GO Enrichment Analysis of Co-expressed Genes with
AT1G27480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 2 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.81E-07 |
| 6 | GO:0009658: chloroplast organization | 3.50E-07 |
| 7 | GO:0019253: reductive pentose-phosphate cycle | 2.41E-06 |
| 8 | GO:0009767: photosynthetic electron transport chain | 1.23E-04 |
| 9 | GO:0080183: response to photooxidative stress | 1.70E-04 |
| 10 | GO:0043039: tRNA aminoacylation | 1.70E-04 |
| 11 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.70E-04 |
| 12 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.70E-04 |
| 13 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.70E-04 |
| 14 | GO:0010338: leaf formation | 2.86E-04 |
| 15 | GO:0006696: ergosterol biosynthetic process | 2.86E-04 |
| 16 | GO:0016117: carotenoid biosynthetic process | 3.49E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.15E-04 |
| 18 | GO:0010239: chloroplast mRNA processing | 4.15E-04 |
| 19 | GO:0016556: mRNA modification | 4.15E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.15E-04 |
| 21 | GO:0033014: tetrapyrrole biosynthetic process | 4.15E-04 |
| 22 | GO:0043572: plastid fission | 4.15E-04 |
| 23 | GO:2001141: regulation of RNA biosynthetic process | 4.15E-04 |
| 24 | GO:0006479: protein methylation | 5.53E-04 |
| 25 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.53E-04 |
| 26 | GO:0045088: regulation of innate immune response | 5.53E-04 |
| 27 | GO:0009902: chloroplast relocation | 5.53E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 7.00E-04 |
| 29 | GO:0042026: protein refolding | 1.02E-03 |
| 30 | GO:1901259: chloroplast rRNA processing | 1.02E-03 |
| 31 | GO:0006458: 'de novo' protein folding | 1.02E-03 |
| 32 | GO:0046686: response to cadmium ion | 1.02E-03 |
| 33 | GO:0006826: iron ion transport | 1.19E-03 |
| 34 | GO:0048564: photosystem I assembly | 1.37E-03 |
| 35 | GO:0008610: lipid biosynthetic process | 1.37E-03 |
| 36 | GO:0071482: cellular response to light stimulus | 1.56E-03 |
| 37 | GO:0006783: heme biosynthetic process | 1.76E-03 |
| 38 | GO:0043067: regulation of programmed cell death | 1.97E-03 |
| 39 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.97E-03 |
| 40 | GO:0008356: asymmetric cell division | 1.97E-03 |
| 41 | GO:0006096: glycolytic process | 2.31E-03 |
| 42 | GO:0019684: photosynthesis, light reaction | 2.41E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 2.41E-03 |
| 44 | GO:0000272: polysaccharide catabolic process | 2.41E-03 |
| 45 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.41E-03 |
| 46 | GO:0008152: metabolic process | 2.44E-03 |
| 47 | GO:0045037: protein import into chloroplast stroma | 2.64E-03 |
| 48 | GO:0010020: chloroplast fission | 3.12E-03 |
| 49 | GO:0010039: response to iron ion | 3.37E-03 |
| 50 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.89E-03 |
| 51 | GO:0006810: transport | 4.12E-03 |
| 52 | GO:0006418: tRNA aminoacylation for protein translation | 4.17E-03 |
| 53 | GO:0007017: microtubule-based process | 4.17E-03 |
| 54 | GO:0061077: chaperone-mediated protein folding | 4.44E-03 |
| 55 | GO:0009416: response to light stimulus | 4.46E-03 |
| 56 | GO:0080092: regulation of pollen tube growth | 4.73E-03 |
| 57 | GO:0009741: response to brassinosteroid | 6.24E-03 |
| 58 | GO:0010197: polar nucleus fusion | 6.24E-03 |
| 59 | GO:0009646: response to absence of light | 6.56E-03 |
| 60 | GO:0032502: developmental process | 7.56E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 8.20E-03 |
| 62 | GO:0010286: heat acclimation | 8.61E-03 |
| 63 | GO:0009615: response to virus | 9.34E-03 |
| 64 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.44E-03 |
| 65 | GO:0015979: photosynthesis | 1.04E-02 |
| 66 | GO:0015995: chlorophyll biosynthetic process | 1.05E-02 |
| 67 | GO:0045454: cell redox homeostasis | 1.09E-02 |
| 68 | GO:0009817: defense response to fungus, incompatible interaction | 1.13E-02 |
| 69 | GO:0009407: toxin catabolic process | 1.21E-02 |
| 70 | GO:0009637: response to blue light | 1.33E-02 |
| 71 | GO:0009853: photorespiration | 1.33E-02 |
| 72 | GO:0006839: mitochondrial transport | 1.46E-02 |
| 73 | GO:0009744: response to sucrose | 1.59E-02 |
| 74 | GO:0009636: response to toxic substance | 1.73E-02 |
| 75 | GO:0009965: leaf morphogenesis | 1.73E-02 |
| 76 | GO:0042538: hyperosmotic salinity response | 1.87E-02 |
| 77 | GO:0009735: response to cytokinin | 2.20E-02 |
| 78 | GO:0009742: brassinosteroid mediated signaling pathway | 2.63E-02 |
| 79 | GO:0006457: protein folding | 3.11E-02 |
| 80 | GO:0009790: embryo development | 3.31E-02 |
| 81 | GO:0006413: translational initiation | 3.55E-02 |
| 82 | GO:0009451: RNA modification | 3.79E-02 |
| 83 | GO:0009739: response to gibberellin | 4.04E-02 |
| 84 | GO:0008380: RNA splicing | 4.23E-02 |
| 85 | GO:0042742: defense response to bacterium | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 5 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 6 | GO:0004618: phosphoglycerate kinase activity | 2.81E-07 |
| 7 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.83E-05 |
| 8 | GO:0004831: tyrosine-tRNA ligase activity | 7.07E-05 |
| 9 | GO:0004325: ferrochelatase activity | 7.07E-05 |
| 10 | GO:0051996: squalene synthase activity | 7.07E-05 |
| 11 | GO:0004817: cysteine-tRNA ligase activity | 1.70E-04 |
| 12 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.70E-04 |
| 13 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.86E-04 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 2.86E-04 |
| 15 | GO:0008276: protein methyltransferase activity | 4.15E-04 |
| 16 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.15E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 5.53E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.53E-04 |
| 19 | GO:0016987: sigma factor activity | 5.53E-04 |
| 20 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.00E-04 |
| 21 | GO:0080030: methyl indole-3-acetate esterase activity | 8.57E-04 |
| 22 | GO:0102229: amylopectin maltohydrolase activity | 8.57E-04 |
| 23 | GO:0051920: peroxiredoxin activity | 1.02E-03 |
| 24 | GO:0016161: beta-amylase activity | 1.02E-03 |
| 25 | GO:0043295: glutathione binding | 1.19E-03 |
| 26 | GO:0016209: antioxidant activity | 1.37E-03 |
| 27 | GO:0005198: structural molecule activity | 1.64E-03 |
| 28 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.39E-03 |
| 29 | GO:0044183: protein binding involved in protein folding | 2.41E-03 |
| 30 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.41E-03 |
| 31 | GO:0051082: unfolded protein binding | 2.78E-03 |
| 32 | GO:0031072: heat shock protein binding | 2.88E-03 |
| 33 | GO:0008194: UDP-glycosyltransferase activity | 5.33E-03 |
| 34 | GO:0004812: aminoacyl-tRNA ligase activity | 5.62E-03 |
| 35 | GO:0016740: transferase activity | 5.73E-03 |
| 36 | GO:0048038: quinone binding | 7.22E-03 |
| 37 | GO:0004601: peroxidase activity | 7.36E-03 |
| 38 | GO:0016597: amino acid binding | 8.97E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 1.21E-02 |
| 40 | GO:0050897: cobalt ion binding | 1.25E-02 |
| 41 | GO:0003746: translation elongation factor activity | 1.33E-02 |
| 42 | GO:0004519: endonuclease activity | 1.47E-02 |
| 43 | GO:0004364: glutathione transferase activity | 1.55E-02 |
| 44 | GO:0043621: protein self-association | 1.68E-02 |
| 45 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.97E-02 |
| 46 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.37E-02 |
| 47 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.37E-02 |
| 48 | GO:0022857: transmembrane transporter activity | 2.42E-02 |
| 49 | GO:0016787: hydrolase activity | 2.85E-02 |
| 50 | GO:0016758: transferase activity, transferring hexosyl groups | 2.91E-02 |
| 51 | GO:0019843: rRNA binding | 2.96E-02 |
| 52 | GO:0008565: protein transporter activity | 3.37E-02 |
| 53 | GO:0005507: copper ion binding | 3.42E-02 |
| 54 | GO:0005516: calmodulin binding | 3.61E-02 |
| 55 | GO:0005525: GTP binding | 3.94E-02 |
| 56 | GO:0003743: translation initiation factor activity | 4.16E-02 |
| 57 | GO:0042802: identical protein binding | 4.42E-02 |
| 58 | GO:0005509: calcium ion binding | 4.47E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.67E-23 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.56E-12 |
| 4 | GO:0009570: chloroplast stroma | 1.05E-11 |
| 5 | GO:0009941: chloroplast envelope | 2.95E-08 |
| 6 | GO:0009654: photosystem II oxygen evolving complex | 5.22E-06 |
| 7 | GO:0009579: thylakoid | 1.90E-05 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.89E-05 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.26E-05 |
| 10 | GO:0030095: chloroplast photosystem II | 1.41E-04 |
| 11 | GO:0031969: chloroplast membrane | 1.74E-04 |
| 12 | GO:0009706: chloroplast inner membrane | 2.93E-04 |
| 13 | GO:0005960: glycine cleavage complex | 4.15E-04 |
| 14 | GO:0019898: extrinsic component of membrane | 4.67E-04 |
| 15 | GO:0010319: stromule | 6.38E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 7.00E-04 |
| 17 | GO:0000793: condensed chromosome | 8.57E-04 |
| 18 | GO:0009534: chloroplast thylakoid | 1.05E-03 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 1.19E-03 |
| 20 | GO:0009539: photosystem II reaction center | 1.56E-03 |
| 21 | GO:0016324: apical plasma membrane | 2.19E-03 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 2.44E-03 |
| 23 | GO:0010287: plastoglobule | 3.28E-03 |
| 24 | GO:0005759: mitochondrial matrix | 4.34E-03 |
| 25 | GO:0009536: plastid | 1.41E-02 |
| 26 | GO:0031977: thylakoid lumen | 1.50E-02 |
| 27 | GO:0005747: mitochondrial respiratory chain complex I | 2.26E-02 |
| 28 | GO:0005623: cell | 3.02E-02 |
| 29 | GO:0031225: anchored component of membrane | 3.74E-02 |