co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G26920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:2000505: regulation of energy homeostasis	0.00E+00
3	GO:0046620: regulation of organ growth	2.33E-09
4	GO:0080170: hydrogen peroxide transmembrane transport	4.63E-06
5	GO:0034220: ion transmembrane transport	2.64E-05
6	GO:0009416: response to light stimulus	3.93E-05
7	GO:0006106: fumarate metabolic process	9.88E-05
8	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	9.88E-05
9	GO:0010205: photoinhibition	1.06E-04
10	GO:0009638: phototropism	1.06E-04
11	GO:0009773: photosynthetic electron transport in photosystem I	1.48E-04
12	GO:0009926: auxin polar transport	2.22E-04
13	GO:0010207: photosystem II assembly	2.25E-04
14	GO:0043255: regulation of carbohydrate biosynthetic process	2.32E-04
15	GO:0010115: regulation of abscisic acid biosynthetic process	2.32E-04
16	GO:0010167: response to nitrate	2.54E-04
17	GO:0009733: response to auxin	2.77E-04
18	GO:0006636: unsaturated fatty acid biosynthetic process	2.84E-04
19	GO:0006833: water transport	2.84E-04
20	GO:0006857: oligopeptide transport	3.62E-04
21	GO:0015714: phosphoenolpyruvate transport	3.86E-04
22	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.54E-04
23	GO:0009800: cinnamic acid biosynthetic process	5.54E-04
24	GO:0009651: response to salt stress	6.99E-04
25	GO:0010109: regulation of photosynthesis	7.37E-04
26	GO:0015713: phosphoglycerate transport	7.37E-04
27	GO:0030104: water homeostasis	7.37E-04
28	GO:0006633: fatty acid biosynthetic process	9.16E-04
29	GO:0006561: proline biosynthetic process	1.14E-03
30	GO:0006751: glutathione catabolic process	1.14E-03
31	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.14E-03
32	GO:0006559: L-phenylalanine catabolic process	1.14E-03
33	GO:0009913: epidermal cell differentiation	1.14E-03
34	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.14E-03
35	GO:0010337: regulation of salicylic acid metabolic process	1.14E-03
36	GO:0042128: nitrate assimilation	1.21E-03
37	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.36E-03
38	GO:0010444: guard mother cell differentiation	1.59E-03
39	GO:1900056: negative regulation of leaf senescence	1.59E-03
40	GO:1900057: positive regulation of leaf senescence	1.59E-03
41	GO:0006605: protein targeting	1.84E-03
42	GO:0055075: potassium ion homeostasis	1.84E-03
43	GO:0008610: lipid biosynthetic process	1.84E-03
44	GO:0009642: response to light intensity	1.84E-03
45	GO:0006810: transport	2.02E-03
46	GO:0055085: transmembrane transport	2.24E-03
47	GO:0006032: chitin catabolic process	2.95E-03
48	GO:0009688: abscisic acid biosynthetic process	2.95E-03
49	GO:0009750: response to fructose	3.25E-03
50	GO:0000038: very long-chain fatty acid metabolic process	3.25E-03
51	GO:0015706: nitrate transport	3.57E-03
52	GO:0010628: positive regulation of gene expression	3.89E-03
53	GO:0006108: malate metabolic process	3.89E-03
54	GO:0010588: cotyledon vascular tissue pattern formation	3.89E-03
55	GO:0009785: blue light signaling pathway	3.89E-03
56	GO:0009414: response to water deprivation	4.39E-03
57	GO:0051726: regulation of cell cycle	4.56E-03
58	GO:0071732: cellular response to nitric oxide	4.57E-03
59	GO:0010030: positive regulation of seed germination	4.57E-03
60	GO:0010053: root epidermal cell differentiation	4.57E-03
61	GO:0009825: multidimensional cell growth	4.57E-03
62	GO:0010025: wax biosynthetic process	4.92E-03
63	GO:0006825: copper ion transport	5.65E-03
64	GO:0008299: isoprenoid biosynthetic process	5.65E-03
65	GO:0007017: microtubule-based process	5.65E-03
66	GO:0009734: auxin-activated signaling pathway	5.86E-03
67	GO:0016998: cell wall macromolecule catabolic process	6.03E-03
68	GO:0048511: rhythmic process	6.03E-03
69	GO:0019915: lipid storage	6.03E-03
70	GO:0031408: oxylipin biosynthetic process	6.03E-03
71	GO:0071369: cellular response to ethylene stimulus	6.82E-03
72	GO:0042127: regulation of cell proliferation	7.23E-03
73	GO:0009306: protein secretion	7.23E-03
74	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.64E-03
75	GO:0000271: polysaccharide biosynthetic process	8.07E-03
76	GO:0080022: primary root development	8.07E-03
77	GO:0010087: phloem or xylem histogenesis	8.07E-03
78	GO:0042631: cellular response to water deprivation	8.07E-03
79	GO:0042335: cuticle development	8.07E-03
80	GO:0010182: sugar mediated signaling pathway	8.50E-03
81	GO:0045489: pectin biosynthetic process	8.50E-03
82	GO:0010305: leaf vascular tissue pattern formation	8.50E-03
83	GO:0042752: regulation of circadian rhythm	8.94E-03
84	GO:0071281: cellular response to iron ion	1.08E-02
85	GO:0010027: thylakoid membrane organization	1.28E-02
86	GO:0007049: cell cycle	1.29E-02
87	GO:0007165: signal transduction	1.38E-02
88	GO:0080167: response to karrikin	1.43E-02
89	GO:0009737: response to abscisic acid	1.43E-02
90	GO:0018298: protein-chromophore linkage	1.54E-02
91	GO:0030244: cellulose biosynthetic process	1.54E-02
92	GO:0006811: ion transport	1.65E-02
93	GO:0009631: cold acclimation	1.71E-02
94	GO:0016051: carbohydrate biosynthetic process	1.82E-02
95	GO:0006099: tricarboxylic acid cycle	1.88E-02
96	GO:0006869: lipid transport	1.88E-02
97	GO:0071555: cell wall organization	1.92E-02
98	GO:0030001: metal ion transport	2.00E-02
99	GO:0016042: lipid catabolic process	2.05E-02
100	GO:0009408: response to heat	2.11E-02
101	GO:0009644: response to high light intensity	2.31E-02
102	GO:0016567: protein ubiquitination	2.43E-02
103	GO:0009809: lignin biosynthetic process	2.70E-02
104	GO:0009585: red, far-red light phototransduction	2.70E-02
105	GO:0009409: response to cold	2.81E-02
106	GO:0006096: glycolytic process	3.04E-02
107	GO:0048367: shoot system development	3.11E-02
108	GO:0048316: seed development	3.11E-02
109	GO:0055114: oxidation-reduction process	3.40E-02
110	GO:0009624: response to nematode	3.47E-02
111	GO:0009611: response to wounding	3.83E-02
112	GO:0051301: cell division	4.08E-02
113	GO:0007275: multicellular organism development	4.46E-02
114	GO:0006413: translational initiation	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
2	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
3	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
4	GO:0004871: signal transducer activity	6.55E-05
5	GO:0015250: water channel activity	7.43E-05
6	GO:0004333: fumarate hydratase activity	9.88E-05
7	GO:0030794: (S)-coclaurine-N-methyltransferase activity	9.88E-05
8	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	9.88E-05
9	GO:0045485: omega-6 fatty acid desaturase activity	9.88E-05
10	GO:0003839: gamma-glutamylcyclotransferase activity	2.32E-04
11	GO:0005528: FK506 binding	3.16E-04
12	GO:0070402: NADPH binding	3.86E-04
13	GO:0045548: phenylalanine ammonia-lyase activity	3.86E-04
14	GO:0001872: (1->3)-beta-D-glucan binding	5.54E-04
15	GO:0015120: phosphoglycerate transmembrane transporter activity	7.37E-04
16	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	7.37E-04
17	GO:0052793: pectin acetylesterase activity	7.37E-04
18	GO:0004629: phospholipase C activity	1.14E-03
19	GO:0000293: ferric-chelate reductase activity	1.14E-03
20	GO:0035673: oligopeptide transmembrane transporter activity	1.14E-03
21	GO:0030247: polysaccharide binding	1.27E-03
22	GO:0004435: phosphatidylinositol phospholipase C activity	1.36E-03
23	GO:0004017: adenylate kinase activity	1.36E-03
24	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.54E-03
25	GO:0016491: oxidoreductase activity	1.67E-03
26	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.10E-03
27	GO:0015293: symporter activity	2.54E-03
28	GO:0052689: carboxylic ester hydrolase activity	2.63E-03
29	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.64E-03
30	GO:0015112: nitrate transmembrane transporter activity	2.65E-03
31	GO:0004568: chitinase activity	2.95E-03
32	GO:0008794: arsenate reductase (glutaredoxin) activity	3.25E-03
33	GO:0015198: oligopeptide transporter activity	3.57E-03
34	GO:0004022: alcohol dehydrogenase (NAD) activity	3.89E-03
35	GO:0004565: beta-galactosidase activity	3.89E-03
36	GO:0008081: phosphoric diester hydrolase activity	3.89E-03
37	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.92E-03
38	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.92E-03
39	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.92E-03
40	GO:0005215: transporter activity	5.30E-03
41	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.42E-03
42	GO:0022891: substrate-specific transmembrane transporter activity	6.82E-03
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.92E-03
44	GO:0016853: isomerase activity	8.94E-03
45	GO:0019901: protein kinase binding	9.39E-03
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.44E-03
47	GO:0016791: phosphatase activity	1.13E-02
48	GO:0016788: hydrolase activity, acting on ester bonds	1.17E-02
49	GO:0005200: structural constituent of cytoskeleton	1.18E-02
50	GO:0008483: transaminase activity	1.18E-02
51	GO:0016168: chlorophyll binding	1.33E-02
52	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.54E-02
53	GO:0030145: manganese ion binding	1.71E-02
54	GO:0009055: electron carrier activity	2.27E-02
55	GO:0051537: 2 iron, 2 sulfur cluster binding	2.31E-02
56	GO:0003690: double-stranded DNA binding	2.77E-02
57	GO:0031625: ubiquitin protein ligase binding	2.90E-02
58	GO:0022857: transmembrane transporter activity	3.32E-02
59	GO:0015035: protein disulfide oxidoreductase activity	3.54E-02
60	GO:0016746: transferase activity, transferring acyl groups	3.54E-02
61	GO:0016758: transferase activity, transferring hexosyl groups	3.99E-02
62	GO:0015297: antiporter activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0009507: chloroplast	4.72E-05
3	GO:0009535: chloroplast thylakoid membrane	5.33E-05
4	GO:0005886: plasma membrane	7.72E-05
5	GO:0045239: tricarboxylic acid cycle enzyme complex	9.88E-05
6	GO:0043674: columella	9.88E-05
7	GO:0030093: chloroplast photosystem I	2.32E-04
8	GO:0009941: chloroplast envelope	4.25E-04
9	GO:0015630: microtubule cytoskeleton	5.54E-04
10	GO:0009543: chloroplast thylakoid lumen	6.91E-04
11	GO:0005887: integral component of plasma membrane	1.04E-03
12	GO:0042807: central vacuole	1.59E-03
13	GO:0031969: chloroplast membrane	2.32E-03
14	GO:0008180: COP9 signalosome	2.37E-03
15	GO:0009508: plastid chromosome	3.89E-03
16	GO:0009706: chloroplast inner membrane	4.31E-03
17	GO:0009523: photosystem II	9.39E-03
18	GO:0009579: thylakoid	9.87E-03
19	GO:0009534: chloroplast thylakoid	1.00E-02
20	GO:0009295: nucleoid	1.18E-02
21	GO:0019005: SCF ubiquitin ligase complex	1.54E-02
22	GO:0000151: ubiquitin ligase complex	1.54E-02
23	GO:0016021: integral component of membrane	1.96E-02
24	GO:0031977: thylakoid lumen	2.06E-02
25	GO:0016020: membrane	2.68E-02
26	GO:0009570: chloroplast stroma	2.69E-02
27	GO:0000502: proteasome complex	2.70E-02