co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G27630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
2	GO:0005997: xylulose metabolic process	0.00E+00
3	GO:0010219: regulation of vernalization response	0.00E+00
4	GO:0010378: temperature compensation of the circadian clock	0.00E+00
5	GO:0007623: circadian rhythm	5.26E-06
6	GO:0009415: response to water	4.50E-05
7	GO:0032958: inositol phosphate biosynthetic process	8.61E-05
8	GO:0006369: termination of RNA polymerase II transcription	8.61E-05
9	GO:0042542: response to hydrogen peroxide	1.62E-04
10	GO:0030259: lipid glycosylation	2.04E-04
11	GO:0050688: regulation of defense response to virus	2.04E-04
12	GO:0010353: response to trehalose	2.04E-04
13	GO:0048833: specification of floral organ number	2.04E-04
14	GO:0051170: nuclear import	2.04E-04
15	GO:0035556: intracellular signal transduction	2.28E-04
16	GO:0016255: attachment of GPI anchor to protein	3.42E-04
17	GO:0030029: actin filament-based process	3.42E-04
18	GO:1901332: negative regulation of lateral root development	4.92E-04
19	GO:0006020: inositol metabolic process	4.92E-04
20	GO:0010601: positive regulation of auxin biosynthetic process	4.92E-04
21	GO:0006646: phosphatidylethanolamine biosynthetic process	6.55E-04
22	GO:0015743: malate transport	6.55E-04
23	GO:0048442: sepal development	6.55E-04
24	GO:0009737: response to abscisic acid	7.02E-04
25	GO:0048578: positive regulation of long-day photoperiodism, flowering	8.29E-04
26	GO:0009616: virus induced gene silencing	8.29E-04
27	GO:0016926: protein desumoylation	8.29E-04
28	GO:0043097: pyrimidine nucleoside salvage	8.29E-04
29	GO:0045040: protein import into mitochondrial outer membrane	1.01E-03
30	GO:0006206: pyrimidine nucleobase metabolic process	1.01E-03
31	GO:0009817: defense response to fungus, incompatible interaction	1.18E-03
32	GO:0045926: negative regulation of growth	1.20E-03
33	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.20E-03
34	GO:0071470: cellular response to osmotic stress	1.20E-03
35	GO:0000160: phosphorelay signal transduction system	1.23E-03
36	GO:0010218: response to far red light	1.29E-03
37	GO:0009631: cold acclimation	1.35E-03
38	GO:1900057: positive regulation of leaf senescence	1.41E-03
39	GO:0010038: response to metal ion	1.41E-03
40	GO:0009610: response to symbiotic fungus	1.41E-03
41	GO:0098869: cellular oxidant detoxification	1.41E-03
42	GO:0010050: vegetative phase change	1.41E-03
43	GO:0048437: floral organ development	1.41E-03
44	GO:0009637: response to blue light	1.48E-03
45	GO:0009819: drought recovery	1.63E-03
46	GO:0006506: GPI anchor biosynthetic process	1.63E-03
47	GO:0001510: RNA methylation	1.86E-03
48	GO:0010267: production of ta-siRNAs involved in RNA interference	2.35E-03
49	GO:0045892: negative regulation of transcription, DNA-templated	2.35E-03
50	GO:0005982: starch metabolic process	2.35E-03
51	GO:0006812: cation transport	2.37E-03
52	GO:0009970: cellular response to sulfate starvation	2.61E-03
53	GO:0006995: cellular response to nitrogen starvation	2.61E-03
54	GO:0048441: petal development	2.61E-03
55	GO:0051603: proteolysis involved in cellular protein catabolic process	2.62E-03
56	GO:0005983: starch catabolic process	3.15E-03
57	GO:0006626: protein targeting to mitochondrion	3.43E-03
58	GO:0009266: response to temperature stimulus	3.73E-03
59	GO:0048440: carpel development	3.73E-03
60	GO:0010025: wax biosynthetic process	4.34E-03
61	GO:0016575: histone deacetylation	4.98E-03
62	GO:0048511: rhythmic process	5.32E-03
63	GO:0009409: response to cold	5.44E-03
64	GO:0019748: secondary metabolic process	5.66E-03
65	GO:0010017: red or far-red light signaling pathway	5.66E-03
66	GO:0006355: regulation of transcription, DNA-templated	5.69E-03
67	GO:0009738: abscisic acid-activated signaling pathway	5.97E-03
68	GO:0010214: seed coat development	6.36E-03
69	GO:0048443: stamen development	6.36E-03
70	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.73E-03
71	GO:0080022: primary root development	7.10E-03
72	GO:0000226: microtubule cytoskeleton organization	7.10E-03
73	GO:0010468: regulation of gene expression	7.37E-03
74	GO:0045893: positive regulation of transcription, DNA-templated	7.41E-03
75	GO:0071472: cellular response to salt stress	7.48E-03
76	GO:0042752: regulation of circadian rhythm	7.87E-03
77	GO:0008654: phospholipid biosynthetic process	8.26E-03
78	GO:0009556: microsporogenesis	8.26E-03
79	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.66E-03
80	GO:0006511: ubiquitin-dependent protein catabolic process	9.18E-03
81	GO:0016125: sterol metabolic process	9.91E-03
82	GO:0006970: response to osmotic stress	1.03E-02
83	GO:0010286: heat acclimation	1.03E-02
84	GO:0007165: signal transduction	1.04E-02
85	GO:0051607: defense response to virus	1.08E-02
86	GO:0016126: sterol biosynthetic process	1.12E-02
87	GO:0009911: positive regulation of flower development	1.12E-02
88	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.17E-02
89	GO:0010029: regulation of seed germination	1.17E-02
90	GO:0080167: response to karrikin	1.19E-02
91	GO:0018298: protein-chromophore linkage	1.35E-02
92	GO:0009813: flavonoid biosynthetic process	1.40E-02
93	GO:0006811: ion transport	1.45E-02
94	GO:0009414: response to water deprivation	1.48E-02
95	GO:0016051: carbohydrate biosynthetic process	1.60E-02
96	GO:0009408: response to heat	1.76E-02
97	GO:0006351: transcription, DNA-templated	1.87E-02
98	GO:0010114: response to red light	1.92E-02
99	GO:0009640: photomorphogenesis	1.92E-02
100	GO:0000165: MAPK cascade	2.19E-02
101	GO:0009585: red, far-red light phototransduction	2.37E-02
102	GO:0009908: flower development	2.82E-02
103	GO:0009553: embryo sac development	2.98E-02
104	GO:0009058: biosynthetic process	3.71E-02
105	GO:0009845: seed germination	3.78E-02
106	GO:0042744: hydrogen peroxide catabolic process	3.92E-02
107	GO:0016036: cellular response to phosphate starvation	4.27E-02
108	GO:0006952: defense response	4.44E-02
109	GO:0010228: vegetative to reproductive phase transition of meristem	4.64E-02
110	GO:0016310: phosphorylation	4.66E-02
111	GO:0009739: response to gibberellin	4.86E-02
112	GO:0006470: protein dephosphorylation	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
2	GO:0005253: anion channel activity	6.94E-06
3	GO:0015562: efflux transmembrane transporter activity	1.77E-05
4	GO:0004856: xylulokinase activity	8.61E-05
5	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	8.61E-05
6	GO:0016906: sterol 3-beta-glucosyltransferase activity	8.61E-05
7	GO:0000829: inositol heptakisphosphate kinase activity	8.61E-05
8	GO:0102203: brassicasterol glucosyltransferase activity	8.61E-05
9	GO:0102202: soladodine glucosyltransferase activity	8.61E-05
10	GO:0050521: alpha-glucan, water dikinase activity	8.61E-05
11	GO:0000828: inositol hexakisphosphate kinase activity	8.61E-05
12	GO:0001047: core promoter binding	2.04E-04
13	GO:0004609: phosphatidylserine decarboxylase activity	2.04E-04
14	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.04E-04
15	GO:0004839: ubiquitin activating enzyme activity	2.04E-04
16	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.04E-04
17	GO:0008324: cation transmembrane transporter activity	2.91E-04
18	GO:0004096: catalase activity	3.42E-04
19	GO:0000156: phosphorelay response regulator activity	7.28E-04
20	GO:0016929: SUMO-specific protease activity	8.29E-04
21	GO:0008641: small protein activating enzyme activity	8.29E-04
22	GO:0016773: phosphotransferase activity, alcohol group as acceptor	8.29E-04
23	GO:0005247: voltage-gated chloride channel activity	1.01E-03
24	GO:2001070: starch binding	1.01E-03
25	GO:0004629: phospholipase C activity	1.01E-03
26	GO:0000293: ferric-chelate reductase activity	1.01E-03
27	GO:0004849: uridine kinase activity	1.20E-03
28	GO:0004435: phosphatidylinositol phospholipase C activity	1.20E-03
29	GO:0070300: phosphatidic acid binding	1.20E-03
30	GO:0009881: photoreceptor activity	1.41E-03
31	GO:0015140: malate transmembrane transporter activity	1.41E-03
32	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.86E-03
33	GO:0008308: voltage-gated anion channel activity	1.86E-03
34	GO:0001104: RNA polymerase II transcription cofactor activity	1.86E-03
35	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.10E-03
36	GO:0008234: cysteine-type peptidase activity	2.80E-03
37	GO:0004535: poly(A)-specific ribonuclease activity	3.73E-03
38	GO:0004175: endopeptidase activity	3.73E-03
39	GO:0004407: histone deacetylase activity	4.65E-03
40	GO:0004707: MAP kinase activity	5.32E-03
41	GO:0005515: protein binding	6.49E-03
42	GO:0004197: cysteine-type endopeptidase activity	9.07E-03
43	GO:0005200: structural constituent of cytoskeleton	1.03E-02
44	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.35E-02
45	GO:0050897: cobalt ion binding	1.50E-02
46	GO:0016301: kinase activity	1.51E-02
47	GO:0044212: transcription regulatory region DNA binding	1.52E-02
48	GO:0003824: catalytic activity	1.71E-02
49	GO:0004185: serine-type carboxypeptidase activity	1.92E-02
50	GO:0004842: ubiquitin-protein transferase activity	2.29E-02
51	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.73E-02
52	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.85E-02
53	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.85E-02
54	GO:0016758: transferase activity, transferring hexosyl groups	3.50E-02
55	GO:0043565: sequence-specific DNA binding	3.95E-02

Rank	GO Term	Adjusted P value
1	GO:0043036: starch grain	2.04E-04
2	GO:0042765: GPI-anchor transamidase complex	3.42E-04
3	GO:0070847: core mediator complex	1.01E-03
4	GO:0034707: chloride channel complex	1.01E-03
5	GO:0005655: nucleolar ribonuclease P complex	1.20E-03
6	GO:0034399: nuclear periphery	1.63E-03
7	GO:0005742: mitochondrial outer membrane translocase complex	1.86E-03
8	GO:0048471: perinuclear region of cytoplasm	2.87E-03
9	GO:0031307: integral component of mitochondrial outer membrane	3.15E-03
10	GO:0005764: lysosome	3.73E-03
11	GO:0005634: nucleus	5.03E-03
12	GO:0005741: mitochondrial outer membrane	5.32E-03
13	GO:0009705: plant-type vacuole membrane	6.18E-03
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.36E-03
15	GO:0016592: mediator complex	9.07E-03
16	GO:0005622: intracellular	1.29E-02
17	GO:0005829: cytosol	2.12E-02
18	GO:0031966: mitochondrial membrane	2.25E-02
19	GO:0016607: nuclear speck	2.73E-02
20	GO:0005654: nucleoplasm	3.50E-02
21	GO:0005777: peroxisome	3.58E-02
22	GO:0005623: cell	3.64E-02
23	GO:0005615: extracellular space	4.86E-02