GO Enrichment Analysis of Co-expressed Genes with
AT1G27700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006573: valine metabolic process | 0.00E+00 |
| 2 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 3 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 6 | GO:0006216: cytidine catabolic process | 0.00E+00 |
| 7 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 8 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 9 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.30E-05 |
| 10 | GO:0006458: 'de novo' protein folding | 7.27E-05 |
| 11 | GO:0042026: protein refolding | 7.27E-05 |
| 12 | GO:0008610: lipid biosynthetic process | 1.25E-04 |
| 13 | GO:0006551: leucine metabolic process | 1.67E-04 |
| 14 | GO:0000066: mitochondrial ornithine transport | 1.67E-04 |
| 15 | GO:0009629: response to gravity | 3.78E-04 |
| 16 | GO:0019388: galactose catabolic process | 3.78E-04 |
| 17 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.78E-04 |
| 18 | GO:2000123: positive regulation of stomatal complex development | 3.78E-04 |
| 19 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.78E-04 |
| 20 | GO:0009767: photosynthetic electron transport chain | 4.10E-04 |
| 21 | GO:0019253: reductive pentose-phosphate cycle | 4.63E-04 |
| 22 | GO:0010020: chloroplast fission | 4.63E-04 |
| 23 | GO:0010338: leaf formation | 6.19E-04 |
| 24 | GO:0061077: chaperone-mediated protein folding | 7.70E-04 |
| 25 | GO:0007005: mitochondrion organization | 8.40E-04 |
| 26 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.83E-04 |
| 27 | GO:0033014: tetrapyrrole biosynthetic process | 8.83E-04 |
| 28 | GO:0009590: detection of gravity | 8.83E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.83E-04 |
| 30 | GO:0010239: chloroplast mRNA processing | 8.83E-04 |
| 31 | GO:2000038: regulation of stomatal complex development | 1.17E-03 |
| 32 | GO:0006546: glycine catabolic process | 1.17E-03 |
| 33 | GO:0006479: protein methylation | 1.17E-03 |
| 34 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.17E-03 |
| 35 | GO:0045088: regulation of innate immune response | 1.17E-03 |
| 36 | GO:0006342: chromatin silencing | 1.24E-03 |
| 37 | GO:0045489: pectin biosynthetic process | 1.24E-03 |
| 38 | GO:0010236: plastoquinone biosynthetic process | 1.48E-03 |
| 39 | GO:0016123: xanthophyll biosynthetic process | 1.48E-03 |
| 40 | GO:0010375: stomatal complex patterning | 1.48E-03 |
| 41 | GO:0006796: phosphate-containing compound metabolic process | 1.83E-03 |
| 42 | GO:0009972: cytidine deamination | 1.83E-03 |
| 43 | GO:0006555: methionine metabolic process | 1.83E-03 |
| 44 | GO:0006810: transport | 2.06E-03 |
| 45 | GO:0009094: L-phenylalanine biosynthetic process | 2.19E-03 |
| 46 | GO:1901259: chloroplast rRNA processing | 2.19E-03 |
| 47 | GO:0009082: branched-chain amino acid biosynthetic process | 2.19E-03 |
| 48 | GO:0017148: negative regulation of translation | 2.19E-03 |
| 49 | GO:0009099: valine biosynthetic process | 2.19E-03 |
| 50 | GO:0046686: response to cadmium ion | 2.32E-03 |
| 51 | GO:0006826: iron ion transport | 2.58E-03 |
| 52 | GO:0006880: intracellular sequestering of iron ion | 2.58E-03 |
| 53 | GO:0009813: flavonoid biosynthetic process | 2.98E-03 |
| 54 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.99E-03 |
| 55 | GO:0000105: histidine biosynthetic process | 2.99E-03 |
| 56 | GO:0052543: callose deposition in cell wall | 2.99E-03 |
| 57 | GO:0007155: cell adhesion | 2.99E-03 |
| 58 | GO:0005978: glycogen biosynthetic process | 2.99E-03 |
| 59 | GO:0009097: isoleucine biosynthetic process | 3.41E-03 |
| 60 | GO:0044030: regulation of DNA methylation | 3.41E-03 |
| 61 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 3.41E-03 |
| 62 | GO:0006783: heme biosynthetic process | 3.86E-03 |
| 63 | GO:0048589: developmental growth | 3.86E-03 |
| 64 | GO:0009056: catabolic process | 3.86E-03 |
| 65 | GO:0008356: asymmetric cell division | 4.33E-03 |
| 66 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.33E-03 |
| 67 | GO:0035999: tetrahydrofolate interconversion | 4.33E-03 |
| 68 | GO:0051555: flavonol biosynthetic process | 4.81E-03 |
| 69 | GO:0019684: photosynthesis, light reaction | 5.32E-03 |
| 70 | GO:0006879: cellular iron ion homeostasis | 5.32E-03 |
| 71 | GO:0000272: polysaccharide catabolic process | 5.32E-03 |
| 72 | GO:0048229: gametophyte development | 5.32E-03 |
| 73 | GO:0006006: glucose metabolic process | 6.38E-03 |
| 74 | GO:0010039: response to iron ion | 7.50E-03 |
| 75 | GO:0007010: cytoskeleton organization | 8.70E-03 |
| 76 | GO:0009944: polarity specification of adaxial/abaxial axis | 8.70E-03 |
| 77 | GO:0007017: microtubule-based process | 9.33E-03 |
| 78 | GO:0006730: one-carbon metabolic process | 1.06E-02 |
| 79 | GO:0080092: regulation of pollen tube growth | 1.06E-02 |
| 80 | GO:0009411: response to UV | 1.13E-02 |
| 81 | GO:0040007: growth | 1.13E-02 |
| 82 | GO:0006284: base-excision repair | 1.20E-02 |
| 83 | GO:0016117: carotenoid biosynthetic process | 1.27E-02 |
| 84 | GO:0009790: embryo development | 1.30E-02 |
| 85 | GO:0000271: polysaccharide biosynthetic process | 1.34E-02 |
| 86 | GO:0042742: defense response to bacterium | 1.37E-02 |
| 87 | GO:0008360: regulation of cell shape | 1.41E-02 |
| 88 | GO:0009741: response to brassinosteroid | 1.41E-02 |
| 89 | GO:0009646: response to absence of light | 1.49E-02 |
| 90 | GO:0019252: starch biosynthetic process | 1.56E-02 |
| 91 | GO:0055072: iron ion homeostasis | 1.56E-02 |
| 92 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 93 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.64E-02 |
| 94 | GO:0032502: developmental process | 1.72E-02 |
| 95 | GO:0009908: flower development | 1.73E-02 |
| 96 | GO:0009735: response to cytokinin | 1.76E-02 |
| 97 | GO:0010468: regulation of gene expression | 1.83E-02 |
| 98 | GO:0016125: sterol metabolic process | 1.88E-02 |
| 99 | GO:0006904: vesicle docking involved in exocytosis | 1.96E-02 |
| 100 | GO:0007267: cell-cell signaling | 1.96E-02 |
| 101 | GO:0009416: response to light stimulus | 1.97E-02 |
| 102 | GO:0006468: protein phosphorylation | 2.06E-02 |
| 103 | GO:0055114: oxidation-reduction process | 2.12E-02 |
| 104 | GO:0009615: response to virus | 2.13E-02 |
| 105 | GO:0009658: chloroplast organization | 2.38E-02 |
| 106 | GO:0018298: protein-chromophore linkage | 2.57E-02 |
| 107 | GO:0009817: defense response to fungus, incompatible interaction | 2.57E-02 |
| 108 | GO:0010311: lateral root formation | 2.67E-02 |
| 109 | GO:0048767: root hair elongation | 2.67E-02 |
| 110 | GO:0009407: toxin catabolic process | 2.76E-02 |
| 111 | GO:0080167: response to karrikin | 2.95E-02 |
| 112 | GO:0016051: carbohydrate biosynthetic process | 3.05E-02 |
| 113 | GO:0009853: photorespiration | 3.05E-02 |
| 114 | GO:0006839: mitochondrial transport | 3.34E-02 |
| 115 | GO:0006887: exocytosis | 3.44E-02 |
| 116 | GO:0006631: fatty acid metabolic process | 3.44E-02 |
| 117 | GO:0045892: negative regulation of transcription, DNA-templated | 3.58E-02 |
| 118 | GO:0009926: auxin polar transport | 3.65E-02 |
| 119 | GO:0009744: response to sucrose | 3.65E-02 |
| 120 | GO:0009636: response to toxic substance | 3.96E-02 |
| 121 | GO:0009965: leaf morphogenesis | 3.96E-02 |
| 122 | GO:0006281: DNA repair | 4.34E-02 |
| 123 | GO:0010224: response to UV-B | 4.62E-02 |
| 124 | GO:0009753: response to jasmonic acid | 4.65E-02 |
| 125 | GO:0008152: metabolic process | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047844: deoxycytidine deaminase activity | 0.00E+00 |
| 2 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 3 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 4 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 5 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 7.27E-05 |
| 6 | GO:0004325: ferrochelatase activity | 1.67E-04 |
| 7 | GO:0010313: phytochrome binding | 1.67E-04 |
| 8 | GO:0003984: acetolactate synthase activity | 1.67E-04 |
| 9 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.67E-04 |
| 10 | GO:0045486: naringenin 3-dioxygenase activity | 1.67E-04 |
| 11 | GO:0004400: histidinol-phosphate transaminase activity | 1.67E-04 |
| 12 | GO:0016597: amino acid binding | 1.93E-04 |
| 13 | GO:0044183: protein binding involved in protein folding | 3.13E-04 |
| 14 | GO:0004614: phosphoglucomutase activity | 3.78E-04 |
| 15 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 3.78E-04 |
| 16 | GO:0010291: carotene beta-ring hydroxylase activity | 3.78E-04 |
| 17 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.78E-04 |
| 18 | GO:0004618: phosphoglycerate kinase activity | 3.78E-04 |
| 19 | GO:0004047: aminomethyltransferase activity | 3.78E-04 |
| 20 | GO:0004312: fatty acid synthase activity | 3.78E-04 |
| 21 | GO:0000064: L-ornithine transmembrane transporter activity | 3.78E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 6.19E-04 |
| 23 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 6.19E-04 |
| 24 | GO:0003913: DNA photolyase activity | 6.19E-04 |
| 25 | GO:0008199: ferric iron binding | 8.83E-04 |
| 26 | GO:0001872: (1->3)-beta-D-glucan binding | 8.83E-04 |
| 27 | GO:0004322: ferroxidase activity | 8.83E-04 |
| 28 | GO:0008276: protein methyltransferase activity | 8.83E-04 |
| 29 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.83E-04 |
| 30 | GO:0048027: mRNA 5'-UTR binding | 8.83E-04 |
| 31 | GO:0047769: arogenate dehydratase activity | 1.17E-03 |
| 32 | GO:0004664: prephenate dehydratase activity | 1.17E-03 |
| 33 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.17E-03 |
| 34 | GO:0051082: unfolded protein binding | 1.27E-03 |
| 35 | GO:0045431: flavonol synthase activity | 1.48E-03 |
| 36 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.48E-03 |
| 37 | GO:0004784: superoxide dismutase activity | 1.83E-03 |
| 38 | GO:0102229: amylopectin maltohydrolase activity | 1.83E-03 |
| 39 | GO:0016462: pyrophosphatase activity | 1.83E-03 |
| 40 | GO:0080030: methyl indole-3-acetate esterase activity | 1.83E-03 |
| 41 | GO:0005200: structural constituent of cytoskeleton | 1.95E-03 |
| 42 | GO:0004672: protein kinase activity | 2.06E-03 |
| 43 | GO:0016161: beta-amylase activity | 2.19E-03 |
| 44 | GO:0004126: cytidine deaminase activity | 2.19E-03 |
| 45 | GO:0043295: glutathione binding | 2.58E-03 |
| 46 | GO:0004427: inorganic diphosphatase activity | 2.58E-03 |
| 47 | GO:0009881: photoreceptor activity | 2.58E-03 |
| 48 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.99E-03 |
| 49 | GO:0003843: 1,3-beta-D-glucan synthase activity | 3.41E-03 |
| 50 | GO:0046982: protein heterodimerization activity | 4.31E-03 |
| 51 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 5.32E-03 |
| 52 | GO:0008081: phosphoric diester hydrolase activity | 6.38E-03 |
| 53 | GO:0031072: heat shock protein binding | 6.38E-03 |
| 54 | GO:0004565: beta-galactosidase activity | 6.38E-03 |
| 55 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.58E-03 |
| 56 | GO:0004674: protein serine/threonine kinase activity | 7.96E-03 |
| 57 | GO:0031418: L-ascorbic acid binding | 8.70E-03 |
| 58 | GO:0005528: FK506 binding | 8.70E-03 |
| 59 | GO:0004707: MAP kinase activity | 9.97E-03 |
| 60 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.06E-02 |
| 61 | GO:0016757: transferase activity, transferring glycosyl groups | 1.07E-02 |
| 62 | GO:0016758: transferase activity, transferring hexosyl groups | 1.08E-02 |
| 63 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.14E-02 |
| 64 | GO:0003756: protein disulfide isomerase activity | 1.20E-02 |
| 65 | GO:0019901: protein kinase binding | 1.56E-02 |
| 66 | GO:0048038: quinone binding | 1.64E-02 |
| 67 | GO:0004518: nuclease activity | 1.72E-02 |
| 68 | GO:0008194: UDP-glycosyltransferase activity | 1.72E-02 |
| 69 | GO:0008483: transaminase activity | 1.96E-02 |
| 70 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.96E-02 |
| 71 | GO:0000287: magnesium ion binding | 2.33E-02 |
| 72 | GO:0030247: polysaccharide binding | 2.39E-02 |
| 73 | GO:0016788: hydrolase activity, acting on ester bonds | 2.42E-02 |
| 74 | GO:0016740: transferase activity | 2.53E-02 |
| 75 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.05E-02 |
| 76 | GO:0005507: copper ion binding | 3.06E-02 |
| 77 | GO:0052689: carboxylic ester hydrolase activity | 3.26E-02 |
| 78 | GO:0004364: glutathione transferase activity | 3.55E-02 |
| 79 | GO:0042803: protein homodimerization activity | 3.69E-02 |
| 80 | GO:0005198: structural molecule activity | 3.96E-02 |
| 81 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.07E-02 |
| 82 | GO:0016787: hydrolase activity | 4.20E-02 |
| 83 | GO:0005506: iron ion binding | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 2.34E-10 |
| 4 | GO:0009570: chloroplast stroma | 1.24E-09 |
| 5 | GO:0009941: chloroplast envelope | 7.22E-09 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 2.41E-04 |
| 7 | GO:0009579: thylakoid | 3.34E-04 |
| 8 | GO:0000786: nucleosome | 3.86E-04 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 4.22E-04 |
| 10 | GO:0030095: chloroplast photosystem II | 4.63E-04 |
| 11 | GO:0005886: plasma membrane | 5.87E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 7.02E-04 |
| 13 | GO:0005960: glycine cleavage complex | 8.83E-04 |
| 14 | GO:0000790: nuclear chromatin | 1.07E-03 |
| 15 | GO:0019898: extrinsic component of membrane | 1.42E-03 |
| 16 | GO:0055035: plastid thylakoid membrane | 1.48E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 1.49E-03 |
| 18 | GO:0010168: ER body | 1.83E-03 |
| 19 | GO:0000793: condensed chromosome | 1.83E-03 |
| 20 | GO:0010319: stromule | 1.95E-03 |
| 21 | GO:0009295: nucleoid | 1.95E-03 |
| 22 | GO:0031225: anchored component of membrane | 2.34E-03 |
| 23 | GO:0000148: 1,3-beta-D-glucan synthase complex | 3.41E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 3.86E-03 |
| 25 | GO:0045298: tubulin complex | 3.86E-03 |
| 26 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.86E-03 |
| 27 | GO:0016324: apical plasma membrane | 4.81E-03 |
| 28 | GO:0005856: cytoskeleton | 5.18E-03 |
| 29 | GO:0009508: plastid chromosome | 6.38E-03 |
| 30 | GO:0048046: apoplast | 1.22E-02 |
| 31 | GO:0000145: exocyst | 1.72E-02 |
| 32 | GO:0022626: cytosolic ribosome | 1.86E-02 |
| 33 | GO:0009536: plastid | 1.86E-02 |
| 34 | GO:0046658: anchored component of plasma membrane | 2.03E-02 |
| 35 | GO:0009707: chloroplast outer membrane | 2.57E-02 |
| 36 | GO:0009506: plasmodesma | 2.74E-02 |
| 37 | GO:0000325: plant-type vacuole | 2.85E-02 |
| 38 | GO:0031969: chloroplast membrane | 2.95E-02 |
| 39 | GO:0031977: thylakoid lumen | 3.44E-02 |
| 40 | GO:0005618: cell wall | 3.91E-02 |
| 41 | GO:0043231: intracellular membrane-bounded organelle | 4.77E-02 |