co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G25275

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:0043269: regulation of ion transport	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0006884: cell volume homeostasis	0.00E+00
6	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
7	GO:0010398: xylogalacturonan metabolic process	0.00E+00
8	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
9	GO:0009617: response to bacterium	4.88E-13
10	GO:0000162: tryptophan biosynthetic process	1.13E-07
11	GO:0010120: camalexin biosynthetic process	2.43E-07
12	GO:0071456: cellular response to hypoxia	3.51E-07
13	GO:0055114: oxidation-reduction process	3.75E-07
14	GO:0009682: induced systemic resistance	1.24E-06
15	GO:0009626: plant-type hypersensitive response	1.06E-05
16	GO:0006468: protein phosphorylation	1.24E-05
17	GO:0010112: regulation of systemic acquired resistance	2.33E-05
18	GO:0052544: defense response by callose deposition in cell wall	5.13E-05
19	GO:0042742: defense response to bacterium	6.10E-05
20	GO:0009759: indole glucosinolate biosynthetic process	1.74E-04
21	GO:1903648: positive regulation of chlorophyll catabolic process	3.52E-04
22	GO:0051245: negative regulation of cellular defense response	3.52E-04
23	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.52E-04
24	GO:0009700: indole phytoalexin biosynthetic process	3.52E-04
25	GO:1901183: positive regulation of camalexin biosynthetic process	3.52E-04
26	GO:0042759: long-chain fatty acid biosynthetic process	3.52E-04
27	GO:0010150: leaf senescence	4.20E-04
28	GO:0009851: auxin biosynthetic process	4.83E-04
29	GO:0007166: cell surface receptor signaling pathway	5.36E-04
30	GO:0010252: auxin homeostasis	6.73E-04
31	GO:0018022: peptidyl-lysine methylation	7.67E-04
32	GO:0044419: interspecies interaction between organisms	7.67E-04
33	GO:0051258: protein polymerization	7.67E-04
34	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.67E-04
35	GO:0007154: cell communication	7.67E-04
36	GO:0019441: tryptophan catabolic process to kynurenine	7.67E-04
37	GO:0097054: L-glutamate biosynthetic process	7.67E-04
38	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.77E-04
39	GO:0043069: negative regulation of programmed cell death	7.77E-04
40	GO:0046686: response to cadmium ion	8.46E-04
41	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.24E-03
42	GO:0048281: inflorescence morphogenesis	1.24E-03
43	GO:0080055: low-affinity nitrate transport	1.24E-03
44	GO:0002237: response to molecule of bacterial origin	1.30E-03
45	GO:0042343: indole glucosinolate metabolic process	1.45E-03
46	GO:0050832: defense response to fungus	1.70E-03
47	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.79E-03
48	GO:0019438: aromatic compound biosynthetic process	1.79E-03
49	GO:0048194: Golgi vesicle budding	1.79E-03
50	GO:0006537: glutamate biosynthetic process	1.79E-03
51	GO:0009399: nitrogen fixation	1.79E-03
52	GO:0006612: protein targeting to membrane	1.79E-03
53	GO:0046513: ceramide biosynthetic process	1.79E-03
54	GO:0051707: response to other organism	2.18E-03
55	GO:0016998: cell wall macromolecule catabolic process	2.18E-03
56	GO:1901141: regulation of lignin biosynthetic process	2.40E-03
57	GO:0019676: ammonia assimilation cycle	2.40E-03
58	GO:0010483: pollen tube reception	2.40E-03
59	GO:1902584: positive regulation of response to water deprivation	2.40E-03
60	GO:0010363: regulation of plant-type hypersensitive response	2.40E-03
61	GO:0010600: regulation of auxin biosynthetic process	2.40E-03
62	GO:0010107: potassium ion import	2.40E-03
63	GO:0080142: regulation of salicylic acid biosynthetic process	2.40E-03
64	GO:0032259: methylation	2.45E-03
65	GO:0009625: response to insect	2.60E-03
66	GO:0007029: endoplasmic reticulum organization	3.07E-03
67	GO:0000304: response to singlet oxygen	3.07E-03
68	GO:0034052: positive regulation of plant-type hypersensitive response	3.07E-03
69	GO:0009697: salicylic acid biosynthetic process	3.07E-03
70	GO:0042391: regulation of membrane potential	3.31E-03
71	GO:0009267: cellular response to starvation	3.79E-03
72	GO:0009117: nucleotide metabolic process	3.79E-03
73	GO:0002238: response to molecule of fungal origin	3.79E-03
74	GO:0006561: proline biosynthetic process	3.79E-03
75	GO:0010942: positive regulation of cell death	3.79E-03
76	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.57E-03
77	GO:0006694: steroid biosynthetic process	4.57E-03
78	GO:0010583: response to cyclopentenone	4.70E-03
79	GO:1900056: negative regulation of leaf senescence	5.40E-03
80	GO:0006821: chloride transport	5.40E-03
81	GO:1900057: positive regulation of leaf senescence	5.40E-03
82	GO:1902074: response to salt	5.40E-03
83	GO:0009061: anaerobic respiration	6.27E-03
84	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.27E-03
85	GO:0009819: drought recovery	6.27E-03
86	GO:0030091: protein repair	6.27E-03
87	GO:0001666: response to hypoxia	6.37E-03
88	GO:0009816: defense response to bacterium, incompatible interaction	6.74E-03
89	GO:0043562: cellular response to nitrogen levels	7.19E-03
90	GO:0009808: lignin metabolic process	7.19E-03
91	GO:0009699: phenylpropanoid biosynthetic process	7.19E-03
92	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	7.19E-03
93	GO:0010204: defense response signaling pathway, resistance gene-independent	7.19E-03
94	GO:0007338: single fertilization	8.16E-03
95	GO:0009821: alkaloid biosynthetic process	8.16E-03
96	GO:0034765: regulation of ion transmembrane transport	8.16E-03
97	GO:0090333: regulation of stomatal closure	8.16E-03
98	GO:0009817: defense response to fungus, incompatible interaction	8.33E-03
99	GO:0008219: cell death	8.33E-03
100	GO:0010311: lateral root formation	8.75E-03
101	GO:0000387: spliceosomal snRNP assembly	9.17E-03
102	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	9.17E-03
103	GO:0008202: steroid metabolic process	9.17E-03
104	GO:0009407: toxin catabolic process	9.19E-03
105	GO:0010043: response to zinc ion	9.64E-03
106	GO:0007064: mitotic sister chromatid cohesion	1.02E-02
107	GO:0006535: cysteine biosynthetic process from serine	1.02E-02
108	GO:0006032: chitin catabolic process	1.02E-02
109	GO:0009688: abscisic acid biosynthetic process	1.02E-02
110	GO:0048829: root cap development	1.02E-02
111	GO:0009733: response to auxin	1.04E-02
112	GO:0030148: sphingolipid biosynthetic process	1.13E-02
113	GO:0009089: lysine biosynthetic process via diaminopimelate	1.13E-02
114	GO:0000272: polysaccharide catabolic process	1.13E-02
115	GO:0048229: gametophyte development	1.13E-02
116	GO:0000266: mitochondrial fission	1.25E-02
117	GO:0012501: programmed cell death	1.25E-02
118	GO:0002213: defense response to insect	1.25E-02
119	GO:0015706: nitrate transport	1.25E-02
120	GO:0006631: fatty acid metabolic process	1.26E-02
121	GO:0055046: microgametogenesis	1.37E-02
122	GO:0009718: anthocyanin-containing compound biosynthetic process	1.37E-02
123	GO:0009737: response to abscisic acid	1.38E-02
124	GO:0010143: cutin biosynthetic process	1.49E-02
125	GO:0006541: glutamine metabolic process	1.49E-02
126	GO:0009636: response to toxic substance	1.54E-02
127	GO:0010053: root epidermal cell differentiation	1.61E-02
128	GO:0010167: response to nitrate	1.61E-02
129	GO:0070588: calcium ion transmembrane transport	1.61E-02
130	GO:0010025: wax biosynthetic process	1.74E-02
131	GO:0006813: potassium ion transport	1.85E-02
132	GO:0005992: trehalose biosynthetic process	1.88E-02
133	GO:0019344: cysteine biosynthetic process	1.88E-02
134	GO:0009863: salicylic acid mediated signaling pathway	1.88E-02
135	GO:0080147: root hair cell development	1.88E-02
136	GO:2000377: regulation of reactive oxygen species metabolic process	1.88E-02
137	GO:0006952: defense response	2.09E-02
138	GO:0048278: vesicle docking	2.15E-02
139	GO:0031408: oxylipin biosynthetic process	2.15E-02
140	GO:0009814: defense response, incompatible interaction	2.29E-02
141	GO:0016226: iron-sulfur cluster assembly	2.29E-02
142	GO:0009620: response to fungus	2.40E-02
143	GO:0010227: floral organ abscission	2.44E-02
144	GO:0006012: galactose metabolic process	2.44E-02
145	GO:0071215: cellular response to abscisic acid stimulus	2.44E-02
146	GO:0006979: response to oxidative stress	2.47E-02
147	GO:0044550: secondary metabolite biosynthetic process	2.55E-02
148	GO:0010584: pollen exine formation	2.59E-02
149	GO:0009561: megagametogenesis	2.59E-02
150	GO:0070417: cellular response to cold	2.74E-02
151	GO:0045489: pectin biosynthetic process	3.06E-02
152	GO:0008360: regulation of cell shape	3.06E-02
153	GO:0006885: regulation of pH	3.06E-02
154	GO:0006662: glycerol ether metabolic process	3.06E-02
155	GO:0061025: membrane fusion	3.22E-02
156	GO:0042752: regulation of circadian rhythm	3.22E-02
157	GO:0009646: response to absence of light	3.22E-02
158	GO:0048544: recognition of pollen	3.22E-02
159	GO:0009749: response to glucose	3.39E-02
160	GO:0008654: phospholipid biosynthetic process	3.39E-02
161	GO:0009651: response to salt stress	3.51E-02
162	GO:0002229: defense response to oomycetes	3.55E-02
163	GO:0000302: response to reactive oxygen species	3.55E-02
164	GO:0009751: response to salicylic acid	3.67E-02
165	GO:0009630: gravitropism	3.72E-02
166	GO:1901657: glycosyl compound metabolic process	3.90E-02
167	GO:0009567: double fertilization forming a zygote and endosperm	4.07E-02
168	GO:0019760: glucosinolate metabolic process	4.07E-02
169	GO:0006914: autophagy	4.07E-02
170	GO:0006633: fatty acid biosynthetic process	4.13E-02
171	GO:0051607: defense response to virus	4.43E-02
172	GO:0016310: phosphorylation	4.51E-02
173	GO:0009627: systemic acquired resistance	4.99E-02
174	GO:0042128: nitrate assimilation	4.99E-02
175	GO:0006906: vesicle fusion	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0004168: dolichol kinase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0015930: glutamate synthase activity	0.00E+00
6	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	0.00E+00
7	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
8	GO:0010279: indole-3-acetic acid amido synthetase activity	6.54E-07
9	GO:0004674: protein serine/threonine kinase activity	1.32E-05
10	GO:0016301: kinase activity	1.39E-05
11	GO:0004049: anthranilate synthase activity	1.97E-05
12	GO:0004834: tryptophan synthase activity	7.72E-05
13	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.87E-04
14	GO:0102391: decanoate--CoA ligase activity	2.36E-04
15	GO:0050660: flavin adenine dinucleotide binding	2.55E-04
16	GO:0004467: long-chain fatty acid-CoA ligase activity	3.06E-04
17	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.52E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.52E-04
19	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.52E-04
20	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.52E-04
21	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.52E-04
22	GO:0016041: glutamate synthase (ferredoxin) activity	3.52E-04
23	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.52E-04
24	GO:0005524: ATP binding	4.80E-04
25	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	5.09E-04
26	GO:0009055: electron carrier activity	7.66E-04
27	GO:0050291: sphingosine N-acyltransferase activity	7.67E-04
28	GO:0004750: ribulose-phosphate 3-epimerase activity	7.67E-04
29	GO:0032934: sterol binding	7.67E-04
30	GO:0045140: inositol phosphoceramide synthase activity	7.67E-04
31	GO:0004061: arylformamidase activity	7.67E-04
32	GO:0004385: guanylate kinase activity	7.67E-04
33	GO:0008171: O-methyltransferase activity	7.77E-04
34	GO:0004713: protein tyrosine kinase activity	7.77E-04
35	GO:0005506: iron ion binding	8.29E-04
36	GO:0051213: dioxygenase activity	8.42E-04
37	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.10E-03
38	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.24E-03
39	GO:0004324: ferredoxin-NADP+ reductase activity	1.24E-03
40	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	1.24E-03
41	GO:0000975: regulatory region DNA binding	1.24E-03
42	GO:0004383: guanylate cyclase activity	1.24E-03
43	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.58E-03
44	GO:0016491: oxidoreductase activity	1.66E-03
45	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.79E-03
46	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.79E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.88E-03
48	GO:0005216: ion channel activity	1.98E-03
49	GO:0004364: glutathione transferase activity	2.07E-03
50	GO:0016279: protein-lysine N-methyltransferase activity	2.40E-03
51	GO:0043015: gamma-tubulin binding	2.40E-03
52	GO:0004031: aldehyde oxidase activity	2.40E-03
53	GO:0050302: indole-3-acetaldehyde oxidase activity	2.40E-03
54	GO:0004356: glutamate-ammonia ligase activity	3.07E-03
55	GO:0045431: flavonol synthase activity	3.07E-03
56	GO:0051538: 3 iron, 4 sulfur cluster binding	3.07E-03
57	GO:0030551: cyclic nucleotide binding	3.31E-03
58	GO:0004605: phosphatidate cytidylyltransferase activity	3.79E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.79E-03
60	GO:0035252: UDP-xylosyltransferase activity	3.79E-03
61	GO:0008168: methyltransferase activity	3.85E-03
62	GO:0019825: oxygen binding	4.17E-03
63	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.57E-03
64	GO:0005242: inward rectifier potassium channel activity	4.57E-03
65	GO:0004124: cysteine synthase activity	4.57E-03
66	GO:0051920: peroxiredoxin activity	4.57E-03
67	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.57E-03
68	GO:0004012: phospholipid-translocating ATPase activity	4.57E-03
69	GO:0004656: procollagen-proline 4-dioxygenase activity	4.57E-03
70	GO:0005516: calmodulin binding	4.64E-03
71	GO:0016746: transferase activity, transferring acyl groups	5.19E-03
72	GO:0102425: myricetin 3-O-glucosyltransferase activity	5.40E-03
73	GO:0102360: daphnetin 3-O-glucosyltransferase activity	5.40E-03
74	GO:0043295: glutathione binding	5.40E-03
75	GO:0004620: phospholipase activity	5.40E-03
76	GO:0016209: antioxidant activity	6.27E-03
77	GO:0004034: aldose 1-epimerase activity	6.27E-03
78	GO:0047893: flavonol 3-O-glucosyltransferase activity	6.27E-03
79	GO:0004033: aldo-keto reductase (NADP) activity	6.27E-03
80	GO:0008142: oxysterol binding	7.19E-03
81	GO:0003843: 1,3-beta-D-glucan synthase activity	7.19E-03
82	GO:0030247: polysaccharide binding	7.51E-03
83	GO:0071949: FAD binding	8.16E-03
84	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	9.17E-03
85	GO:0004743: pyruvate kinase activity	9.17E-03
86	GO:0030955: potassium ion binding	9.17E-03
87	GO:0004568: chitinase activity	1.02E-02
88	GO:0008559: xenobiotic-transporting ATPase activity	1.13E-02
89	GO:0047372: acylglycerol lipase activity	1.13E-02
90	GO:0005507: copper ion binding	1.34E-02
91	GO:0005388: calcium-transporting ATPase activity	1.37E-02
92	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.37E-02
93	GO:0004022: alcohol dehydrogenase (NAD) activity	1.37E-02
94	GO:0030552: cAMP binding	1.61E-02
95	GO:0030553: cGMP binding	1.61E-02
96	GO:0008061: chitin binding	1.61E-02
97	GO:0051536: iron-sulfur cluster binding	1.88E-02
98	GO:0031418: L-ascorbic acid binding	1.88E-02
99	GO:0043130: ubiquitin binding	1.88E-02
100	GO:0020037: heme binding	2.00E-02
101	GO:0035251: UDP-glucosyltransferase activity	2.15E-02
102	GO:0045735: nutrient reservoir activity	2.18E-02
103	GO:0004497: monooxygenase activity	2.30E-02
104	GO:0061630: ubiquitin protein ligase activity	2.45E-02
105	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.59E-02
106	GO:0015035: protein disulfide oxidoreductase activity	2.71E-02
107	GO:0047134: protein-disulfide reductase activity	2.74E-02
108	GO:0005249: voltage-gated potassium channel activity	2.90E-02
109	GO:0005451: monovalent cation:proton antiporter activity	2.90E-02
110	GO:0003713: transcription coactivator activity	3.06E-02
111	GO:0004791: thioredoxin-disulfide reductase activity	3.22E-02
112	GO:0016853: isomerase activity	3.22E-02
113	GO:0015299: solute:proton antiporter activity	3.22E-02
114	GO:0004872: receptor activity	3.39E-02
115	GO:0030170: pyridoxal phosphate binding	3.65E-02
116	GO:0015385: sodium:proton antiporter activity	3.90E-02
117	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.90E-02
118	GO:0008483: transaminase activity	4.25E-02
119	GO:0004672: protein kinase activity	4.59E-02
120	GO:0008017: microtubule binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0034709: methylosome	0.00E+00
2	GO:0005886: plasma membrane	3.18E-07
3	GO:0005829: cytosol	2.22E-04
4	GO:0045252: oxoglutarate dehydrogenase complex	3.52E-04
5	GO:0016021: integral component of membrane	4.90E-04
6	GO:0005783: endoplasmic reticulum	6.10E-04
7	GO:0005950: anthranilate synthase complex	7.67E-04
8	GO:0034715: pICln-Sm protein complex	1.24E-03
9	GO:0005853: eukaryotic translation elongation factor 1 complex	1.24E-03
10	GO:0000325: plant-type vacuole	1.40E-03
11	GO:0005737: cytoplasm	5.20E-03
12	GO:0000148: 1,3-beta-D-glucan synthase complex	7.19E-03
13	GO:0016020: membrane	1.04E-02
14	GO:0016602: CCAAT-binding factor complex	1.37E-02
15	GO:0030176: integral component of endoplasmic reticulum membrane	1.61E-02
16	GO:0012505: endomembrane system	2.55E-02
17	GO:0005770: late endosome	3.06E-02
18	GO:0009504: cell plate	3.39E-02
19	GO:0043231: intracellular membrane-bounded organelle	4.21E-02
20	GO:0005778: peroxisomal membrane	4.25E-02