Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G27360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010336: gibberellic acid homeostasis0.00E+00
2GO:0000024: maltose biosynthetic process0.00E+00
3GO:0018316: peptide cross-linking via L-cystine0.00E+00
4GO:0035725: sodium ion transmembrane transport0.00E+00
5GO:0009946: proximal/distal axis specification0.00E+00
6GO:0009264: deoxyribonucleotide catabolic process0.00E+00
7GO:0015822: ornithine transport0.00E+00
8GO:0006559: L-phenylalanine catabolic process1.38E-05
9GO:1901349: glucosinolate transport7.39E-05
10GO:0090449: phloem glucosinolate loading7.39E-05
11GO:0003002: regionalization7.39E-05
12GO:0006659: phosphatidylserine biosynthetic process7.39E-05
13GO:0019605: butyrate metabolic process7.39E-05
14GO:0071454: cellular response to anoxia7.39E-05
15GO:0006083: acetate metabolic process7.39E-05
16GO:0000066: mitochondrial ornithine transport7.39E-05
17GO:0051555: flavonol biosynthetic process8.25E-05
18GO:0019253: reductive pentose-phosphate cycle1.50E-04
19GO:0019388: galactose catabolic process1.77E-04
20GO:0080153: negative regulation of reductive pentose-phosphate cycle1.77E-04
21GO:0010351: lithium ion transport2.99E-04
22GO:0006651: diacylglycerol biosynthetic process2.99E-04
23GO:0010338: leaf formation2.99E-04
24GO:0009753: response to jasmonic acid4.06E-04
25GO:0008152: metabolic process4.24E-04
26GO:0006520: cellular amino acid metabolic process4.31E-04
27GO:0009963: positive regulation of flavonoid biosynthetic process4.32E-04
28GO:0009052: pentose-phosphate shunt, non-oxidative branch4.32E-04
29GO:0009590: detection of gravity4.32E-04
30GO:0006572: tyrosine catabolic process4.32E-04
31GO:0006021: inositol biosynthetic process5.75E-04
32GO:0019464: glycine decarboxylation via glycine cleavage system5.75E-04
33GO:0009765: photosynthesis, light harvesting5.75E-04
34GO:0045088: regulation of innate immune response5.75E-04
35GO:0098719: sodium ion import across plasma membrane7.29E-04
36GO:0010236: plastoquinone biosynthetic process7.29E-04
37GO:0006097: glyoxylate cycle7.29E-04
38GO:0006796: phosphate-containing compound metabolic process8.91E-04
39GO:0009643: photosynthetic acclimation8.91E-04
40GO:0010304: PSII associated light-harvesting complex II catabolic process8.91E-04
41GO:0010264: myo-inositol hexakisphosphate biosynthetic process8.91E-04
42GO:0070814: hydrogen sulfide biosynthetic process8.91E-04
43GO:0009611: response to wounding9.02E-04
44GO:0009813: flavonoid biosynthetic process1.02E-03
45GO:0017148: negative regulation of translation1.06E-03
46GO:0010218: response to far red light1.07E-03
47GO:0006955: immune response1.24E-03
48GO:0008610: lipid biosynthetic process1.43E-03
49GO:0005978: glycogen biosynthetic process1.43E-03
50GO:0010439: regulation of glucosinolate biosynthetic process1.43E-03
51GO:0055075: potassium ion homeostasis1.43E-03
52GO:0080167: response to karrikin1.43E-03
53GO:0009744: response to sucrose1.56E-03
54GO:0048193: Golgi vesicle transport1.63E-03
55GO:0090333: regulation of stomatal closure1.83E-03
56GO:0010018: far-red light signaling pathway2.05E-03
57GO:0008356: asymmetric cell division2.05E-03
58GO:0051453: regulation of intracellular pH2.05E-03
59GO:0006857: oligopeptide transport2.23E-03
60GO:0009970: cellular response to sulfate starvation2.28E-03
61GO:0000103: sulfate assimilation2.28E-03
62GO:0009909: regulation of flower development2.30E-03
63GO:0019684: photosynthesis, light reaction2.51E-03
64GO:0000272: polysaccharide catabolic process2.51E-03
65GO:0048229: gametophyte development2.51E-03
66GO:0005983: starch catabolic process2.75E-03
67GO:0006006: glucose metabolic process3.00E-03
68GO:0009767: photosynthetic electron transport chain3.00E-03
69GO:0034605: cellular response to heat3.25E-03
70GO:0010020: chloroplast fission3.25E-03
71GO:0010223: secondary shoot formation3.25E-03
72GO:0009934: regulation of meristem structural organization3.25E-03
73GO:0042343: indole glucosinolate metabolic process3.51E-03
74GO:0009944: polarity specification of adaxial/abaxial axis4.06E-03
75GO:0009768: photosynthesis, light harvesting in photosystem I4.34E-03
76GO:0006366: transcription from RNA polymerase II promoter4.63E-03
77GO:0098542: defense response to other organism4.63E-03
78GO:0019915: lipid storage4.63E-03
79GO:0009416: response to light stimulus4.81E-03
80GO:0007623: circadian rhythm5.06E-03
81GO:0009625: response to insect5.23E-03
82GO:0009739: response to gibberellin5.66E-03
83GO:0070417: cellular response to cold5.86E-03
84GO:0016117: carotenoid biosynthetic process5.86E-03
85GO:0042335: cuticle development6.18E-03
86GO:0006342: chromatin silencing6.51E-03
87GO:0006814: sodium ion transport6.84E-03
88GO:0009791: post-embryonic development7.19E-03
89GO:0019252: starch biosynthetic process7.19E-03
90GO:0008654: phospholipid biosynthetic process7.19E-03
91GO:0016125: sterol metabolic process8.61E-03
92GO:0010286: heat acclimation8.98E-03
93GO:0071805: potassium ion transmembrane transport8.98E-03
94GO:0009615: response to virus9.74E-03
95GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.00E-02
96GO:0042128: nitrate assimilation1.05E-02
97GO:0048573: photoperiodism, flowering1.09E-02
98GO:0018298: protein-chromophore linkage1.17E-02
99GO:0009407: toxin catabolic process1.26E-02
100GO:0010119: regulation of stomatal movement1.30E-02
101GO:0009733: response to auxin1.37E-02
102GO:0045087: innate immune response1.39E-02
103GO:0009637: response to blue light1.39E-02
104GO:0009853: photorespiration1.39E-02
105GO:0009751: response to salicylic acid1.42E-02
106GO:0006629: lipid metabolic process1.44E-02
107GO:0006839: mitochondrial transport1.52E-02
108GO:0006631: fatty acid metabolic process1.57E-02
109GO:0010114: response to red light1.66E-02
110GO:0009926: auxin polar transport1.66E-02
111GO:0009636: response to toxic substance1.80E-02
112GO:0009965: leaf morphogenesis1.80E-02
113GO:0006810: transport1.92E-02
114GO:0009908: flower development2.31E-02
115GO:0009735: response to cytokinin2.33E-02
116GO:0018105: peptidyl-serine phosphorylation2.69E-02
117GO:0009058: biosynthetic process3.21E-02
118GO:0009845: seed germination3.27E-02
119GO:0006470: protein dephosphorylation4.28E-02
120GO:0006508: proteolysis4.79E-02
RankGO TermAdjusted P value
1GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
2GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
3GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
4GO:1990055: phenylacetaldehyde synthase activity0.00E+00
5GO:0102229: amylopectin maltohydrolase activity1.38E-05
6GO:0016161: beta-amylase activity1.97E-05
7GO:0010313: phytochrome binding7.39E-05
8GO:0047760: butyrate-CoA ligase activity7.39E-05
9GO:0090448: glucosinolate:proton symporter activity7.39E-05
10GO:0004837: tyrosine decarboxylase activity7.39E-05
11GO:0045486: naringenin 3-dioxygenase activity7.39E-05
12GO:0003987: acetate-CoA ligase activity7.39E-05
13GO:0008194: UDP-glycosyltransferase activity7.43E-05
14GO:0000064: L-ornithine transmembrane transporter activity1.77E-04
15GO:0004512: inositol-3-phosphate synthase activity1.77E-04
16GO:0004614: phosphoglucomutase activity1.77E-04
17GO:0016868: intramolecular transferase activity, phosphotransferases1.77E-04
18GO:0080043: quercetin 3-O-glucosyltransferase activity2.82E-04
19GO:0080044: quercetin 7-O-glucosyltransferase activity2.82E-04
20GO:0008253: 5'-nucleotidase activity2.99E-04
21GO:0004751: ribose-5-phosphate isomerase activity2.99E-04
22GO:0030267: glyoxylate reductase (NADP) activity2.99E-04
23GO:0004383: guanylate cyclase activity2.99E-04
24GO:0004781: sulfate adenylyltransferase (ATP) activity2.99E-04
25GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity2.99E-04
26GO:0001653: peptide receptor activity4.32E-04
27GO:0048027: mRNA 5'-UTR binding4.32E-04
28GO:0004375: glycine dehydrogenase (decarboxylating) activity4.32E-04
29GO:0045430: chalcone isomerase activity5.75E-04
30GO:0045431: flavonol synthase activity7.29E-04
31GO:0016208: AMP binding8.91E-04
32GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity8.91E-04
33GO:0015081: sodium ion transmembrane transporter activity8.91E-04
34GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.06E-03
35GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.06E-03
36GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.06E-03
37GO:0008195: phosphatidate phosphatase activity1.06E-03
38GO:0016757: transferase activity, transferring glycosyl groups1.17E-03
39GO:0004427: inorganic diphosphatase activity1.24E-03
40GO:0043295: glutathione binding1.24E-03
41GO:0102425: myricetin 3-O-glucosyltransferase activity1.24E-03
42GO:0102360: daphnetin 3-O-glucosyltransferase activity1.24E-03
43GO:0047893: flavonol 3-O-glucosyltransferase activity1.43E-03
44GO:0004714: transmembrane receptor protein tyrosine kinase activity1.43E-03
45GO:0015386: potassium:proton antiporter activity2.51E-03
46GO:0008327: methyl-CpG binding2.51E-03
47GO:0047372: acylglycerol lipase activity2.51E-03
48GO:0008081: phosphoric diester hydrolase activity3.00E-03
49GO:0004175: endopeptidase activity3.25E-03
50GO:0031409: pigment binding3.78E-03
51GO:0001046: core promoter sequence-specific DNA binding4.06E-03
52GO:0031418: L-ascorbic acid binding4.06E-03
53GO:0030170: pyridoxal phosphate binding4.08E-03
54GO:0035251: UDP-glucosyltransferase activity4.63E-03
55GO:0004176: ATP-dependent peptidase activity4.63E-03
56GO:0046982: protein heterodimerization activity7.68E-03
57GO:0000287: magnesium ion binding7.68E-03
58GO:0004518: nuclease activity7.89E-03
59GO:0015385: sodium:proton antiporter activity8.25E-03
60GO:0008237: metallopeptidase activity8.98E-03
61GO:0016597: amino acid binding9.36E-03
62GO:0016168: chlorophyll binding1.01E-02
63GO:0009931: calcium-dependent protein serine/threonine kinase activity1.05E-02
64GO:0004683: calmodulin-dependent protein kinase activity1.09E-02
65GO:0008236: serine-type peptidase activity1.13E-02
66GO:0004222: metalloendopeptidase activity1.26E-02
67GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.30E-02
68GO:0004364: glutathione transferase activity1.61E-02
69GO:0004185: serine-type carboxypeptidase activity1.66E-02
70GO:0005198: structural molecule activity1.80E-02
71GO:0051287: NAD binding1.90E-02
72GO:0020037: heme binding2.10E-02
73GO:0004650: polygalacturonase activity2.47E-02
74GO:0043565: sequence-specific DNA binding2.95E-02
75GO:0016758: transferase activity, transferring hexosyl groups3.04E-02
76GO:0005515: protein binding3.09E-02
77GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.16E-02
78GO:0016829: lyase activity3.27E-02
79GO:0003677: DNA binding3.32E-02
80GO:0019825: oxygen binding3.63E-02
81GO:0005516: calmodulin binding3.83E-02
82GO:0005509: calcium ion binding4.74E-02
83GO:0046872: metal ion binding4.82E-02
RankGO TermAdjusted P value
1GO:0097708: intracellular vesicle0.00E+00
2GO:0009941: chloroplast envelope2.69E-05
3GO:0009344: nitrite reductase complex [NAD(P)H]7.39E-05
4GO:0009507: chloroplast2.60E-04
5GO:0009570: chloroplast stroma3.61E-04
6GO:0005960: glycine cleavage complex4.32E-04
7GO:0010319: stromule6.76E-04
8GO:0000793: condensed chromosome8.91E-04
9GO:0009535: chloroplast thylakoid membrane2.14E-03
10GO:0043231: intracellular membrane-bounded organelle2.64E-03
11GO:0030095: chloroplast photosystem II3.25E-03
12GO:0005764: lysosome3.25E-03
13GO:0030076: light-harvesting complex3.51E-03
14GO:0043234: protein complex3.78E-03
15GO:0009654: photosystem II oxygen evolving complex4.34E-03
16GO:0000790: nuclear chromatin5.86E-03
17GO:0009579: thylakoid6.04E-03
18GO:0009522: photosystem I6.84E-03
19GO:0009523: photosystem II7.19E-03
20GO:0019898: extrinsic component of membrane7.19E-03
21GO:0009707: chloroplast outer membrane1.17E-02
22GO:0000325: plant-type vacuole1.30E-02
23GO:0005743: mitochondrial inner membrane1.33E-02
24GO:0000786: nucleosome1.34E-02
25GO:0009536: plastid1.53E-02
26GO:0010287: plastoglobule2.98E-02
27GO:0009534: chloroplast thylakoid3.08E-02
28GO:0009543: chloroplast thylakoid lumen3.10E-02
29GO:0009506: plasmodesma4.50E-02
Gene type



Gene DE type