GO Enrichment Analysis of Co-expressed Genes with
AT1G24625
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0006066: alcohol metabolic process | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 8.47E-11 |
| 7 | GO:0015979: photosynthesis | 1.29E-07 |
| 8 | GO:0071588: hydrogen peroxide mediated signaling pathway | 8.96E-05 |
| 9 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 8.96E-05 |
| 10 | GO:0009443: pyridoxal 5'-phosphate salvage | 8.96E-05 |
| 11 | GO:1904966: positive regulation of vitamin E biosynthetic process | 8.96E-05 |
| 12 | GO:1904964: positive regulation of phytol biosynthetic process | 8.96E-05 |
| 13 | GO:0009735: response to cytokinin | 1.91E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.12E-04 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.12E-04 |
| 16 | GO:2000030: regulation of response to red or far red light | 2.12E-04 |
| 17 | GO:0044208: 'de novo' AMP biosynthetic process | 2.12E-04 |
| 18 | GO:0055114: oxidation-reduction process | 2.34E-04 |
| 19 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.49E-04 |
| 20 | GO:0061077: chaperone-mediated protein folding | 3.38E-04 |
| 21 | GO:0090506: axillary shoot meristem initiation | 3.54E-04 |
| 22 | GO:0006000: fructose metabolic process | 3.54E-04 |
| 23 | GO:0071492: cellular response to UV-A | 3.54E-04 |
| 24 | GO:0006810: transport | 3.69E-04 |
| 25 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.10E-04 |
| 26 | GO:0015976: carbon utilization | 6.78E-04 |
| 27 | GO:0071486: cellular response to high light intensity | 6.78E-04 |
| 28 | GO:0015994: chlorophyll metabolic process | 6.78E-04 |
| 29 | GO:2000122: negative regulation of stomatal complex development | 6.78E-04 |
| 30 | GO:0010037: response to carbon dioxide | 6.78E-04 |
| 31 | GO:0006656: phosphatidylcholine biosynthetic process | 8.59E-04 |
| 32 | GO:0080110: sporopollenin biosynthetic process | 8.59E-04 |
| 33 | GO:0006461: protein complex assembly | 8.59E-04 |
| 34 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.05E-03 |
| 35 | GO:0016554: cytidine to uridine editing | 1.05E-03 |
| 36 | GO:0018298: protein-chromophore linkage | 1.24E-03 |
| 37 | GO:0010067: procambium histogenesis | 1.25E-03 |
| 38 | GO:0010019: chloroplast-nucleus signaling pathway | 1.25E-03 |
| 39 | GO:0010196: nonphotochemical quenching | 1.46E-03 |
| 40 | GO:0034599: cellular response to oxidative stress | 1.63E-03 |
| 41 | GO:0009819: drought recovery | 1.69E-03 |
| 42 | GO:0030091: protein repair | 1.69E-03 |
| 43 | GO:0006605: protein targeting | 1.69E-03 |
| 44 | GO:0006002: fructose 6-phosphate metabolic process | 1.93E-03 |
| 45 | GO:0009657: plastid organization | 1.93E-03 |
| 46 | GO:0017004: cytochrome complex assembly | 1.93E-03 |
| 47 | GO:0010206: photosystem II repair | 2.18E-03 |
| 48 | GO:0000373: Group II intron splicing | 2.18E-03 |
| 49 | GO:0006189: 'de novo' IMP biosynthetic process | 2.18E-03 |
| 50 | GO:0010205: photoinhibition | 2.43E-03 |
| 51 | GO:1900865: chloroplast RNA modification | 2.43E-03 |
| 52 | GO:0043069: negative regulation of programmed cell death | 2.70E-03 |
| 53 | GO:0006869: lipid transport | 2.78E-03 |
| 54 | GO:0043085: positive regulation of catalytic activity | 2.98E-03 |
| 55 | GO:0010075: regulation of meristem growth | 3.56E-03 |
| 56 | GO:0006094: gluconeogenesis | 3.56E-03 |
| 57 | GO:0005986: sucrose biosynthetic process | 3.56E-03 |
| 58 | GO:0010143: cutin biosynthetic process | 3.86E-03 |
| 59 | GO:0019253: reductive pentose-phosphate cycle | 3.86E-03 |
| 60 | GO:0010207: photosystem II assembly | 3.86E-03 |
| 61 | GO:0010223: secondary shoot formation | 3.86E-03 |
| 62 | GO:0005985: sucrose metabolic process | 4.18E-03 |
| 63 | GO:0019762: glucosinolate catabolic process | 4.50E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.17E-03 |
| 65 | GO:0010073: meristem maintenance | 5.17E-03 |
| 66 | GO:0031408: oxylipin biosynthetic process | 5.52E-03 |
| 67 | GO:0006633: fatty acid biosynthetic process | 5.94E-03 |
| 68 | GO:0010082: regulation of root meristem growth | 6.23E-03 |
| 69 | GO:0001944: vasculature development | 6.23E-03 |
| 70 | GO:0010089: xylem development | 6.61E-03 |
| 71 | GO:0010584: pollen exine formation | 6.61E-03 |
| 72 | GO:0009306: protein secretion | 6.61E-03 |
| 73 | GO:0010087: phloem or xylem histogenesis | 7.37E-03 |
| 74 | GO:0006662: glycerol ether metabolic process | 7.77E-03 |
| 75 | GO:0002229: defense response to oomycetes | 8.99E-03 |
| 76 | GO:0000302: response to reactive oxygen species | 8.99E-03 |
| 77 | GO:0042254: ribosome biogenesis | 1.03E-02 |
| 78 | GO:0010027: thylakoid membrane organization | 1.17E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.41E-02 |
| 80 | GO:0009407: toxin catabolic process | 1.51E-02 |
| 81 | GO:0010218: response to far red light | 1.51E-02 |
| 82 | GO:0009631: cold acclimation | 1.56E-02 |
| 83 | GO:0010119: regulation of stomatal movement | 1.56E-02 |
| 84 | GO:0042742: defense response to bacterium | 1.63E-02 |
| 85 | GO:0009637: response to blue light | 1.66E-02 |
| 86 | GO:0032259: methylation | 1.78E-02 |
| 87 | GO:0006631: fatty acid metabolic process | 1.88E-02 |
| 88 | GO:0010114: response to red light | 1.99E-02 |
| 89 | GO:0009644: response to high light intensity | 2.10E-02 |
| 90 | GO:0009636: response to toxic substance | 2.16E-02 |
| 91 | GO:0009409: response to cold | 2.39E-02 |
| 92 | GO:0009909: regulation of flower development | 2.65E-02 |
| 93 | GO:0018105: peptidyl-serine phosphorylation | 3.23E-02 |
| 94 | GO:0042744: hydrogen peroxide catabolic process | 4.07E-02 |
| 95 | GO:0055085: transmembrane transport | 4.17E-02 |
| 96 | GO:0006413: translational initiation | 4.44E-02 |
| 97 | GO:0040008: regulation of growth | 4.51E-02 |
| 98 | GO:0010150: leaf senescence | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 5 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 6 | GO:0019899: enzyme binding | 3.66E-05 |
| 7 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 6.09E-05 |
| 8 | GO:0016168: chlorophyll binding | 6.66E-05 |
| 9 | GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity | 8.96E-05 |
| 10 | GO:0080132: fatty acid alpha-hydroxylase activity | 8.96E-05 |
| 11 | GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | 8.96E-05 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.12E-04 |
| 13 | GO:0008967: phosphoglycolate phosphatase activity | 2.12E-04 |
| 14 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.12E-04 |
| 15 | GO:0047746: chlorophyllase activity | 2.12E-04 |
| 16 | GO:0042389: omega-3 fatty acid desaturase activity | 2.12E-04 |
| 17 | GO:0005528: FK506 binding | 2.77E-04 |
| 18 | GO:0033612: receptor serine/threonine kinase binding | 3.38E-04 |
| 19 | GO:0050734: hydroxycinnamoyltransferase activity | 3.54E-04 |
| 20 | GO:0070402: NADPH binding | 3.54E-04 |
| 21 | GO:0022891: substrate-specific transmembrane transporter activity | 4.04E-04 |
| 22 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.78E-04 |
| 23 | GO:0102490: 8-oxo-dGTP phosphohydrolase activity | 6.78E-04 |
| 24 | GO:1990137: plant seed peroxidase activity | 6.78E-04 |
| 25 | GO:0043495: protein anchor | 6.78E-04 |
| 26 | GO:0004130: cytochrome-c peroxidase activity | 1.05E-03 |
| 27 | GO:0016688: L-ascorbate peroxidase activity | 1.05E-03 |
| 28 | GO:0008200: ion channel inhibitor activity | 1.05E-03 |
| 29 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.25E-03 |
| 30 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.25E-03 |
| 31 | GO:0019900: kinase binding | 1.25E-03 |
| 32 | GO:0016491: oxidoreductase activity | 1.32E-03 |
| 33 | GO:0004033: aldo-keto reductase (NADP) activity | 1.69E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.32E-03 |
| 35 | GO:0030234: enzyme regulator activity | 2.70E-03 |
| 36 | GO:0008047: enzyme activator activity | 2.70E-03 |
| 37 | GO:0004565: beta-galactosidase activity | 3.56E-03 |
| 38 | GO:0004089: carbonate dehydratase activity | 3.56E-03 |
| 39 | GO:0031072: heat shock protein binding | 3.56E-03 |
| 40 | GO:0031409: pigment binding | 4.50E-03 |
| 41 | GO:0019843: rRNA binding | 4.73E-03 |
| 42 | GO:0008289: lipid binding | 4.89E-03 |
| 43 | GO:0043424: protein histidine kinase binding | 5.17E-03 |
| 44 | GO:0005102: receptor binding | 6.99E-03 |
| 45 | GO:0047134: protein-disulfide reductase activity | 6.99E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 8.17E-03 |
| 47 | GO:0050662: coenzyme binding | 8.17E-03 |
| 48 | GO:0048038: quinone binding | 8.99E-03 |
| 49 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.85E-03 |
| 50 | GO:0050660: flavin adenine dinucleotide binding | 1.17E-02 |
| 51 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.26E-02 |
| 52 | GO:0004683: calmodulin-dependent protein kinase activity | 1.31E-02 |
| 53 | GO:0008236: serine-type peptidase activity | 1.36E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.41E-02 |
| 55 | GO:0005509: calcium ion binding | 1.47E-02 |
| 56 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.56E-02 |
| 57 | GO:0004364: glutathione transferase activity | 1.93E-02 |
| 58 | GO:0009055: electron carrier activity | 1.99E-02 |
| 59 | GO:0051082: unfolded protein binding | 3.16E-02 |
| 60 | GO:0015035: protein disulfide oxidoreductase activity | 3.23E-02 |
| 61 | GO:0046872: metal ion binding | 3.74E-02 |
| 62 | GO:0004252: serine-type endopeptidase activity | 4.00E-02 |
| 63 | GO:0016787: hydrolase activity | 4.22E-02 |
| 64 | GO:0005516: calmodulin binding | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.69E-24 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 8.03E-21 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.74E-09 |
| 4 | GO:0009570: chloroplast stroma | 1.24E-07 |
| 5 | GO:0009941: chloroplast envelope | 1.79E-07 |
| 6 | GO:0009579: thylakoid | 2.84E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 2.95E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.64E-06 |
| 9 | GO:0048046: apoplast | 3.92E-06 |
| 10 | GO:0009523: photosystem II | 3.07E-05 |
| 11 | GO:0031977: thylakoid lumen | 1.66E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 1.97E-04 |
| 13 | GO:0042170: plastid membrane | 2.12E-04 |
| 14 | GO:0042651: thylakoid membrane | 3.07E-04 |
| 15 | GO:0016021: integral component of membrane | 4.17E-04 |
| 16 | GO:0010319: stromule | 8.61E-04 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.46E-03 |
| 18 | GO:0005811: lipid particle | 1.93E-03 |
| 19 | GO:0031969: chloroplast membrane | 1.97E-03 |
| 20 | GO:0009706: chloroplast inner membrane | 3.79E-03 |
| 21 | GO:0030076: light-harvesting complex | 4.18E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 5.17E-03 |
| 23 | GO:0009522: photosystem I | 8.17E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 8.58E-03 |
| 25 | GO:0046658: anchored component of plasma membrane | 8.64E-03 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.17E-02 |
| 27 | GO:0010287: plastoglobule | 3.57E-02 |