co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G23960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
2	GO:0006227: dUDP biosynthetic process	0.00E+00
3	GO:0006233: dTDP biosynthetic process	0.00E+00
4	GO:0034477: U6 snRNA 3'-end processing	0.00E+00
5	GO:0006235: dTTP biosynthetic process	0.00E+00
6	GO:0070534: protein K63-linked ubiquitination	9.35E-07
7	GO:0006301: postreplication repair	2.51E-06
8	GO:0006914: autophagy	3.37E-06
9	GO:0006501: C-terminal protein lipidation	6.72E-05
10	GO:1902000: homogentisate catabolic process	6.72E-05
11	GO:0006635: fatty acid beta-oxidation	1.37E-04
12	GO:0006572: tyrosine catabolic process	1.76E-04
13	GO:0051259: protein oligomerization	1.76E-04
14	GO:0019438: aromatic compound biosynthetic process	1.76E-04
15	GO:0044804: nucleophagy	2.39E-04
16	GO:0010222: stem vascular tissue pattern formation	2.39E-04
17	GO:0000422: mitophagy	3.07E-04
18	GO:0046907: intracellular transport	3.07E-04
19	GO:0006559: L-phenylalanine catabolic process	3.78E-04
20	GO:0000045: autophagosome assembly	3.78E-04
21	GO:0008202: steroid metabolic process	8.68E-04
22	GO:0010039: response to iron ion	1.45E-03
23	GO:0010053: root epidermal cell differentiation	1.45E-03
24	GO:0006825: copper ion transport	1.78E-03
25	GO:0006979: response to oxidative stress	2.19E-03
26	GO:0015031: protein transport	2.93E-03
27	GO:0016032: viral process	3.19E-03
28	GO:0006464: cellular protein modification process	3.47E-03
29	GO:0010286: heat acclimation	3.62E-03
30	GO:0007568: aging	5.18E-03
31	GO:0055114: oxidation-reduction process	5.94E-03
32	GO:0006631: fatty acid metabolic process	6.21E-03
33	GO:0009926: auxin polar transport	6.57E-03
34	GO:0009744: response to sucrose	6.57E-03
35	GO:0009416: response to light stimulus	6.74E-03
36	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.50E-03
37	GO:0006511: ubiquitin-dependent protein catabolic process	9.15E-03
38	GO:0008380: RNA splicing	1.73E-02
39	GO:0009826: unidimensional cell growth	2.02E-02
40	GO:0046686: response to cadmium ion	2.14E-02
41	GO:0080167: response to karrikin	2.42E-02
42	GO:0045454: cell redox homeostasis	2.75E-02
43	GO:0006869: lipid transport	2.94E-02
44	GO:0032259: methylation	3.10E-02
45	GO:0009793: embryo development ending in seed dormancy	3.17E-02
46	GO:0006397: mRNA processing	3.29E-02
47	GO:0009753: response to jasmonic acid	3.36E-02
48	GO:0009734: auxin-activated signaling pathway	4.07E-02
49	GO:0016567: protein ubiquitination	4.16E-02
50	GO:0009555: pollen development	4.80E-02
51	GO:0009611: response to wounding	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004798: thymidylate kinase activity	0.00E+00
2	GO:0004411: homogentisate 1,2-dioxygenase activity	0.00E+00
3	GO:0048244: phytanoyl-CoA dioxygenase activity	0.00E+00
4	GO:0030544: Hsp70 protein binding	2.64E-05
5	GO:0004566: beta-glucuronidase activity	6.72E-05
6	GO:0016531: copper chaperone activity	1.18E-04
7	GO:0004300: enoyl-CoA hydratase activity	1.76E-04
8	GO:0009041: uridylate kinase activity	1.76E-04
9	GO:0003995: acyl-CoA dehydrogenase activity	2.39E-04
10	GO:0019776: Atg8 ligase activity	2.39E-04
11	GO:0003997: acyl-CoA oxidase activity	3.07E-04
12	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.78E-04
13	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.53E-04
14	GO:0031625: ubiquitin protein ligase binding	6.45E-04
15	GO:0008142: oxysterol binding	6.94E-04
16	GO:0009672: auxin:proton symporter activity	8.68E-04
17	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.68E-04
18	GO:0008171: O-methyltransferase activity	9.59E-04
19	GO:0000175: 3'-5'-exoribonuclease activity	1.25E-03
20	GO:0031418: L-ascorbic acid binding	1.67E-03
21	GO:0061630: ubiquitin protein ligase activity	2.73E-03
22	GO:0004518: nuclease activity	3.19E-03
23	GO:0004842: ubiquitin-protein transferase activity	3.26E-03
24	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.33E-03
25	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.53E-03
26	GO:0004386: helicase activity	1.10E-02
27	GO:0008017: microtubule binding	1.57E-02
28	GO:0016491: oxidoreductase activity	1.80E-02
29	GO:0046983: protein dimerization activity	1.83E-02
30	GO:0050660: flavin adenine dinucleotide binding	2.30E-02
31	GO:0005515: protein binding	2.83E-02
32	GO:0008289: lipid binding	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0031372: UBC13-MMS2 complex	9.35E-07
2	GO:0034274: Atg12-Atg5-Atg16 complex	6.72E-05
3	GO:0032586: protein storage vacuole membrane	2.39E-04
4	GO:0000421: autophagosome membrane	6.10E-04
5	GO:0005789: endoplasmic reticulum membrane	6.29E-04
6	GO:0034045: pre-autophagosomal structure membrane	6.94E-04
7	GO:0000326: protein storage vacuole	6.94E-04
8	GO:0009514: glyoxysome	6.94E-04
9	GO:0005765: lysosomal membrane	1.05E-03
10	GO:0005758: mitochondrial intermembrane space	1.67E-03
11	GO:0031410: cytoplasmic vesicle	2.02E-03
12	GO:0005829: cytosol	7.35E-03
13	GO:0005777: peroxisome	7.73E-03
14	GO:0005654: nucleoplasm	1.19E-02
15	GO:0005759: mitochondrial matrix	1.42E-02
16	GO:0005737: cytoplasm	1.56E-02
17	GO:0005874: microtubule	2.36E-02
18	GO:0043231: intracellular membrane-bounded organelle	3.42E-02
19	GO:0016021: integral component of membrane	3.49E-02