GO Enrichment Analysis of Co-expressed Genes with
AT1G27930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0009877: nodulation | 0.00E+00 |
| 3 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 4 | GO:0030644: cellular chloride ion homeostasis | 0.00E+00 |
| 5 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 6 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.80E-23 |
| 8 | GO:0015979: photosynthesis | 5.32E-17 |
| 9 | GO:0018298: protein-chromophore linkage | 1.33E-14 |
| 10 | GO:0009645: response to low light intensity stimulus | 2.86E-09 |
| 11 | GO:0010218: response to far red light | 6.61E-09 |
| 12 | GO:0010114: response to red light | 2.40E-08 |
| 13 | GO:0009644: response to high light intensity | 3.10E-08 |
| 14 | GO:0009637: response to blue light | 4.57E-07 |
| 15 | GO:0009769: photosynthesis, light harvesting in photosystem II | 6.12E-07 |
| 16 | GO:0009416: response to light stimulus | 9.29E-07 |
| 17 | GO:0009409: response to cold | 4.30E-06 |
| 18 | GO:0015995: chlorophyll biosynthetic process | 7.06E-06 |
| 19 | GO:0007623: circadian rhythm | 1.95E-05 |
| 20 | GO:0010196: nonphotochemical quenching | 6.38E-05 |
| 21 | GO:0080167: response to karrikin | 8.55E-05 |
| 22 | GO:0015812: gamma-aminobutyric acid transport | 1.27E-04 |
| 23 | GO:0006883: cellular sodium ion homeostasis | 2.94E-04 |
| 24 | GO:0051170: nuclear import | 2.94E-04 |
| 25 | GO:1902884: positive regulation of response to oxidative stress | 2.94E-04 |
| 26 | GO:0030259: lipid glycosylation | 2.94E-04 |
| 27 | GO:0042542: response to hydrogen peroxide | 3.34E-04 |
| 28 | GO:1902448: positive regulation of shade avoidance | 4.86E-04 |
| 29 | GO:0006598: polyamine catabolic process | 4.86E-04 |
| 30 | GO:1901562: response to paraquat | 4.86E-04 |
| 31 | GO:0048511: rhythmic process | 5.39E-04 |
| 32 | GO:0010017: red or far-red light signaling pathway | 5.89E-04 |
| 33 | GO:0044211: CTP salvage | 6.95E-04 |
| 34 | GO:0031936: negative regulation of chromatin silencing | 6.95E-04 |
| 35 | GO:0009765: photosynthesis, light harvesting | 9.21E-04 |
| 36 | GO:2000306: positive regulation of photomorphogenesis | 9.21E-04 |
| 37 | GO:0006109: regulation of carbohydrate metabolic process | 9.21E-04 |
| 38 | GO:0010600: regulation of auxin biosynthetic process | 9.21E-04 |
| 39 | GO:0044206: UMP salvage | 9.21E-04 |
| 40 | GO:1901002: positive regulation of response to salt stress | 9.21E-04 |
| 41 | GO:0030104: water homeostasis | 9.21E-04 |
| 42 | GO:0016123: xanthophyll biosynthetic process | 1.16E-03 |
| 43 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 1.16E-03 |
| 44 | GO:0043097: pyrimidine nucleoside salvage | 1.16E-03 |
| 45 | GO:0055114: oxidation-reduction process | 1.32E-03 |
| 46 | GO:0045962: positive regulation of development, heterochronic | 1.43E-03 |
| 47 | GO:0006206: pyrimidine nucleobase metabolic process | 1.43E-03 |
| 48 | GO:0045040: protein import into mitochondrial outer membrane | 1.43E-03 |
| 49 | GO:0002238: response to molecule of fungal origin | 1.43E-03 |
| 50 | GO:0009635: response to herbicide | 1.43E-03 |
| 51 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.71E-03 |
| 52 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.71E-03 |
| 53 | GO:0010161: red light signaling pathway | 2.01E-03 |
| 54 | GO:0080111: DNA demethylation | 2.01E-03 |
| 55 | GO:0000160: phosphorelay signal transduction system | 2.06E-03 |
| 56 | GO:0009735: response to cytokinin | 2.32E-03 |
| 57 | GO:0010928: regulation of auxin mediated signaling pathway | 2.32E-03 |
| 58 | GO:0042255: ribosome assembly | 2.32E-03 |
| 59 | GO:0010078: maintenance of root meristem identity | 2.32E-03 |
| 60 | GO:0009704: de-etiolation | 2.32E-03 |
| 61 | GO:0010099: regulation of photomorphogenesis | 2.65E-03 |
| 62 | GO:0009658: chloroplast organization | 2.75E-03 |
| 63 | GO:0090333: regulation of stomatal closure | 3.00E-03 |
| 64 | GO:0009640: photomorphogenesis | 3.19E-03 |
| 65 | GO:0030042: actin filament depolymerization | 3.36E-03 |
| 66 | GO:0008643: carbohydrate transport | 3.45E-03 |
| 67 | GO:0009641: shade avoidance | 3.73E-03 |
| 68 | GO:0009970: cellular response to sulfate starvation | 3.73E-03 |
| 69 | GO:0006995: cellular response to nitrogen starvation | 3.73E-03 |
| 70 | GO:0055062: phosphate ion homeostasis | 3.73E-03 |
| 71 | GO:0009688: abscisic acid biosynthetic process | 3.73E-03 |
| 72 | GO:0042538: hyperosmotic salinity response | 3.99E-03 |
| 73 | GO:0044550: secondary metabolite biosynthetic process | 4.01E-03 |
| 74 | GO:0006355: regulation of transcription, DNA-templated | 4.02E-03 |
| 75 | GO:0046856: phosphatidylinositol dephosphorylation | 4.12E-03 |
| 76 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.12E-03 |
| 77 | GO:0030148: sphingolipid biosynthetic process | 4.12E-03 |
| 78 | GO:0006351: transcription, DNA-templated | 4.29E-03 |
| 79 | GO:0009585: red, far-red light phototransduction | 4.29E-03 |
| 80 | GO:0016925: protein sumoylation | 4.52E-03 |
| 81 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.93E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 4.93E-03 |
| 83 | GO:0006626: protein targeting to mitochondrion | 4.93E-03 |
| 84 | GO:0050826: response to freezing | 4.93E-03 |
| 85 | GO:0018107: peptidyl-threonine phosphorylation | 4.93E-03 |
| 86 | GO:0009266: response to temperature stimulus | 5.36E-03 |
| 87 | GO:0010207: photosystem II assembly | 5.36E-03 |
| 88 | GO:0007015: actin filament organization | 5.36E-03 |
| 89 | GO:0090351: seedling development | 5.80E-03 |
| 90 | GO:0006629: lipid metabolic process | 5.91E-03 |
| 91 | GO:0010431: seed maturation | 7.68E-03 |
| 92 | GO:0009269: response to desiccation | 7.68E-03 |
| 93 | GO:0003333: amino acid transmembrane transport | 7.68E-03 |
| 94 | GO:0009058: biosynthetic process | 8.04E-03 |
| 95 | GO:0071215: cellular response to abscisic acid stimulus | 8.69E-03 |
| 96 | GO:0070417: cellular response to cold | 9.75E-03 |
| 97 | GO:0010182: sugar mediated signaling pathway | 1.09E-02 |
| 98 | GO:0042752: regulation of circadian rhythm | 1.14E-02 |
| 99 | GO:0006814: sodium ion transport | 1.14E-02 |
| 100 | GO:0000302: response to reactive oxygen species | 1.26E-02 |
| 101 | GO:0032502: developmental process | 1.32E-02 |
| 102 | GO:1901657: glycosyl compound metabolic process | 1.38E-02 |
| 103 | GO:0010286: heat acclimation | 1.50E-02 |
| 104 | GO:0046686: response to cadmium ion | 1.51E-02 |
| 105 | GO:0009651: response to salt stress | 1.57E-02 |
| 106 | GO:0016579: protein deubiquitination | 1.57E-02 |
| 107 | GO:0006970: response to osmotic stress | 1.76E-02 |
| 108 | GO:0048573: photoperiodism, flowering | 1.83E-02 |
| 109 | GO:0009723: response to ethylene | 1.89E-02 |
| 110 | GO:0048481: plant ovule development | 1.97E-02 |
| 111 | GO:0010200: response to chitin | 2.10E-02 |
| 112 | GO:0009631: cold acclimation | 2.19E-02 |
| 113 | GO:0010119: regulation of stomatal movement | 2.19E-02 |
| 114 | GO:0009737: response to abscisic acid | 2.41E-02 |
| 115 | GO:0045892: negative regulation of transcription, DNA-templated | 2.47E-02 |
| 116 | GO:0051707: response to other organism | 2.80E-02 |
| 117 | GO:0009414: response to water deprivation | 2.89E-02 |
| 118 | GO:0009408: response to heat | 2.99E-02 |
| 119 | GO:0009965: leaf morphogenesis | 3.04E-02 |
| 120 | GO:0006812: cation transport | 3.29E-02 |
| 121 | GO:0009909: regulation of flower development | 3.72E-02 |
| 122 | GO:0043086: negative regulation of catalytic activity | 3.89E-02 |
| 123 | GO:0009624: response to nematode | 4.44E-02 |
| 124 | GO:0018105: peptidyl-serine phosphorylation | 4.53E-02 |
| 125 | GO:0009908: flower development | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 3 | GO:0019912: cyclin-dependent protein kinase activating kinase activity | 0.00E+00 |
| 4 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 5 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 6 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 8 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 9 | GO:0030943: mitochondrion targeting sequence binding | 0.00E+00 |
| 10 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 11 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 12 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 13 | GO:0031409: pigment binding | 6.96E-21 |
| 14 | GO:0016168: chlorophyll binding | 4.24E-17 |
| 15 | GO:0005515: protein binding | 4.42E-05 |
| 16 | GO:0046872: metal ion binding | 4.99E-05 |
| 17 | GO:0080079: cellobiose glucosidase activity | 1.27E-04 |
| 18 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.27E-04 |
| 19 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.27E-04 |
| 20 | GO:0016630: protochlorophyllide reductase activity | 2.94E-04 |
| 21 | GO:0015180: L-alanine transmembrane transporter activity | 2.94E-04 |
| 22 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 2.94E-04 |
| 23 | GO:0046592: polyamine oxidase activity | 4.86E-04 |
| 24 | GO:0019948: SUMO activating enzyme activity | 4.86E-04 |
| 25 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.86E-04 |
| 26 | GO:0004096: catalase activity | 4.86E-04 |
| 27 | GO:0015189: L-lysine transmembrane transporter activity | 6.95E-04 |
| 28 | GO:0015181: arginine transmembrane transporter activity | 6.95E-04 |
| 29 | GO:0004845: uracil phosphoribosyltransferase activity | 9.21E-04 |
| 30 | GO:0005313: L-glutamate transmembrane transporter activity | 9.21E-04 |
| 31 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.10E-03 |
| 32 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.16E-03 |
| 33 | GO:0000156: phosphorelay response regulator activity | 1.20E-03 |
| 34 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.43E-03 |
| 35 | GO:0015297: antiporter activity | 1.49E-03 |
| 36 | GO:0004849: uridine kinase activity | 1.71E-03 |
| 37 | GO:0003993: acid phosphatase activity | 2.59E-03 |
| 38 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 2.65E-03 |
| 39 | GO:0071949: FAD binding | 3.00E-03 |
| 40 | GO:0000989: transcription factor activity, transcription factor binding | 3.00E-03 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.45E-03 |
| 42 | GO:0047372: acylglycerol lipase activity | 4.12E-03 |
| 43 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 4.52E-03 |
| 44 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.93E-03 |
| 45 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.93E-03 |
| 46 | GO:0008131: primary amine oxidase activity | 5.36E-03 |
| 47 | GO:0003712: transcription cofactor activity | 5.80E-03 |
| 48 | GO:0005506: iron ion binding | 7.56E-03 |
| 49 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 7.68E-03 |
| 50 | GO:0004707: MAP kinase activity | 7.68E-03 |
| 51 | GO:0008514: organic anion transmembrane transporter activity | 9.21E-03 |
| 52 | GO:0003727: single-stranded RNA binding | 9.21E-03 |
| 53 | GO:0005351: sugar:proton symporter activity | 1.03E-02 |
| 54 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.26E-02 |
| 55 | GO:0003677: DNA binding | 1.36E-02 |
| 56 | GO:0020037: heme binding | 1.54E-02 |
| 57 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.76E-02 |
| 58 | GO:0102483: scopolin beta-glucosidase activity | 1.83E-02 |
| 59 | GO:0004497: monooxygenase activity | 2.03E-02 |
| 60 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.11E-02 |
| 61 | GO:0050897: cobalt ion binding | 2.19E-02 |
| 62 | GO:0016787: hydrolase activity | 2.43E-02 |
| 63 | GO:0008422: beta-glucosidase activity | 2.48E-02 |
| 64 | GO:0042393: histone binding | 2.56E-02 |
| 65 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.62E-02 |
| 66 | GO:0005198: structural molecule activity | 3.04E-02 |
| 67 | GO:0015293: symporter activity | 3.04E-02 |
| 68 | GO:0015171: amino acid transmembrane transporter activity | 3.72E-02 |
| 69 | GO:0031625: ubiquitin protein ligase binding | 3.72E-02 |
| 70 | GO:0045735: nutrient reservoir activity | 3.89E-02 |
| 71 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.16E-02 |
| 72 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.16E-02 |
| 73 | GO:0016491: oxidoreductase activity | 4.18E-02 |
| 74 | GO:0016874: ligase activity | 4.26E-02 |
| 75 | GO:0022857: transmembrane transporter activity | 4.26E-02 |
| 76 | GO:0003779: actin binding | 4.35E-02 |
| 77 | GO:0015035: protein disulfide oxidoreductase activity | 4.53E-02 |
| 78 | GO:0008270: zinc ion binding | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.44E-18 |
| 3 | GO:0009522: photosystem I | 1.61E-18 |
| 4 | GO:0009941: chloroplast envelope | 8.57E-18 |
| 5 | GO:0010287: plastoglobule | 5.53E-17 |
| 6 | GO:0009534: chloroplast thylakoid | 9.31E-17 |
| 7 | GO:0030076: light-harvesting complex | 2.89E-16 |
| 8 | GO:0009579: thylakoid | 2.32E-15 |
| 9 | GO:0009523: photosystem II | 3.28E-08 |
| 10 | GO:0009507: chloroplast | 7.76E-08 |
| 11 | GO:0042651: thylakoid membrane | 3.41E-07 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 1.36E-05 |
| 13 | GO:0016020: membrane | 3.81E-05 |
| 14 | GO:0009538: photosystem I reaction center | 8.26E-05 |
| 15 | GO:0016021: integral component of membrane | 1.75E-04 |
| 16 | GO:0009706: chloroplast inner membrane | 8.05E-04 |
| 17 | GO:0009898: cytoplasmic side of plasma membrane | 9.21E-04 |
| 18 | GO:0032586: protein storage vacuole membrane | 9.21E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 2.01E-03 |
| 20 | GO:0000326: protein storage vacuole | 2.65E-03 |
| 21 | GO:0005740: mitochondrial envelope | 3.73E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 5.36E-03 |
| 23 | GO:0005622: intracellular | 6.35E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 7.19E-03 |
| 25 | GO:0005623: cell | 7.82E-03 |
| 26 | GO:0015629: actin cytoskeleton | 8.69E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 1.20E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 1.97E-02 |
| 29 | GO:0000151: ubiquitin ligase complex | 1.97E-02 |
| 30 | GO:0031969: chloroplast membrane | 2.03E-02 |
| 31 | GO:0031977: thylakoid lumen | 2.64E-02 |
| 32 | GO:0031966: mitochondrial membrane | 3.29E-02 |
| 33 | GO:0016607: nuclear speck | 3.98E-02 |