Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G27120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905499: trichome papilla formation0.00E+00
2GO:0033494: ferulate metabolic process0.00E+00
3GO:0090470: shoot organ boundary specification0.00E+00
4GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
5GO:0007638: mechanosensory behavior0.00E+00
6GO:0042335: cuticle development3.36E-07
7GO:0009773: photosynthetic electron transport in photosystem I5.49E-07
8GO:0010025: wax biosynthetic process2.36E-06
9GO:0071555: cell wall organization1.46E-05
10GO:0016042: lipid catabolic process4.88E-05
11GO:0010037: response to carbon dioxide5.05E-05
12GO:0015976: carbon utilization5.05E-05
13GO:0006183: GTP biosynthetic process5.05E-05
14GO:2000122: negative regulation of stomatal complex development5.05E-05
15GO:0006869: lipid transport2.41E-04
16GO:0006810: transport2.63E-04
17GO:0033481: galacturonate biosynthetic process2.75E-04
18GO:0042371: vitamin K biosynthetic process2.75E-04
19GO:1902458: positive regulation of stomatal opening2.75E-04
20GO:0071588: hydrogen peroxide mediated signaling pathway2.75E-04
21GO:0010729: positive regulation of hydrogen peroxide biosynthetic process2.75E-04
22GO:0051180: vitamin transport2.75E-04
23GO:0030974: thiamine pyrophosphate transport2.75E-04
24GO:0010442: guard cell morphogenesis2.75E-04
25GO:0046520: sphingoid biosynthetic process2.75E-04
26GO:0071277: cellular response to calcium ion2.75E-04
27GO:1903426: regulation of reactive oxygen species biosynthetic process6.04E-04
28GO:0030388: fructose 1,6-bisphosphate metabolic process6.04E-04
29GO:0052541: plant-type cell wall cellulose metabolic process6.04E-04
30GO:0010115: regulation of abscisic acid biosynthetic process6.04E-04
31GO:0015786: UDP-glucose transport6.04E-04
32GO:0015893: drug transport6.04E-04
33GO:0060919: auxin influx6.04E-04
34GO:0097054: L-glutamate biosynthetic process6.04E-04
35GO:0000038: very long-chain fatty acid metabolic process6.30E-04
36GO:0010411: xyloglucan metabolic process6.55E-04
37GO:0009725: response to hormone8.15E-04
38GO:0009735: response to cytokinin8.37E-04
39GO:0015979: photosynthesis8.83E-04
40GO:0010143: cutin biosynthetic process9.17E-04
41GO:0010207: photosystem II assembly9.17E-04
42GO:0015783: GDP-fucose transport9.79E-04
43GO:0090506: axillary shoot meristem initiation9.79E-04
44GO:0015714: phosphoenolpyruvate transport9.79E-04
45GO:0006000: fructose metabolic process9.79E-04
46GO:0006633: fatty acid biosynthetic process1.04E-03
47GO:0009744: response to sucrose1.37E-03
48GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.40E-03
49GO:0010371: regulation of gibberellin biosynthetic process1.40E-03
50GO:0006166: purine ribonucleoside salvage1.40E-03
51GO:0007231: osmosensory signaling pathway1.40E-03
52GO:0006537: glutamate biosynthetic process1.40E-03
53GO:0006241: CTP biosynthetic process1.40E-03
54GO:0072334: UDP-galactose transmembrane transport1.40E-03
55GO:0006165: nucleoside diphosphate phosphorylation1.40E-03
56GO:0006168: adenine salvage1.40E-03
57GO:0006228: UTP biosynthetic process1.40E-03
58GO:0042546: cell wall biogenesis1.44E-03
59GO:0019676: ammonia assimilation cycle1.87E-03
60GO:0009765: photosynthesis, light harvesting1.87E-03
61GO:0045727: positive regulation of translation1.87E-03
62GO:0033500: carbohydrate homeostasis1.87E-03
63GO:0031122: cytoplasmic microtubule organization1.87E-03
64GO:0015713: phosphoglycerate transport1.87E-03
65GO:0016123: xanthophyll biosynthetic process2.39E-03
66GO:0044209: AMP salvage2.39E-03
67GO:0006665: sphingolipid metabolic process2.39E-03
68GO:0006564: L-serine biosynthetic process2.39E-03
69GO:0016120: carotene biosynthetic process2.39E-03
70GO:0010236: plastoquinone biosynthetic process2.39E-03
71GO:0006656: phosphatidylcholine biosynthetic process2.39E-03
72GO:0045038: protein import into chloroplast thylakoid membrane2.39E-03
73GO:0010182: sugar mediated signaling pathway2.48E-03
74GO:0006561: proline biosynthetic process2.95E-03
75GO:0009913: epidermal cell differentiation2.95E-03
76GO:0006086: acetyl-CoA biosynthetic process from pyruvate2.95E-03
77GO:0035435: phosphate ion transmembrane transport2.95E-03
78GO:0055114: oxidation-reduction process3.17E-03
79GO:0010019: chloroplast-nucleus signaling pathway3.55E-03
80GO:0042372: phylloquinone biosynthetic process3.55E-03
81GO:0010067: procambium histogenesis3.55E-03
82GO:0006694: steroid biosynthetic process3.55E-03
83GO:0010189: vitamin E biosynthetic process3.55E-03
84GO:0009395: phospholipid catabolic process4.19E-03
85GO:0010444: guard mother cell differentiation4.19E-03
86GO:0050829: defense response to Gram-negative bacterium4.19E-03
87GO:0031540: regulation of anthocyanin biosynthetic process4.86E-03
88GO:0055075: potassium ion homeostasis4.86E-03
89GO:0016559: peroxisome fission4.86E-03
90GO:0007155: cell adhesion4.86E-03
91GO:0030091: protein repair4.86E-03
92GO:0008610: lipid biosynthetic process4.86E-03
93GO:0009704: de-etiolation4.86E-03
94GO:2000070: regulation of response to water deprivation4.86E-03
95GO:0009808: lignin metabolic process5.57E-03
96GO:0006002: fructose 6-phosphate metabolic process5.57E-03
97GO:0015996: chlorophyll catabolic process5.57E-03
98GO:0007186: G-protein coupled receptor signaling pathway5.57E-03
99GO:0032544: plastid translation5.57E-03
100GO:0018298: protein-chromophore linkage5.76E-03
101GO:0010311: lateral root formation6.05E-03
102GO:0045490: pectin catabolic process6.29E-03
103GO:0007623: circadian rhythm6.29E-03
104GO:0090305: nucleic acid phosphodiester bond hydrolysis6.31E-03
105GO:0034765: regulation of ion transmembrane transport6.31E-03
106GO:0090333: regulation of stomatal closure6.31E-03
107GO:0010119: regulation of stomatal movement6.66E-03
108GO:0010205: photoinhibition7.09E-03
109GO:0042761: very long-chain fatty acid biosynthetic process7.09E-03
110GO:0009409: response to cold7.27E-03
111GO:0048829: root cap development7.90E-03
112GO:0019538: protein metabolic process7.90E-03
113GO:0009688: abscisic acid biosynthetic process7.90E-03
114GO:0006839: mitochondrial transport8.33E-03
115GO:0006816: calcium ion transport8.74E-03
116GO:0008285: negative regulation of cell proliferation8.74E-03
117GO:0009750: response to fructose8.74E-03
118GO:0009640: photomorphogenesis9.42E-03
119GO:0006820: anion transport9.61E-03
120GO:0015706: nitrate transport9.61E-03
121GO:0045037: protein import into chloroplast stroma9.61E-03
122GO:0008643: carbohydrate transport1.02E-02
123GO:0010229: inflorescence development1.05E-02
124GO:0006094: gluconeogenesis1.05E-02
125GO:0005986: sucrose biosynthetic process1.05E-02
126GO:0048467: gynoecium development1.14E-02
127GO:0010020: chloroplast fission1.14E-02
128GO:0019253: reductive pentose-phosphate cycle1.14E-02
129GO:0010223: secondary shoot formation1.14E-02
130GO:0009225: nucleotide-sugar metabolic process1.24E-02
131GO:0010167: response to nitrate1.24E-02
132GO:0005985: sucrose metabolic process1.24E-02
133GO:0070588: calcium ion transmembrane transport1.24E-02
134GO:0009833: plant-type primary cell wall biogenesis1.34E-02
135GO:0006071: glycerol metabolic process1.34E-02
136GO:0019762: glucosinolate catabolic process1.34E-02
137GO:0006636: unsaturated fatty acid biosynthetic process1.34E-02
138GO:0042023: DNA endoreduplication1.34E-02
139GO:0006857: oligopeptide transport1.36E-02
140GO:0009416: response to light stimulus1.39E-02
141GO:0006487: protein N-linked glycosylation1.44E-02
142GO:0000027: ribosomal large subunit assembly1.44E-02
143GO:0007010: cytoskeleton organization1.44E-02
144GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.51E-02
145GO:0010073: meristem maintenance1.55E-02
146GO:0010026: trichome differentiation1.55E-02
147GO:0009768: photosynthesis, light harvesting in photosystem I1.55E-02
148GO:0061077: chaperone-mediated protein folding1.65E-02
149GO:0031408: oxylipin biosynthetic process1.65E-02
150GO:0003333: amino acid transmembrane transport1.65E-02
151GO:0016998: cell wall macromolecule catabolic process1.65E-02
152GO:0030245: cellulose catabolic process1.76E-02
153GO:0016226: iron-sulfur cluster assembly1.76E-02
154GO:0042545: cell wall modification1.76E-02
155GO:0045454: cell redox homeostasis1.81E-02
156GO:0001944: vasculature development1.88E-02
157GO:0010227: floral organ abscission1.88E-02
158GO:0009294: DNA mediated transformation1.88E-02
159GO:0010089: xylem development1.99E-02
160GO:0010091: trichome branching1.99E-02
161GO:0042127: regulation of cell proliferation1.99E-02
162GO:0019722: calcium-mediated signaling1.99E-02
163GO:0055085: transmembrane transport1.99E-02
164GO:0016117: carotenoid biosynthetic process2.11E-02
165GO:0010087: phloem or xylem histogenesis2.23E-02
166GO:0042391: regulation of membrane potential2.23E-02
167GO:0000413: protein peptidyl-prolyl isomerization2.23E-02
168GO:0016132: brassinosteroid biosynthetic process2.73E-02
169GO:0000302: response to reactive oxygen species2.73E-02
170GO:0002229: defense response to oomycetes2.73E-02
171GO:0007264: small GTPase mediated signal transduction2.86E-02
172GO:1901657: glycosyl compound metabolic process2.99E-02
173GO:0010252: auxin homeostasis3.13E-02
174GO:0010150: leaf senescence3.14E-02
175GO:0071805: potassium ion transmembrane transport3.27E-02
176GO:0007267: cell-cell signaling3.27E-02
177GO:0016126: sterol biosynthetic process3.55E-02
178GO:0010027: thylakoid membrane organization3.55E-02
179GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.69E-02
180GO:0009627: systemic acquired resistance3.84E-02
181GO:0042128: nitrate assimilation3.84E-02
182GO:0042742: defense response to bacterium3.95E-02
183GO:0009817: defense response to fungus, incompatible interaction4.29E-02
184GO:0000160: phosphorelay signal transduction system4.44E-02
185GO:0009834: plant-type secondary cell wall biogenesis4.59E-02
186GO:0009407: toxin catabolic process4.59E-02
187GO:0010218: response to far red light4.59E-02
188GO:0009826: unidimensional cell growth4.66E-02
189GO:0009631: cold acclimation4.75E-02
190GO:0009658: chloroplast organization4.84E-02
191GO:0006865: amino acid transport4.91E-02
192GO:0042254: ribosome biogenesis4.93E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0050614: delta24-sterol reductase activity0.00E+00
4GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
5GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
6GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
7GO:0010301: xanthoxin dehydrogenase activity0.00E+00
8GO:0045435: lycopene epsilon cyclase activity0.00E+00
9GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
10GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
11GO:0052689: carboxylic ester hydrolase activity1.18E-08
12GO:0016788: hydrolase activity, acting on ester bonds4.79E-08
13GO:0051920: peroxiredoxin activity2.59E-06
14GO:0016209: antioxidant activity6.33E-06
15GO:0051753: mannan synthase activity1.60E-04
16GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity2.75E-04
17GO:0000170: sphingosine hydroxylase activity2.75E-04
18GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.75E-04
19GO:0004560: alpha-L-fucosidase activity2.75E-04
20GO:0090422: thiamine pyrophosphate transporter activity2.75E-04
21GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.75E-04
22GO:0008568: microtubule-severing ATPase activity2.75E-04
23GO:0015121: phosphoenolpyruvate:phosphate antiporter activity2.75E-04
24GO:0031957: very long-chain fatty acid-CoA ligase activity2.75E-04
25GO:0016041: glutamate synthase (ferredoxin) activity2.75E-04
26GO:0016762: xyloglucan:xyloglucosyl transferase activity3.29E-04
27GO:0004617: phosphoglycerate dehydrogenase activity6.04E-04
28GO:0003938: IMP dehydrogenase activity6.04E-04
29GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.04E-04
30GO:0042284: sphingolipid delta-4 desaturase activity6.04E-04
31GO:0000234: phosphoethanolamine N-methyltransferase activity6.04E-04
32GO:0008967: phosphoglycolate phosphatase activity6.04E-04
33GO:0016798: hydrolase activity, acting on glycosyl bonds6.55E-04
34GO:0004089: carbonate dehydratase activity8.15E-04
35GO:0005457: GDP-fucose transmembrane transporter activity9.79E-04
36GO:0050734: hydroxycinnamoyltransferase activity9.79E-04
37GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.14E-03
38GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.14E-03
39GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.14E-03
40GO:0005528: FK506 binding1.26E-03
41GO:0003999: adenine phosphoribosyltransferase activity1.40E-03
42GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity1.40E-03
43GO:0005460: UDP-glucose transmembrane transporter activity1.40E-03
44GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.40E-03
45GO:0004550: nucleoside diphosphate kinase activity1.40E-03
46GO:0015293: symporter activity1.59E-03
47GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.67E-03
48GO:0015120: phosphoglycerate transmembrane transporter activity1.87E-03
49GO:0004659: prenyltransferase activity1.87E-03
50GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.87E-03
51GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.87E-03
52GO:0010328: auxin influx transmembrane transporter activity1.87E-03
53GO:0052793: pectin acetylesterase activity1.87E-03
54GO:0050378: UDP-glucuronate 4-epimerase activity1.87E-03
55GO:0004506: squalene monooxygenase activity1.87E-03
56GO:0008381: mechanically-gated ion channel activity2.39E-03
57GO:0009922: fatty acid elongase activity2.39E-03
58GO:0005459: UDP-galactose transmembrane transporter activity2.39E-03
59GO:0004040: amidase activity2.39E-03
60GO:0051538: 3 iron, 4 sulfur cluster binding2.39E-03
61GO:0008289: lipid binding2.47E-03
62GO:0004872: receptor activity2.86E-03
63GO:0030599: pectinesterase activity2.90E-03
64GO:0016208: AMP binding2.95E-03
65GO:0004130: cytochrome-c peroxidase activity2.95E-03
66GO:0016688: L-ascorbate peroxidase activity2.95E-03
67GO:0005242: inward rectifier potassium channel activity3.55E-03
68GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.55E-03
69GO:0102391: decanoate--CoA ligase activity3.55E-03
70GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.55E-03
71GO:0004467: long-chain fatty acid-CoA ligase activity4.19E-03
72GO:0016168: chlorophyll binding4.67E-03
73GO:0052747: sinapyl alcohol dehydrogenase activity4.86E-03
74GO:0005215: transporter activity4.89E-03
75GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.57E-03
76GO:0015297: antiporter activity5.92E-03
77GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.16E-03
78GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors6.31E-03
79GO:0008889: glycerophosphodiester phosphodiesterase activity6.31E-03
80GO:0015112: nitrate transmembrane transporter activity7.09E-03
81GO:0005516: calmodulin binding7.74E-03
82GO:0030234: enzyme regulator activity7.90E-03
83GO:0047372: acylglycerol lipase activity8.74E-03
84GO:0015386: potassium:proton antiporter activity8.74E-03
85GO:0045551: cinnamyl-alcohol dehydrogenase activity9.61E-03
86GO:0005262: calcium channel activity1.05E-02
87GO:0015114: phosphate ion transmembrane transporter activity1.05E-02
88GO:0004565: beta-galactosidase activity1.05E-02
89GO:0004022: alcohol dehydrogenase (NAD) activity1.05E-02
90GO:0004601: peroxidase activity1.10E-02
91GO:0008266: poly(U) RNA binding1.14E-02
92GO:0031409: pigment binding1.34E-02
93GO:0045330: aspartyl esterase activity1.41E-02
94GO:0051536: iron-sulfur cluster binding1.44E-02
95GO:0004857: enzyme inhibitor activity1.44E-02
96GO:0003824: catalytic activity1.52E-02
97GO:0015079: potassium ion transmembrane transporter activity1.55E-02
98GO:0033612: receptor serine/threonine kinase binding1.65E-02
99GO:0022857: transmembrane transporter activity1.71E-02
100GO:0022891: substrate-specific transmembrane transporter activity1.88E-02
101GO:0030570: pectate lyase activity1.88E-02
102GO:0008810: cellulase activity1.88E-02
103GO:0008514: organic anion transmembrane transporter activity1.99E-02
104GO:0016491: oxidoreductase activity2.08E-02
105GO:0005102: receptor binding2.11E-02
106GO:0005249: voltage-gated potassium channel activity2.23E-02
107GO:0030551: cyclic nucleotide binding2.23E-02
108GO:0019843: rRNA binding2.28E-02
109GO:0050662: coenzyme binding2.47E-02
110GO:0048038: quinone binding2.73E-02
111GO:0004518: nuclease activity2.86E-02
112GO:0000156: phosphorelay response regulator activity2.99E-02
113GO:0016759: cellulose synthase activity3.13E-02
114GO:0016722: oxidoreductase activity, oxidizing metal ions3.27E-02
115GO:0008017: microtubule binding3.29E-02
116GO:0016597: amino acid binding3.41E-02
117GO:0008375: acetylglucosaminyltransferase activity3.84E-02
118GO:0009931: calcium-dependent protein serine/threonine kinase activity3.84E-02
119GO:0004683: calmodulin-dependent protein kinase activity3.99E-02
120GO:0042802: identical protein binding3.99E-02
121GO:0102483: scopolin beta-glucosidase activity3.99E-02
122GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.14E-02
123GO:0015238: drug transmembrane transporter activity4.44E-02
124GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.59E-02
125GO:0030145: manganese ion binding4.75E-02
126GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.75E-02
RankGO TermAdjusted P value
1GO:0010240: plastid pyruvate dehydrogenase complex0.00E+00
2GO:0048046: apoplast9.68E-16
3GO:0009535: chloroplast thylakoid membrane9.74E-11
4GO:0009507: chloroplast3.07E-10
5GO:0009941: chloroplast envelope1.78E-07
6GO:0010319: stromule1.50E-06
7GO:0009579: thylakoid1.55E-06
8GO:0046658: anchored component of plasma membrane5.06E-06
9GO:0009543: chloroplast thylakoid lumen1.01E-05
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.28E-05
11GO:0009534: chloroplast thylakoid1.30E-05
12GO:0009570: chloroplast stroma3.15E-05
13GO:0031225: anchored component of membrane3.31E-05
14GO:0031969: chloroplast membrane1.30E-04
15GO:0016021: integral component of membrane1.95E-04
16GO:0005576: extracellular region2.09E-04
17GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex2.75E-04
18GO:0009923: fatty acid elongase complex2.75E-04
19GO:0005886: plasma membrane4.37E-04
20GO:0005618: cell wall4.89E-04
21GO:0009505: plant-type cell wall6.05E-04
22GO:0009528: plastid inner membrane9.79E-04
23GO:0009527: plastid outer membrane1.87E-03
24GO:0016020: membrane2.02E-03
25GO:0010287: plastoglobule3.89E-03
26GO:0009533: chloroplast stromal thylakoid4.19E-03
27GO:0009707: chloroplast outer membrane5.76E-03
28GO:0030095: chloroplast photosystem II1.14E-02
29GO:0030076: light-harvesting complex1.24E-02
30GO:0005875: microtubule associated complex1.34E-02
31GO:0005758: mitochondrial intermembrane space1.44E-02
32GO:0005783: endoplasmic reticulum1.48E-02
33GO:0009654: photosystem II oxygen evolving complex1.55E-02
34GO:0042651: thylakoid membrane1.55E-02
35GO:0009532: plastid stroma1.65E-02
36GO:0005777: peroxisome1.71E-02
37GO:0009706: chloroplast inner membrane1.82E-02
38GO:0009522: photosystem I2.47E-02
39GO:0009523: photosystem II2.60E-02
40GO:0019898: extrinsic component of membrane2.60E-02
41GO:0005789: endoplasmic reticulum membrane2.67E-02
42GO:0032580: Golgi cisterna membrane3.13E-02
43GO:0005778: peroxisomal membrane3.27E-02
44GO:0005615: extracellular space3.51E-02
Gene type



Gene DE type