Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G29460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0033231: carbohydrate export0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
5GO:0009733: response to auxin3.39E-06
6GO:0009734: auxin-activated signaling pathway3.94E-06
7GO:0009926: auxin polar transport1.83E-05
8GO:0009750: response to fructose2.22E-05
9GO:0015671: oxygen transport2.76E-05
10GO:0043007: maintenance of rDNA2.76E-05
11GO:1902334: fructose export from vacuole to cytoplasm2.76E-05
12GO:0015755: fructose transport2.76E-05
13GO:0010541: acropetal auxin transport7.01E-05
14GO:0048443: stamen development8.92E-05
15GO:0040008: regulation of growth1.09E-04
16GO:0010160: formation of animal organ boundary1.23E-04
17GO:0051513: regulation of monopolar cell growth1.83E-04
18GO:0043481: anthocyanin accumulation in tissues in response to UV light1.83E-04
19GO:0006656: phosphatidylcholine biosynthetic process3.18E-04
20GO:0060918: auxin transport3.92E-04
21GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.92E-04
22GO:0009228: thiamine biosynthetic process3.92E-04
23GO:0009640: photomorphogenesis4.63E-04
24GO:0009942: longitudinal axis specification4.69E-04
25GO:0050829: defense response to Gram-negative bacterium5.49E-04
26GO:0009664: plant-type cell wall organization5.76E-04
27GO:0046620: regulation of organ growth6.32E-04
28GO:0007389: pattern specification process7.18E-04
29GO:0010206: photosystem II repair8.07E-04
30GO:0048589: developmental growth8.07E-04
31GO:0019432: triglyceride biosynthetic process8.07E-04
32GO:0009740: gibberellic acid mediated signaling pathway8.15E-04
33GO:0006949: syncytium formation9.92E-04
34GO:0006995: cellular response to nitrogen starvation9.92E-04
35GO:0007275: multicellular organism development9.97E-04
36GO:0009698: phenylpropanoid metabolic process1.09E-03
37GO:0010152: pollen maturation1.19E-03
38GO:0008361: regulation of cell size1.19E-03
39GO:0055085: transmembrane transport1.29E-03
40GO:0010540: basipetal auxin transport1.40E-03
41GO:0006833: water transport1.62E-03
42GO:0007017: microtubule-based process1.85E-03
43GO:0016114: terpenoid biosynthetic process1.97E-03
44GO:0051260: protein homooligomerization1.97E-03
45GO:0009826: unidimensional cell growth2.14E-03
46GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.22E-03
47GO:0070417: cellular response to cold2.48E-03
48GO:0034220: ion transmembrane transport2.61E-03
49GO:0009958: positive gravitropism2.74E-03
50GO:0009741: response to brassinosteroid2.74E-03
51GO:0009646: response to absence of light2.88E-03
52GO:0009749: response to glucose3.02E-03
53GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.16E-03
54GO:0010583: response to cyclopentenone3.31E-03
55GO:0009639: response to red or far red light3.60E-03
56GO:0009828: plant-type cell wall loosening3.60E-03
57GO:0010252: auxin homeostasis3.60E-03
58GO:0048364: root development4.20E-03
59GO:0015995: chlorophyll biosynthetic process4.54E-03
60GO:0010218: response to far red light5.21E-03
61GO:0048527: lateral root development5.38E-03
62GO:0009637: response to blue light5.73E-03
63GO:0006631: fatty acid metabolic process6.45E-03
64GO:0009744: response to sucrose6.82E-03
65GO:0042545: cell wall modification1.05E-02
66GO:0009742: brassinosteroid mediated signaling pathway1.12E-02
67GO:0007623: circadian rhythm1.58E-02
68GO:0045490: pectin catabolic process1.58E-02
69GO:0009739: response to gibberellin1.71E-02
70GO:0009409: response to cold1.96E-02
71GO:0080167: response to karrikin2.51E-02
72GO:0046777: protein autophosphorylation2.64E-02
73GO:0045454: cell redox homeostasis2.86E-02
74GO:0032259: methylation3.22E-02
75GO:0016042: lipid catabolic process3.25E-02
76GO:0006281: DNA repair3.32E-02
77GO:0009735: response to cytokinin4.68E-02
78GO:0009555: pollen development4.99E-02
RankGO TermAdjusted P value
1GO:0015284: fructose uniporter activity0.00E+00
2GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
3GO:0005344: oxygen transporter activity2.76E-05
4GO:0010329: auxin efflux transmembrane transporter activity3.08E-05
5GO:0005353: fructose transmembrane transporter activity7.01E-05
6GO:0000234: phosphoethanolamine N-methyltransferase activity7.01E-05
7GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity7.01E-05
8GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.01E-05
9GO:0010011: auxin binding2.48E-04
10GO:0016832: aldehyde-lyase activity4.69E-04
11GO:0009672: auxin:proton symporter activity8.99E-04
12GO:0008794: arsenate reductase (glutaredoxin) activity1.09E-03
13GO:0031072: heat shock protein binding1.29E-03
14GO:0051119: sugar transmembrane transporter activity1.50E-03
15GO:0003756: protein disulfide isomerase activity2.35E-03
16GO:0005200: structural constituent of cytoskeleton3.75E-03
17GO:0015250: water channel activity4.06E-03
18GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.70E-03
19GO:0005096: GTPase activator activity5.04E-03
20GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.38E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity6.09E-03
22GO:0004185: serine-type carboxypeptidase activity6.82E-03
23GO:0051537: 2 iron, 2 sulfur cluster binding7.20E-03
24GO:0045330: aspartyl esterase activity9.01E-03
25GO:0004650: polygalacturonase activity1.01E-02
26GO:0030599: pectinesterase activity1.03E-02
27GO:0051082: unfolded protein binding1.07E-02
28GO:0015035: protein disulfide oxidoreductase activity1.10E-02
29GO:0016829: lyase activity1.33E-02
30GO:0046910: pectinesterase inhibitor activity1.51E-02
31GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.88E-02
32GO:0046982: protein heterodimerization activity2.13E-02
33GO:0016788: hydrolase activity, acting on ester bonds2.19E-02
34GO:0050660: flavin adenine dinucleotide binding2.39E-02
35GO:0052689: carboxylic ester hydrolase activity2.70E-02
36GO:0005515: protein binding3.19E-02
37GO:0003924: GTPase activity3.32E-02
38GO:0009055: electron carrier activity3.49E-02
39GO:0008289: lipid binding4.20E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009531: secondary cell wall1.83E-04
3GO:0045298: tubulin complex8.07E-04
4GO:0009534: chloroplast thylakoid1.22E-03
5GO:0016602: CCAAT-binding factor complex1.29E-03
6GO:0009505: plant-type cell wall3.09E-03
7GO:0071944: cell periphery3.45E-03
8GO:0009570: chloroplast stroma6.15E-03
9GO:0009535: chloroplast thylakoid membrane6.44E-03
10GO:0031977: thylakoid lumen6.45E-03
11GO:0005886: plasma membrane8.91E-03
12GO:0009543: chloroplast thylakoid lumen1.26E-02
13GO:0005623: cell1.28E-02
14GO:0005618: cell wall1.33E-02
15GO:0009705: plant-type vacuole membrane1.58E-02
16GO:0005773: vacuole1.93E-02
17GO:0005576: extracellular region2.41E-02
18GO:0005874: microtubule2.45E-02
19GO:0005887: integral component of plasma membrane4.13E-02
Gene type



Gene DE type