GO Enrichment Analysis of Co-expressed Genes with
AT1G22750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009877: nodulation | 0.00E+00 |
| 2 | GO:0043171: peptide catabolic process | 0.00E+00 |
| 3 | GO:0042906: xanthine transport | 0.00E+00 |
| 4 | GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0030644: cellular chloride ion homeostasis | 0.00E+00 |
| 6 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 7 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 8 | GO:0051928: positive regulation of calcium ion transport | 0.00E+00 |
| 9 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 10 | GO:0009645: response to low light intensity stimulus | 1.01E-04 |
| 11 | GO:0015812: gamma-aminobutyric acid transport | 1.71E-04 |
| 12 | GO:0035494: SNARE complex disassembly | 1.71E-04 |
| 13 | GO:0044550: secondary metabolite biosynthetic process | 2.34E-04 |
| 14 | GO:0055129: L-proline biosynthetic process | 3.87E-04 |
| 15 | GO:0048255: mRNA stabilization | 3.87E-04 |
| 16 | GO:0015857: uracil transport | 3.87E-04 |
| 17 | GO:1902884: positive regulation of response to oxidative stress | 3.87E-04 |
| 18 | GO:1902000: homogentisate catabolic process | 3.87E-04 |
| 19 | GO:0000256: allantoin catabolic process | 3.87E-04 |
| 20 | GO:0035335: peptidyl-tyrosine dephosphorylation | 3.87E-04 |
| 21 | GO:0015720: allantoin transport | 3.87E-04 |
| 22 | GO:0006883: cellular sodium ion homeostasis | 3.87E-04 |
| 23 | GO:0009072: aromatic amino acid family metabolic process | 6.32E-04 |
| 24 | GO:1902448: positive regulation of shade avoidance | 6.32E-04 |
| 25 | GO:0071705: nitrogen compound transport | 6.32E-04 |
| 26 | GO:0010136: ureide catabolic process | 6.32E-04 |
| 27 | GO:0071230: cellular response to amino acid stimulus | 6.32E-04 |
| 28 | GO:1901562: response to paraquat | 6.32E-04 |
| 29 | GO:0045165: cell fate commitment | 6.32E-04 |
| 30 | GO:0009644: response to high light intensity | 6.55E-04 |
| 31 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.27E-04 |
| 32 | GO:0003333: amino acid transmembrane transport | 7.97E-04 |
| 33 | GO:0010601: positive regulation of auxin biosynthetic process | 9.04E-04 |
| 34 | GO:0006145: purine nucleobase catabolic process | 9.04E-04 |
| 35 | GO:1901332: negative regulation of lateral root development | 9.04E-04 |
| 36 | GO:0006572: tyrosine catabolic process | 9.04E-04 |
| 37 | GO:0009416: response to light stimulus | 1.14E-03 |
| 38 | GO:0009765: photosynthesis, light harvesting | 1.20E-03 |
| 39 | GO:2000306: positive regulation of photomorphogenesis | 1.20E-03 |
| 40 | GO:1901002: positive regulation of response to salt stress | 1.20E-03 |
| 41 | GO:0015846: polyamine transport | 1.20E-03 |
| 42 | GO:0042594: response to starvation | 1.20E-03 |
| 43 | GO:0035556: intracellular signal transduction | 1.25E-03 |
| 44 | GO:0016123: xanthophyll biosynthetic process | 1.52E-03 |
| 45 | GO:0009957: epidermal cell fate specification | 1.52E-03 |
| 46 | GO:0048317: seed morphogenesis | 1.87E-03 |
| 47 | GO:0045962: positive regulation of development, heterochronic | 1.87E-03 |
| 48 | GO:0000741: karyogamy | 1.87E-03 |
| 49 | GO:0002238: response to molecule of fungal origin | 1.87E-03 |
| 50 | GO:0006561: proline biosynthetic process | 1.87E-03 |
| 51 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.87E-03 |
| 52 | GO:0009409: response to cold | 1.89E-03 |
| 53 | GO:0010286: heat acclimation | 2.01E-03 |
| 54 | GO:0080060: integument development | 2.24E-03 |
| 55 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.24E-03 |
| 56 | GO:0048437: floral organ development | 2.64E-03 |
| 57 | GO:0006333: chromatin assembly or disassembly | 2.64E-03 |
| 58 | GO:0010044: response to aluminum ion | 2.64E-03 |
| 59 | GO:0032880: regulation of protein localization | 2.64E-03 |
| 60 | GO:0045995: regulation of embryonic development | 2.64E-03 |
| 61 | GO:0009395: phospholipid catabolic process | 2.64E-03 |
| 62 | GO:0048573: photoperiodism, flowering | 2.65E-03 |
| 63 | GO:0018298: protein-chromophore linkage | 2.94E-03 |
| 64 | GO:0009061: anaerobic respiration | 3.06E-03 |
| 65 | GO:0010078: maintenance of root meristem identity | 3.06E-03 |
| 66 | GO:0010468: regulation of gene expression | 3.32E-03 |
| 67 | GO:0009637: response to blue light | 3.71E-03 |
| 68 | GO:0010206: photosystem II repair | 3.95E-03 |
| 69 | GO:0034765: regulation of ion transmembrane transport | 3.95E-03 |
| 70 | GO:0010345: suberin biosynthetic process | 3.95E-03 |
| 71 | GO:0009640: photomorphogenesis | 4.78E-03 |
| 72 | GO:0010114: response to red light | 4.78E-03 |
| 73 | GO:0010162: seed dormancy process | 4.93E-03 |
| 74 | GO:0009970: cellular response to sulfate starvation | 4.93E-03 |
| 75 | GO:0055062: phosphate ion homeostasis | 4.93E-03 |
| 76 | GO:0007064: mitotic sister chromatid cohesion | 4.93E-03 |
| 77 | GO:0006535: cysteine biosynthetic process from serine | 4.93E-03 |
| 78 | GO:0009688: abscisic acid biosynthetic process | 4.93E-03 |
| 79 | GO:0009641: shade avoidance | 4.93E-03 |
| 80 | GO:0006970: response to osmotic stress | 5.07E-03 |
| 81 | GO:0008643: carbohydrate transport | 5.17E-03 |
| 82 | GO:0006816: calcium ion transport | 5.45E-03 |
| 83 | GO:0046856: phosphatidylinositol dephosphorylation | 5.45E-03 |
| 84 | GO:0000165: MAPK cascade | 5.78E-03 |
| 85 | GO:0016925: protein sumoylation | 5.98E-03 |
| 86 | GO:0042538: hyperosmotic salinity response | 5.99E-03 |
| 87 | GO:0006813: potassium ion transport | 6.43E-03 |
| 88 | GO:0050826: response to freezing | 6.54E-03 |
| 89 | GO:0010143: cutin biosynthetic process | 7.11E-03 |
| 90 | GO:0009909: regulation of flower development | 7.12E-03 |
| 91 | GO:0090351: seedling development | 7.69E-03 |
| 92 | GO:0034976: response to endoplasmic reticulum stress | 8.30E-03 |
| 93 | GO:0010025: wax biosynthetic process | 8.30E-03 |
| 94 | GO:0019344: cysteine biosynthetic process | 8.92E-03 |
| 95 | GO:0008299: isoprenoid biosynthetic process | 9.56E-03 |
| 96 | GO:0016575: histone deacetylation | 9.56E-03 |
| 97 | GO:0006874: cellular calcium ion homeostasis | 9.56E-03 |
| 98 | GO:0010026: trichome differentiation | 9.56E-03 |
| 99 | GO:0009695: jasmonic acid biosynthetic process | 9.56E-03 |
| 100 | GO:0009408: response to heat | 9.96E-03 |
| 101 | GO:0006334: nucleosome assembly | 1.02E-02 |
| 102 | GO:0048511: rhythmic process | 1.02E-02 |
| 103 | GO:0010431: seed maturation | 1.02E-02 |
| 104 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.09E-02 |
| 105 | GO:0045492: xylan biosynthetic process | 1.23E-02 |
| 106 | GO:0019722: calcium-mediated signaling | 1.23E-02 |
| 107 | GO:0016117: carotenoid biosynthetic process | 1.30E-02 |
| 108 | GO:0070417: cellular response to cold | 1.30E-02 |
| 109 | GO:0042335: cuticle development | 1.37E-02 |
| 110 | GO:0034220: ion transmembrane transport | 1.37E-02 |
| 111 | GO:0010197: polar nucleus fusion | 1.45E-02 |
| 112 | GO:0010182: sugar mediated signaling pathway | 1.45E-02 |
| 113 | GO:0061025: membrane fusion | 1.52E-02 |
| 114 | GO:0006814: sodium ion transport | 1.52E-02 |
| 115 | GO:0007623: circadian rhythm | 1.59E-02 |
| 116 | GO:0006623: protein targeting to vacuole | 1.60E-02 |
| 117 | GO:0009556: microsporogenesis | 1.60E-02 |
| 118 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.66E-02 |
| 119 | GO:0006635: fatty acid beta-oxidation | 1.68E-02 |
| 120 | GO:0009735: response to cytokinin | 1.84E-02 |
| 121 | GO:0030163: protein catabolic process | 1.84E-02 |
| 122 | GO:0006355: regulation of transcription, DNA-templated | 1.85E-02 |
| 123 | GO:0006914: autophagy | 1.93E-02 |
| 124 | GO:0071805: potassium ion transmembrane transport | 2.01E-02 |
| 125 | GO:0009555: pollen development | 2.06E-02 |
| 126 | GO:0009911: positive regulation of flower development | 2.18E-02 |
| 127 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.27E-02 |
| 128 | GO:0055114: oxidation-reduction process | 2.34E-02 |
| 129 | GO:0015995: chlorophyll biosynthetic process | 2.45E-02 |
| 130 | GO:0009817: defense response to fungus, incompatible interaction | 2.64E-02 |
| 131 | GO:0048481: plant ovule development | 2.64E-02 |
| 132 | GO:0008219: cell death | 2.64E-02 |
| 133 | GO:0016567: protein ubiquitination | 2.68E-02 |
| 134 | GO:0010218: response to far red light | 2.83E-02 |
| 135 | GO:0009723: response to ethylene | 2.85E-02 |
| 136 | GO:0010043: response to zinc ion | 2.93E-02 |
| 137 | GO:0007568: aging | 2.93E-02 |
| 138 | GO:0016051: carbohydrate biosynthetic process | 3.12E-02 |
| 139 | GO:0010200: response to chitin | 3.16E-02 |
| 140 | GO:0016192: vesicle-mediated transport | 3.21E-02 |
| 141 | GO:0015979: photosynthesis | 3.48E-02 |
| 142 | GO:0042542: response to hydrogen peroxide | 3.64E-02 |
| 143 | GO:0009926: auxin polar transport | 3.74E-02 |
| 144 | GO:0006886: intracellular protein transport | 3.77E-02 |
| 145 | GO:0009965: leaf morphogenesis | 4.06E-02 |
| 146 | GO:0007165: signal transduction | 4.25E-02 |
| 147 | GO:0009737: response to abscisic acid | 4.39E-02 |
| 148 | GO:0006629: lipid metabolic process | 4.49E-02 |
| 149 | GO:0009809: lignin biosynthetic process | 4.62E-02 |
| 150 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.74E-02 |
| 151 | GO:0009414: response to water deprivation | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 4 | GO:0008685: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | 0.00E+00 |
| 5 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 6 | GO:0019912: cyclin-dependent protein kinase activating kinase activity | 0.00E+00 |
| 7 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 8 | GO:0017091: AU-rich element binding | 1.71E-04 |
| 9 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.71E-04 |
| 10 | GO:0004349: glutamate 5-kinase activity | 1.71E-04 |
| 11 | GO:0008066: glutamate receptor activity | 1.71E-04 |
| 12 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 1.71E-04 |
| 13 | GO:0070006: metalloaminopeptidase activity | 1.71E-04 |
| 14 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.71E-04 |
| 15 | GO:0005244: voltage-gated ion channel activity | 1.71E-04 |
| 16 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.71E-04 |
| 17 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.87E-04 |
| 18 | GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity | 3.87E-04 |
| 19 | GO:0015180: L-alanine transmembrane transporter activity | 3.87E-04 |
| 20 | GO:0005274: allantoin uptake transmembrane transporter activity | 3.87E-04 |
| 21 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 3.87E-04 |
| 22 | GO:0031409: pigment binding | 5.97E-04 |
| 23 | GO:0004848: ureidoglycolate hydrolase activity | 6.32E-04 |
| 24 | GO:0005483: soluble NSF attachment protein activity | 6.32E-04 |
| 25 | GO:0019948: SUMO activating enzyme activity | 6.32E-04 |
| 26 | GO:0004707: MAP kinase activity | 7.97E-04 |
| 27 | GO:0015181: arginine transmembrane transporter activity | 9.04E-04 |
| 28 | GO:0015203: polyamine transmembrane transporter activity | 9.04E-04 |
| 29 | GO:0052866: phosphatidylinositol phosphate phosphatase activity | 9.04E-04 |
| 30 | GO:0030527: structural constituent of chromatin | 9.04E-04 |
| 31 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 9.04E-04 |
| 32 | GO:0004300: enoyl-CoA hydratase activity | 9.04E-04 |
| 33 | GO:0009001: serine O-acetyltransferase activity | 9.04E-04 |
| 34 | GO:0015189: L-lysine transmembrane transporter activity | 9.04E-04 |
| 35 | GO:0005515: protein binding | 1.12E-03 |
| 36 | GO:0015210: uracil transmembrane transporter activity | 1.20E-03 |
| 37 | GO:0005313: L-glutamate transmembrane transporter activity | 1.20E-03 |
| 38 | GO:0042277: peptide binding | 1.20E-03 |
| 39 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.20E-03 |
| 40 | GO:0019905: syntaxin binding | 1.20E-03 |
| 41 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.52E-03 |
| 42 | GO:0002020: protease binding | 1.52E-03 |
| 43 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.69E-03 |
| 44 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.83E-03 |
| 45 | GO:0004629: phospholipase C activity | 1.87E-03 |
| 46 | GO:0019825: oxygen binding | 2.12E-03 |
| 47 | GO:0070300: phosphatidic acid binding | 2.24E-03 |
| 48 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.24E-03 |
| 49 | GO:0016168: chlorophyll binding | 2.39E-03 |
| 50 | GO:0015297: antiporter activity | 2.50E-03 |
| 51 | GO:0016621: cinnamoyl-CoA reductase activity | 2.64E-03 |
| 52 | GO:0008270: zinc ion binding | 2.85E-03 |
| 53 | GO:0004525: ribonuclease III activity | 3.06E-03 |
| 54 | GO:0005267: potassium channel activity | 3.50E-03 |
| 55 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.50E-03 |
| 56 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 3.50E-03 |
| 57 | GO:0005506: iron ion binding | 3.83E-03 |
| 58 | GO:0071949: FAD binding | 3.95E-03 |
| 59 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.95E-03 |
| 60 | GO:0000989: transcription factor activity, transcription factor binding | 3.95E-03 |
| 61 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.95E-03 |
| 62 | GO:0015174: basic amino acid transmembrane transporter activity | 4.44E-03 |
| 63 | GO:0015293: symporter activity | 5.37E-03 |
| 64 | GO:0004177: aminopeptidase activity | 5.45E-03 |
| 65 | GO:0047372: acylglycerol lipase activity | 5.45E-03 |
| 66 | GO:0004497: monooxygenase activity | 6.06E-03 |
| 67 | GO:0008081: phosphoric diester hydrolase activity | 6.54E-03 |
| 68 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.54E-03 |
| 69 | GO:0005262: calcium channel activity | 6.54E-03 |
| 70 | GO:0005217: intracellular ligand-gated ion channel activity | 7.69E-03 |
| 71 | GO:0003712: transcription cofactor activity | 7.69E-03 |
| 72 | GO:0004970: ionotropic glutamate receptor activity | 7.69E-03 |
| 73 | GO:0004725: protein tyrosine phosphatase activity | 8.30E-03 |
| 74 | GO:0022857: transmembrane transporter activity | 8.63E-03 |
| 75 | GO:0020037: heme binding | 8.73E-03 |
| 76 | GO:0004407: histone deacetylase activity | 8.92E-03 |
| 77 | GO:0015079: potassium ion transmembrane transporter activity | 9.56E-03 |
| 78 | GO:0003756: protein disulfide isomerase activity | 1.23E-02 |
| 79 | GO:0008514: organic anion transmembrane transporter activity | 1.23E-02 |
| 80 | GO:0044212: transcription regulatory region DNA binding | 1.44E-02 |
| 81 | GO:0030276: clathrin binding | 1.45E-02 |
| 82 | GO:0050662: coenzyme binding | 1.52E-02 |
| 83 | GO:0005351: sugar:proton symporter activity | 1.55E-02 |
| 84 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.59E-02 |
| 85 | GO:0008237: metallopeptidase activity | 2.01E-02 |
| 86 | GO:0004842: ubiquitin-protein transferase activity | 2.34E-02 |
| 87 | GO:0008236: serine-type peptidase activity | 2.55E-02 |
| 88 | GO:0003677: DNA binding | 2.59E-02 |
| 89 | GO:0003682: chromatin binding | 2.61E-02 |
| 90 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.83E-02 |
| 91 | GO:0050897: cobalt ion binding | 2.93E-02 |
| 92 | GO:0003993: acid phosphatase activity | 3.22E-02 |
| 93 | GO:0035091: phosphatidylinositol binding | 3.96E-02 |
| 94 | GO:0015171: amino acid transmembrane transporter activity | 4.97E-02 |
| 95 | GO:0031625: ubiquitin protein ligase binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016021: integral component of membrane | 3.29E-04 |
| 2 | GO:0030076: light-harvesting complex | 5.37E-04 |
| 3 | GO:0009898: cytoplasmic side of plasma membrane | 1.20E-03 |
| 4 | GO:0032586: protein storage vacuole membrane | 1.20E-03 |
| 5 | GO:0009522: photosystem I | 1.37E-03 |
| 6 | GO:0009579: thylakoid | 1.56E-03 |
| 7 | GO:0010287: plastoglobule | 1.65E-03 |
| 8 | GO:0034045: pre-autophagosomal structure membrane | 3.50E-03 |
| 9 | GO:0000326: protein storage vacuole | 3.50E-03 |
| 10 | GO:0016020: membrane | 3.63E-03 |
| 11 | GO:0031090: organelle membrane | 3.95E-03 |
| 12 | GO:0010494: cytoplasmic stress granule | 3.95E-03 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 5.09E-03 |
| 14 | GO:0005884: actin filament | 5.45E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 6.95E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 7.69E-03 |
| 17 | GO:0030136: clathrin-coated vesicle | 1.30E-02 |
| 18 | GO:0005770: late endosome | 1.45E-02 |
| 19 | GO:0009523: photosystem II | 1.60E-02 |
| 20 | GO:0000785: chromatin | 1.76E-02 |
| 21 | GO:0000932: P-body | 2.18E-02 |
| 22 | GO:0009534: chloroplast thylakoid | 2.61E-02 |
| 23 | GO:0000151: ubiquitin ligase complex | 2.64E-02 |
| 24 | GO:0019005: SCF ubiquitin ligase complex | 2.64E-02 |
| 25 | GO:0009506: plasmodesma | 2.96E-02 |
| 26 | GO:0000786: nucleosome | 3.02E-02 |
| 27 | GO:0031969: chloroplast membrane | 3.05E-02 |
| 28 | GO:0031201: SNARE complex | 3.53E-02 |
| 29 | GO:0031977: thylakoid lumen | 3.53E-02 |
| 30 | GO:0005634: nucleus | 3.76E-02 |
| 31 | GO:0031966: mitochondrial membrane | 4.40E-02 |