Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G23140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0001881: receptor recycling0.00E+00
2GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:0070328: triglyceride homeostasis0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:0002376: immune system process0.00E+00
7GO:0055091: phospholipid homeostasis0.00E+00
8GO:0030149: sphingolipid catabolic process0.00E+00
9GO:0009398: FMN biosynthetic process0.00E+00
10GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
11GO:0016036: cellular response to phosphate starvation1.42E-06
12GO:0007034: vacuolar transport1.24E-05
13GO:0009247: glycolipid biosynthetic process2.73E-05
14GO:0030643: cellular phosphate ion homeostasis5.74E-05
15GO:0030163: protein catabolic process1.11E-04
16GO:0031998: regulation of fatty acid beta-oxidation1.44E-04
17GO:0048508: embryonic meristem development1.44E-04
18GO:0033306: phytol metabolic process1.44E-04
19GO:0009962: regulation of flavonoid biosynthetic process1.44E-04
20GO:0003400: regulation of COPII vesicle coating1.44E-04
21GO:0046506: sulfolipid biosynthetic process1.44E-04
22GO:1900424: regulation of defense response to bacterium1.44E-04
23GO:0080093: regulation of photorespiration1.44E-04
24GO:0046685: response to arsenic-containing substance1.53E-04
25GO:0006511: ubiquitin-dependent protein catabolic process2.80E-04
26GO:0015824: proline transport3.29E-04
27GO:0051262: protein tetramerization3.29E-04
28GO:0055088: lipid homeostasis3.29E-04
29GO:0009915: phloem sucrose loading3.29E-04
30GO:0019374: galactolipid metabolic process3.29E-04
31GO:0009945: radial axis specification3.29E-04
32GO:0019752: carboxylic acid metabolic process3.29E-04
33GO:0046475: glycerophospholipid catabolic process3.29E-04
34GO:1902000: homogentisate catabolic process3.29E-04
35GO:0097054: L-glutamate biosynthetic process3.29E-04
36GO:0006099: tricarboxylic acid cycle3.32E-04
37GO:0009617: response to bacterium3.86E-04
38GO:0006631: fatty acid metabolic process3.92E-04
39GO:0009410: response to xenobiotic stimulus5.40E-04
40GO:0009072: aromatic amino acid family metabolic process5.40E-04
41GO:0010581: regulation of starch biosynthetic process5.40E-04
42GO:0008333: endosome to lysosome transport5.40E-04
43GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway5.40E-04
44GO:1900140: regulation of seedling development5.40E-04
45GO:0006825: copper ion transport5.75E-04
46GO:0009651: response to salt stress6.76E-04
47GO:0006537: glutamate biosynthetic process7.73E-04
48GO:0001676: long-chain fatty acid metabolic process7.73E-04
49GO:0055089: fatty acid homeostasis7.73E-04
50GO:0006817: phosphate ion transport8.13E-04
51GO:0019722: calcium-mediated signaling8.13E-04
52GO:0009626: plant-type hypersensitive response8.48E-04
53GO:0019676: ammonia assimilation cycle1.02E-03
54GO:0060548: negative regulation of cell death1.02E-03
55GO:0045727: positive regulation of translation1.02E-03
56GO:0010107: potassium ion import1.02E-03
57GO:0010193: response to ozone1.24E-03
58GO:0031365: N-terminal protein amino acid modification1.29E-03
59GO:0006097: glyoxylate cycle1.29E-03
60GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.59E-03
61GO:0010405: arabinogalactan protein metabolic process1.59E-03
62GO:0018258: protein O-linked glycosylation via hydroxyproline1.59E-03
63GO:0010337: regulation of salicylic acid metabolic process1.59E-03
64GO:0009228: thiamine biosynthetic process1.59E-03
65GO:0009816: defense response to bacterium, incompatible interaction1.88E-03
66GO:0010555: response to mannitol1.91E-03
67GO:2000067: regulation of root morphogenesis1.91E-03
68GO:0015977: carbon fixation1.91E-03
69GO:0000911: cytokinesis by cell plate formation1.91E-03
70GO:0009612: response to mechanical stimulus1.91E-03
71GO:0009942: longitudinal axis specification1.91E-03
72GO:0010189: vitamin E biosynthetic process1.91E-03
73GO:0006955: immune response2.24E-03
74GO:0043090: amino acid import2.24E-03
75GO:1900056: negative regulation of leaf senescence2.24E-03
76GO:0070370: cellular heat acclimation2.24E-03
77GO:0008219: cell death2.31E-03
78GO:0055114: oxidation-reduction process2.32E-03
79GO:0009231: riboflavin biosynthetic process2.60E-03
80GO:0006102: isocitrate metabolic process2.60E-03
81GO:0019375: galactolipid biosynthetic process2.60E-03
82GO:0006865: amino acid transport2.79E-03
83GO:0022900: electron transport chain2.96E-03
84GO:0007186: G-protein coupled receptor signaling pathway2.96E-03
85GO:0010262: somatic embryogenesis2.96E-03
86GO:0030968: endoplasmic reticulum unfolded protein response2.96E-03
87GO:0009051: pentose-phosphate shunt, oxidative branch3.35E-03
88GO:0019432: triglyceride biosynthetic process3.35E-03
89GO:0046916: cellular transition metal ion homeostasis3.35E-03
90GO:0048354: mucilage biosynthetic process involved in seed coat development3.76E-03
91GO:0009644: response to high light intensity4.06E-03
92GO:0009870: defense response signaling pathway, resistance gene-dependent4.18E-03
93GO:0006032: chitin catabolic process4.18E-03
94GO:0009409: response to cold4.35E-03
95GO:0006816: calcium ion transport4.61E-03
96GO:0015770: sucrose transport4.61E-03
97GO:0000272: polysaccharide catabolic process4.61E-03
98GO:0009750: response to fructose4.61E-03
99GO:0015706: nitrate transport5.06E-03
100GO:0006890: retrograde vesicle-mediated transport, Golgi to ER5.06E-03
101GO:0006108: malate metabolic process5.52E-03
102GO:0006006: glucose metabolic process5.52E-03
103GO:0045454: cell redox homeostasis5.59E-03
104GO:0009266: response to temperature stimulus6.00E-03
105GO:0034605: cellular response to heat6.00E-03
106GO:0010167: response to nitrate6.50E-03
107GO:0046688: response to copper ion6.50E-03
108GO:0006071: glycerol metabolic process7.00E-03
109GO:0006636: unsaturated fatty acid biosynthetic process7.00E-03
110GO:0009863: salicylic acid mediated signaling pathway7.52E-03
111GO:0009695: jasmonic acid biosynthetic process8.06E-03
112GO:0031408: oxylipin biosynthetic process8.61E-03
113GO:0016998: cell wall macromolecule catabolic process8.61E-03
114GO:0009814: defense response, incompatible interaction9.17E-03
115GO:0035428: hexose transmembrane transport9.17E-03
116GO:0009737: response to abscisic acid9.58E-03
117GO:0042742: defense response to bacterium9.96E-03
118GO:0010091: trichome branching1.03E-02
119GO:0009306: protein secretion1.03E-02
120GO:0042147: retrograde transport, endosome to Golgi1.09E-02
121GO:0010118: stomatal movement1.16E-02
122GO:0042391: regulation of membrane potential1.16E-02
123GO:0046323: glucose import1.22E-02
124GO:0006520: cellular amino acid metabolic process1.22E-02
125GO:0061025: membrane fusion1.28E-02
126GO:0006623: protein targeting to vacuole1.35E-02
127GO:0010183: pollen tube guidance1.35E-02
128GO:0009749: response to glucose1.35E-02
129GO:0008654: phospholipid biosynthetic process1.35E-02
130GO:0007166: cell surface receptor signaling pathway1.42E-02
131GO:1901657: glycosyl compound metabolic process1.55E-02
132GO:0009611: response to wounding1.56E-02
133GO:0051607: defense response to virus1.76E-02
134GO:0001666: response to hypoxia1.84E-02
135GO:0009627: systemic acquired resistance1.99E-02
136GO:0042128: nitrate assimilation1.99E-02
137GO:0006888: ER to Golgi vesicle-mediated transport2.06E-02
138GO:0006970: response to osmotic stress2.08E-02
139GO:0016311: dephosphorylation2.14E-02
140GO:0009407: toxin catabolic process2.38E-02
141GO:0010043: response to zinc ion2.46E-02
142GO:0010200: response to chitin2.48E-02
143GO:0016192: vesicle-mediated transport2.52E-02
144GO:0044550: secondary metabolite biosynthetic process2.60E-02
145GO:0009853: photorespiration2.63E-02
146GO:0030001: metal ion transport2.88E-02
147GO:0042542: response to hydrogen peroxide3.06E-02
148GO:0009744: response to sucrose3.15E-02
149GO:0051707: response to other organism3.15E-02
150GO:0008643: carbohydrate transport3.33E-02
151GO:0006468: protein phosphorylation3.39E-02
152GO:0016042: lipid catabolic process3.43E-02
153GO:0006629: lipid metabolic process3.53E-02
154GO:0031347: regulation of defense response3.60E-02
155GO:0006979: response to oxidative stress3.69E-02
156GO:0006486: protein glycosylation3.89E-02
157GO:0051603: proteolysis involved in cellular protein catabolic process3.98E-02
158GO:0015031: protein transport4.90E-02
159GO:0009624: response to nematode4.99E-02
RankGO TermAdjusted P value
1GO:0016034: maleylacetoacetate isomerase activity0.00E+00
2GO:0008531: riboflavin kinase activity0.00E+00
3GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
4GO:0015930: glutamate synthase activity0.00E+00
5GO:0046510: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity0.00E+00
6GO:0010176: homogentisate phytyltransferase activity0.00E+00
7GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
8GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0004298: threonine-type endopeptidase activity3.01E-05
10GO:0080042: ADP-glucose pyrophosphohydrolase activity1.44E-04
11GO:0005090: Sar guanyl-nucleotide exchange factor activity1.44E-04
12GO:0004321: fatty-acyl-CoA synthase activity1.44E-04
13GO:0016041: glutamate synthase (ferredoxin) activity1.44E-04
14GO:0005515: protein binding3.19E-04
15GO:0052739: phosphatidylserine 1-acylhydrolase activity3.29E-04
16GO:0080041: ADP-ribose pyrophosphohydrolase activity3.29E-04
17GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity3.29E-04
18GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.29E-04
19GO:0017110: nucleoside-diphosphatase activity3.29E-04
20GO:0003919: FMN adenylyltransferase activity3.29E-04
21GO:0019172: glyoxalase III activity3.29E-04
22GO:0004338: glucan exo-1,3-beta-glucosidase activity3.29E-04
23GO:0004450: isocitrate dehydrogenase (NADP+) activity3.29E-04
24GO:0001664: G-protein coupled receptor binding5.40E-04
25GO:0016531: copper chaperone activity5.40E-04
26GO:0031683: G-protein beta/gamma-subunit complex binding5.40E-04
27GO:0008964: phosphoenolpyruvate carboxylase activity5.40E-04
28GO:0015193: L-proline transmembrane transporter activity5.40E-04
29GO:0004601: peroxidase activity5.76E-04
30GO:0022891: substrate-specific transmembrane transporter activity7.50E-04
31GO:0008233: peptidase activity7.78E-04
32GO:0004659: prenyltransferase activity1.02E-03
33GO:0004345: glucose-6-phosphate dehydrogenase activity1.02E-03
34GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.02E-03
35GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.02E-03
36GO:0004722: protein serine/threonine phosphatase activity1.20E-03
37GO:0008374: O-acyltransferase activity1.29E-03
38GO:0015145: monosaccharide transmembrane transporter activity1.29E-03
39GO:0004623: phospholipase A2 activity1.29E-03
40GO:0000104: succinate dehydrogenase activity1.29E-03
41GO:0047631: ADP-ribose diphosphatase activity1.29E-03
42GO:0051538: 3 iron, 4 sulfur cluster binding1.29E-03
43GO:1990714: hydroxyproline O-galactosyltransferase activity1.59E-03
44GO:0000210: NAD+ diphosphatase activity1.59E-03
45GO:0016615: malate dehydrogenase activity1.59E-03
46GO:0051020: GTPase binding1.91E-03
47GO:0051920: peroxiredoxin activity1.91E-03
48GO:0102391: decanoate--CoA ligase activity1.91E-03
49GO:0030060: L-malate dehydrogenase activity1.91E-03
50GO:0004602: glutathione peroxidase activity1.91E-03
51GO:0004144: diacylglycerol O-acyltransferase activity1.91E-03
52GO:0019900: kinase binding1.91E-03
53GO:0016831: carboxy-lyase activity2.24E-03
54GO:0008506: sucrose:proton symporter activity2.24E-03
55GO:0008235: metalloexopeptidase activity2.24E-03
56GO:0004467: long-chain fatty acid-CoA ligase activity2.24E-03
57GO:0004714: transmembrane receptor protein tyrosine kinase activity2.60E-03
58GO:0016209: antioxidant activity2.60E-03
59GO:0008970: phosphatidylcholine 1-acylhydrolase activity2.96E-03
60GO:0046914: transition metal ion binding2.96E-03
61GO:0003993: acid phosphatase activity3.05E-03
62GO:0000287: magnesium ion binding3.31E-03
63GO:0016207: 4-coumarate-CoA ligase activity3.35E-03
64GO:0008889: glycerophosphodiester phosphodiesterase activity3.35E-03
65GO:0015112: nitrate transmembrane transporter activity3.76E-03
66GO:0004568: chitinase activity4.18E-03
67GO:0015293: symporter activity4.22E-03
68GO:0051287: NAD binding4.54E-03
69GO:0008794: arsenate reductase (glutaredoxin) activity4.61E-03
70GO:0004177: aminopeptidase activity4.61E-03
71GO:0004672: protein kinase activity5.02E-03
72GO:0008378: galactosyltransferase activity5.06E-03
73GO:0015114: phosphate ion transmembrane transporter activity5.52E-03
74GO:0005388: calcium-transporting ATPase activity5.52E-03
75GO:0005315: inorganic phosphate transmembrane transporter activity5.52E-03
76GO:0015171: amino acid transmembrane transporter activity5.59E-03
77GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.00E-03
78GO:0004190: aspartic-type endopeptidase activity6.50E-03
79GO:0030552: cAMP binding6.50E-03
80GO:0030553: cGMP binding6.50E-03
81GO:0008061: chitin binding6.50E-03
82GO:0004725: protein tyrosine phosphatase activity7.00E-03
83GO:0003924: GTPase activity7.30E-03
84GO:0043424: protein histidine kinase binding8.06E-03
85GO:0005216: ion channel activity8.06E-03
86GO:0033612: receptor serine/threonine kinase binding8.61E-03
87GO:0016787: hydrolase activity9.68E-03
88GO:0008810: cellulase activity9.75E-03
89GO:0015144: carbohydrate transmembrane transporter activity1.08E-02
90GO:0005249: voltage-gated potassium channel activity1.16E-02
91GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.16E-02
92GO:0030551: cyclic nucleotide binding1.16E-02
93GO:0005351: sugar:proton symporter activity1.21E-02
94GO:0005355: glucose transmembrane transporter activity1.28E-02
95GO:0004674: protein serine/threonine kinase activity1.45E-02
96GO:0016791: phosphatase activity1.62E-02
97GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.69E-02
98GO:0008237: metallopeptidase activity1.69E-02
99GO:0102483: scopolin beta-glucosidase activity2.06E-02
100GO:0004806: triglyceride lipase activity2.06E-02
101GO:0004721: phosphoprotein phosphatase activity2.06E-02
102GO:0030247: polysaccharide binding2.06E-02
103GO:0005096: GTPase activator activity2.30E-02
104GO:0005516: calmodulin binding2.53E-02
105GO:0004712: protein serine/threonine/tyrosine kinase activity2.80E-02
106GO:0008422: beta-glucosidase activity2.80E-02
107GO:0005525: GTP binding2.83E-02
108GO:0050661: NADP binding2.88E-02
109GO:0016301: kinase activity2.90E-02
110GO:0004871: signal transducer activity3.00E-02
111GO:0004364: glutathione transferase activity3.06E-02
112GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.09E-02
113GO:0005484: SNAP receptor activity3.15E-02
114GO:0046872: metal ion binding3.91E-02
115GO:0016298: lipase activity3.98E-02
116GO:0003824: catalytic activity4.10E-02
117GO:0016874: ligase activity4.78E-02
118GO:0005524: ATP binding4.96E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane7.39E-08
2GO:0000502: proteasome complex3.09E-06
3GO:0030139: endocytic vesicle3.82E-06
4GO:0005839: proteasome core complex3.01E-05
5GO:0019773: proteasome core complex, alpha-subunit complex1.25E-04
6GO:0005783: endoplasmic reticulum4.65E-04
7GO:0032585: multivesicular body membrane7.73E-04
8GO:0005777: peroxisome9.49E-04
9GO:0030660: Golgi-associated vesicle membrane1.02E-03
10GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.02E-03
11GO:0005771: multivesicular body1.59E-03
12GO:0030904: retromer complex1.59E-03
13GO:0005829: cytosol2.03E-03
14GO:0009986: cell surface2.24E-03
15GO:0005774: vacuolar membrane2.35E-03
16GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.60E-03
17GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane2.60E-03
18GO:0031901: early endosome membrane3.35E-03
19GO:0031090: organelle membrane3.35E-03
20GO:0031902: late endosome membrane3.46E-03
21GO:0090406: pollen tube3.75E-03
22GO:0005765: lysosomal membrane4.61E-03
23GO:0008541: proteasome regulatory particle, lid subcomplex4.61E-03
24GO:0016602: CCAAT-binding factor complex5.52E-03
25GO:0005747: mitochondrial respiratory chain complex I6.16E-03
26GO:0030176: integral component of endoplasmic reticulum membrane6.50E-03
27GO:0005769: early endosome7.00E-03
28GO:0005737: cytoplasm7.19E-03
29GO:0005758: mitochondrial intermembrane space7.52E-03
30GO:0045271: respiratory chain complex I8.06E-03
31GO:0005623: cell9.23E-03
32GO:0005887: integral component of plasma membrane1.08E-02
33GO:0009504: cell plate1.35E-02
34GO:0000785: chromatin1.48E-02
35GO:0046658: anchored component of plasma membrane1.65E-02
36GO:0005773: vacuole1.68E-02
37GO:0009707: chloroplast outer membrane2.22E-02
38GO:0031969: chloroplast membrane2.39E-02
39GO:0016020: membrane2.68E-02
40GO:0016021: integral component of membrane2.82E-02
41GO:0005768: endosome3.21E-02
42GO:0031966: mitochondrial membrane3.70E-02
43GO:0009507: chloroplast4.43E-02
44GO:0005834: heterotrimeric G-protein complex4.58E-02
45GO:0009536: plastid4.69E-02
Gene type



Gene DE type