 | GO:0005634: nucleus | 3.88E-02 |
| 34 | GO:0005794: Golgi apparatus | 4.31E-02 |
| 35 | GO:0009536: plastid | 4.57E-02 |