GO Enrichment Analysis of Co-expressed Genes with
AT1G29660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0042371: vitamin K biosynthetic process | 4.04E-05 |
| 3 | GO:0060627: regulation of vesicle-mediated transport | 4.04E-05 |
| 4 | GO:0071258: cellular response to gravity | 1.00E-04 |
| 5 | GO:0006695: cholesterol biosynthetic process | 1.00E-04 |
| 6 | GO:0007017: microtubule-based process | 1.02E-04 |
| 7 | GO:0042742: defense response to bacterium | 1.11E-04 |
| 8 | GO:0000413: protein peptidyl-prolyl isomerization | 1.79E-04 |
| 9 | GO:0042335: cuticle development | 1.79E-04 |
| 10 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.55E-04 |
| 11 | GO:0006241: CTP biosynthetic process | 2.55E-04 |
| 12 | GO:0006165: nucleoside diphosphate phosphorylation | 2.55E-04 |
| 13 | GO:0006228: UTP biosynthetic process | 2.55E-04 |
| 14 | GO:0006424: glutamyl-tRNA aminoacylation | 2.55E-04 |
| 15 | GO:0010583: response to cyclopentenone | 2.59E-04 |
| 16 | GO:0015976: carbon utilization | 3.43E-04 |
| 17 | GO:0006183: GTP biosynthetic process | 3.43E-04 |
| 18 | GO:0032543: mitochondrial translation | 4.37E-04 |
| 19 | GO:0042549: photosystem II stabilization | 5.37E-04 |
| 20 | GO:0010555: response to mannitol | 6.40E-04 |
| 21 | GO:0042372: phylloquinone biosynthetic process | 6.40E-04 |
| 22 | GO:0006631: fatty acid metabolic process | 6.80E-04 |
| 23 | GO:0009610: response to symbiotic fungus | 7.49E-04 |
| 24 | GO:0007155: cell adhesion | 8.61E-04 |
| 25 | GO:0009642: response to light intensity | 8.61E-04 |
| 26 | GO:0009932: cell tip growth | 9.77E-04 |
| 27 | GO:0032544: plastid translation | 9.77E-04 |
| 28 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.10E-03 |
| 29 | GO:0033384: geranyl diphosphate biosynthetic process | 1.10E-03 |
| 30 | GO:0006783: heme biosynthetic process | 1.10E-03 |
| 31 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.22E-03 |
| 32 | GO:0006949: syncytium formation | 1.35E-03 |
| 33 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.35E-03 |
| 34 | GO:0009735: response to cytokinin | 1.58E-03 |
| 35 | GO:0009725: response to hormone | 1.77E-03 |
| 36 | GO:0010207: photosystem II assembly | 1.92E-03 |
| 37 | GO:0006633: fatty acid biosynthetic process | 2.12E-03 |
| 38 | GO:0019762: glucosinolate catabolic process | 2.23E-03 |
| 39 | GO:0006412: translation | 2.28E-03 |
| 40 | GO:0019344: cysteine biosynthetic process | 2.39E-03 |
| 41 | GO:0000027: ribosomal large subunit assembly | 2.39E-03 |
| 42 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.06E-03 |
| 43 | GO:0009411: response to UV | 3.06E-03 |
| 44 | GO:0019722: calcium-mediated signaling | 3.24E-03 |
| 45 | GO:0000271: polysaccharide biosynthetic process | 3.61E-03 |
| 46 | GO:0042254: ribosome biogenesis | 3.64E-03 |
| 47 | GO:0045489: pectin biosynthetic process | 3.80E-03 |
| 48 | GO:0007018: microtubule-based movement | 3.99E-03 |
| 49 | GO:0071554: cell wall organization or biogenesis | 4.38E-03 |
| 50 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.57E-03 |
| 51 | GO:0009828: plant-type cell wall loosening | 5.00E-03 |
| 52 | GO:0007267: cell-cell signaling | 5.21E-03 |
| 53 | GO:0045454: cell redox homeostasis | 5.28E-03 |
| 54 | GO:0006869: lipid transport | 5.79E-03 |
| 55 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 56 | GO:0016051: carbohydrate biosynthetic process | 7.99E-03 |
| 57 | GO:0042542: response to hydrogen peroxide | 9.27E-03 |
| 58 | GO:0009664: plant-type cell wall organization | 1.12E-02 |
| 59 | GO:0042538: hyperosmotic salinity response | 1.12E-02 |
| 60 | GO:0009585: red, far-red light phototransduction | 1.18E-02 |
| 61 | GO:0006457: protein folding | 1.50E-02 |
| 62 | GO:0009651: response to salt stress | 2.00E-02 |
| 63 | GO:0071555: cell wall organization | 2.35E-02 |
| 64 | GO:0009826: unidimensional cell growth | 2.95E-02 |
| 65 | GO:0009409: response to cold | 3.18E-02 |
| 66 | GO:0046686: response to cadmium ion | 3.65E-02 |
| 67 | GO:0015979: photosynthesis | 3.89E-02 |
| 68 | GO:0006886: intracellular protein transport | 4.11E-02 |
| 69 | GO:0055114: oxidation-reduction process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0019843: rRNA binding | 6.45E-06 |
| 5 | GO:0051920: peroxiredoxin activity | 7.36E-06 |
| 6 | GO:0016209: antioxidant activity | 1.36E-05 |
| 7 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 4.04E-05 |
| 8 | GO:0004655: porphobilinogen synthase activity | 4.04E-05 |
| 9 | GO:0030267: glyoxylate reductase (NADP) activity | 1.73E-04 |
| 10 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.73E-04 |
| 11 | GO:0070330: aromatase activity | 1.73E-04 |
| 12 | GO:0004550: nucleoside diphosphate kinase activity | 2.55E-04 |
| 13 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.14E-04 |
| 14 | GO:0005200: structural constituent of cytoskeleton | 3.14E-04 |
| 15 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 3.43E-04 |
| 16 | GO:0003735: structural constituent of ribosome | 4.22E-04 |
| 17 | GO:0018685: alkane 1-monooxygenase activity | 4.37E-04 |
| 18 | GO:0016208: AMP binding | 5.37E-04 |
| 19 | GO:0102391: decanoate--CoA ligase activity | 6.40E-04 |
| 20 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 6.40E-04 |
| 21 | GO:0004467: long-chain fatty acid-CoA ligase activity | 7.49E-04 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.52E-04 |
| 23 | GO:0004337: geranyltranstransferase activity | 1.10E-03 |
| 24 | GO:0004161: dimethylallyltranstransferase activity | 1.49E-03 |
| 25 | GO:0004089: carbonate dehydratase activity | 1.77E-03 |
| 26 | GO:0008266: poly(U) RNA binding | 1.92E-03 |
| 27 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.89E-03 |
| 28 | GO:0004601: peroxidase activity | 3.57E-03 |
| 29 | GO:0016413: O-acetyltransferase activity | 5.42E-03 |
| 30 | GO:0102483: scopolin beta-glucosidase activity | 6.31E-03 |
| 31 | GO:0003924: GTPase activity | 6.50E-03 |
| 32 | GO:0008422: beta-glucosidase activity | 8.49E-03 |
| 33 | GO:0008289: lipid binding | 9.05E-03 |
| 34 | GO:0003777: microtubule motor activity | 1.26E-02 |
| 35 | GO:0005507: copper ion binding | 1.65E-02 |
| 36 | GO:0016758: transferase activity, transferring hexosyl groups | 1.74E-02 |
| 37 | GO:0005525: GTP binding | 1.91E-02 |
| 38 | GO:0005524: ATP binding | 2.11E-02 |
| 39 | GO:0008017: microtubule binding | 2.30E-02 |
| 40 | GO:0004672: protein kinase activity | 3.45E-02 |
| 41 | GO:0052689: carboxylic ester hydrolase activity | 3.80E-02 |
| 42 | GO:0004871: signal transducer activity | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 4.90E-13 |
| 2 | GO:0009507: chloroplast | 4.68E-08 |
| 3 | GO:0009579: thylakoid | 1.03E-07 |
| 4 | GO:0046658: anchored component of plasma membrane | 8.10E-07 |
| 5 | GO:0009941: chloroplast envelope | 1.06E-06 |
| 6 | GO:0009505: plant-type cell wall | 1.39E-06 |
| 7 | GO:0048046: apoplast | 4.39E-06 |
| 8 | GO:0045298: tubulin complex | 2.21E-05 |
| 9 | GO:0031977: thylakoid lumen | 3.49E-05 |
| 10 | GO:0009547: plastid ribosome | 4.04E-05 |
| 11 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 4.04E-05 |
| 12 | GO:0000311: plastid large ribosomal subunit | 4.67E-05 |
| 13 | GO:0031225: anchored component of membrane | 6.38E-05 |
| 14 | GO:0009535: chloroplast thylakoid membrane | 8.51E-05 |
| 15 | GO:0022626: cytosolic ribosome | 2.36E-04 |
| 16 | GO:0010319: stromule | 3.14E-04 |
| 17 | GO:0005840: ribosome | 8.14E-04 |
| 18 | GO:0016020: membrane | 9.55E-04 |
| 19 | GO:0005774: vacuolar membrane | 1.12E-03 |
| 20 | GO:0005618: cell wall | 1.41E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 1.70E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 1.92E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 2.55E-03 |
| 24 | GO:0005576: extracellular region | 2.68E-03 |
| 25 | GO:0005871: kinesin complex | 3.42E-03 |
| 26 | GO:0009506: plasmodesma | 3.44E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 4.19E-03 |
| 28 | GO:0005874: microtubule | 4.27E-03 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 4.64E-03 |
| 30 | GO:0005778: peroxisomal membrane | 5.21E-03 |
| 31 | GO:0005777: peroxisome | 1.33E-02 |
| 32 | GO:0005773: vacuole | 3.54E-02 |
| 33 | GO:0031969: chloroplast membrane | 3.54E-02 |