Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G23490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000024: regulation of leaf development2.30E-06
2GO:0048358: mucilage pectin biosynthetic process9.64E-06
3GO:0080178: 5-carbamoylmethyl uridine residue modification9.64E-06
4GO:0010393: galacturonan metabolic process9.64E-06
5GO:0034976: response to endoplasmic reticulum stress9.64E-06
6GO:0071217: cellular response to external biotic stimulus2.58E-05
7GO:0031538: negative regulation of anthocyanin metabolic process2.58E-05
8GO:0046898: response to cycloheximide2.58E-05
9GO:0032784: regulation of DNA-templated transcription, elongation4.69E-05
10GO:0010272: response to silver ion4.69E-05
11GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition4.69E-05
12GO:0051601: exocyst localization7.16E-05
13GO:0048530: fruit morphogenesis7.16E-05
14GO:0080001: mucilage extrusion from seed coat7.16E-05
15GO:0002098: tRNA wobble uridine modification9.96E-05
16GO:1902183: regulation of shoot apical meristem development1.30E-04
17GO:0048359: mucilage metabolic process involved in seed coat development1.30E-04
18GO:0047484: regulation of response to osmotic stress1.63E-04
19GO:0006751: glutathione catabolic process1.63E-04
20GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.98E-04
21GO:1901001: negative regulation of response to salt stress1.98E-04
22GO:0006400: tRNA modification2.34E-04
23GO:1902074: response to salt2.34E-04
24GO:0045995: regulation of embryonic development2.34E-04
25GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.34E-04
26GO:0010928: regulation of auxin mediated signaling pathway2.72E-04
27GO:0035265: organ growth2.72E-04
28GO:0009787: regulation of abscisic acid-activated signaling pathway2.72E-04
29GO:0009827: plant-type cell wall modification3.11E-04
30GO:0060321: acceptance of pollen3.11E-04
31GO:0010018: far-red light signaling pathway3.93E-04
32GO:0043069: negative regulation of programmed cell death4.35E-04
33GO:0010192: mucilage biosynthetic process4.35E-04
34GO:0018107: peptidyl-threonine phosphorylation5.68E-04
35GO:0042753: positive regulation of circadian rhythm7.09E-04
36GO:0009944: polarity specification of adaxial/abaxial axis7.58E-04
37GO:0010073: meristem maintenance8.07E-04
38GO:0045454: cell redox homeostasis9.35E-04
39GO:0071215: cellular response to abscisic acid stimulus9.61E-04
40GO:0008284: positive regulation of cell proliferation1.07E-03
41GO:0009639: response to red or far red light1.53E-03
42GO:0001666: response to hypoxia1.72E-03
43GO:0009615: response to virus1.72E-03
44GO:0009816: defense response to bacterium, incompatible interaction1.78E-03
45GO:0006974: cellular response to DNA damage stimulus1.85E-03
46GO:0008219: cell death2.05E-03
47GO:0045893: positive regulation of transcription, DNA-templated2.27E-03
48GO:0006457: protein folding2.55E-03
49GO:0006887: exocytosis2.70E-03
50GO:0008283: cell proliferation2.85E-03
51GO:0009965: leaf morphogenesis3.08E-03
52GO:0009846: pollen germination3.32E-03
53GO:0009585: red, far-red light phototransduction3.49E-03
54GO:0009909: regulation of flower development3.74E-03
55GO:0006979: response to oxidative stress4.00E-03
56GO:0009620: response to fungus4.17E-03
57GO:0009624: response to nematode4.43E-03
58GO:0018105: peptidyl-serine phosphorylation4.52E-03
59GO:0009790: embryo development5.75E-03
60GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.98E-03
61GO:0008380: RNA splicing7.30E-03
62GO:0009617: response to bacterium7.30E-03
63GO:0009793: embryo development ending in seed dormancy9.14E-03
64GO:0009860: pollen tube growth9.21E-03
65GO:0046777: protein autophosphorylation1.07E-02
66GO:0045892: negative regulation of transcription, DNA-templated1.17E-02
67GO:0006397: mRNA processing1.38E-02
68GO:0009734: auxin-activated signaling pathway1.71E-02
69GO:0009908: flower development1.87E-02
70GO:0009738: abscisic acid-activated signaling pathway1.96E-02
71GO:0009611: response to wounding2.04E-02
72GO:0035556: intracellular signal transduction2.09E-02
73GO:0055085: transmembrane transport2.38E-02
74GO:0006511: ubiquitin-dependent protein catabolic process2.50E-02
75GO:0009414: response to water deprivation3.27E-02
76GO:0042742: defense response to bacterium3.33E-02
77GO:0030154: cell differentiation3.54E-02
78GO:0009733: response to auxin3.61E-02
RankGO TermAdjusted P value
1GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
2GO:0003756: protein disulfide isomerase activity1.96E-05
3GO:0070181: small ribosomal subunit rRNA binding4.69E-05
4GO:0008312: 7S RNA binding2.72E-04
5GO:0003713: transcription coactivator activity1.18E-03
6GO:0016853: isomerase activity1.23E-03
7GO:0004004: ATP-dependent RNA helicase activity1.92E-03
8GO:0000149: SNARE binding2.55E-03
9GO:0016746: transferase activity, transferring acyl groups4.52E-03
10GO:0008026: ATP-dependent helicase activity4.61E-03
11GO:0003729: mRNA binding5.88E-03
12GO:0042626: ATPase activity, coupled to transmembrane movement of substances7.62E-03
13GO:0016787: hydrolase activity8.47E-03
14GO:0005524: ATP binding1.13E-02
15GO:0003924: GTPase activity1.34E-02
16GO:0003676: nucleic acid binding1.63E-02
17GO:0005515: protein binding1.87E-02
18GO:0000166: nucleotide binding2.01E-02
19GO:0005525: GTP binding2.87E-02
20GO:0003723: RNA binding3.10E-02
RankGO TermAdjusted P value
1GO:0033588: Elongator holoenzyme complex7.16E-05
2GO:0031595: nuclear proteasome complex2.34E-04
3GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.11E-04
4GO:0009506: plasmodesma4.48E-04
5GO:0008541: proteasome regulatory particle, lid subcomplex4.78E-04
6GO:0032040: small-subunit processome5.23E-04
7GO:0005783: endoplasmic reticulum8.97E-04
8GO:0000145: exocyst1.41E-03
9GO:0005829: cytosol1.57E-03
10GO:0005788: endoplasmic reticulum lumen1.78E-03
11GO:0015934: large ribosomal subunit2.26E-03
12GO:0005634: nucleus2.42E-03
13GO:0005856: cytoskeleton3.08E-03
14GO:0000502: proteasome complex3.49E-03
15GO:0005681: spliceosomal complex3.90E-03
16GO:0009524: phragmoplast5.36E-03
17GO:0005737: cytoplasm7.04E-03
18GO:0005622: intracellular3.03E-02
19GO:0005730: nucleolus4.84E-02
Gene type



Gene DE type