co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
2	GO:0046677: response to antibiotic	0.00E+00
3	GO:0009661: chromoplast organization	0.00E+00
4	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
5	GO:0050821: protein stabilization	3.96E-06
6	GO:0010206: photosystem II repair	6.60E-06
7	GO:0018107: peptidyl-threonine phosphorylation	1.71E-05
8	GO:0042548: regulation of photosynthesis, light reaction	4.85E-05
9	GO:0050992: dimethylallyl diphosphate biosynthetic process	4.85E-05
10	GO:1904143: positive regulation of carotenoid biosynthetic process	4.85E-05
11	GO:0048575: short-day photoperiodism, flowering	8.61E-05
12	GO:0015995: chlorophyll biosynthetic process	1.54E-04
13	GO:0016120: carotene biosynthetic process	2.30E-04
14	GO:0016123: xanthophyll biosynthetic process	2.30E-04
15	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.85E-04
16	GO:0009643: photosynthetic acclimation	2.85E-04
17	GO:0010114: response to red light	2.87E-04
18	GO:0005978: glycogen biosynthetic process	4.64E-04
19	GO:0010100: negative regulation of photomorphogenesis	5.27E-04
20	GO:0018105: peptidyl-serine phosphorylation	5.60E-04
21	GO:0055114: oxidation-reduction process	6.51E-04
22	GO:0009688: abscisic acid biosynthetic process	7.30E-04
23	GO:0030148: sphingolipid biosynthetic process	8.02E-04
24	GO:0007623: circadian rhythm	9.17E-04
25	GO:2000028: regulation of photoperiodism, flowering	9.49E-04
26	GO:0009658: chloroplast organization	1.39E-03
27	GO:0010017: red or far-red light signaling pathway	1.52E-03
28	GO:0070417: cellular response to cold	1.80E-03
29	GO:0044550: secondary metabolite biosynthetic process	1.85E-03
30	GO:0006606: protein import into nucleus	1.89E-03
31	GO:0010182: sugar mediated signaling pathway	1.99E-03
32	GO:0019252: starch biosynthetic process	2.19E-03
33	GO:0030163: protein catabolic process	2.50E-03
34	GO:0006629: lipid metabolic process	2.50E-03
35	GO:0016311: dephosphorylation	3.40E-03
36	GO:0010218: response to far red light	3.76E-03
37	GO:0007568: aging	3.88E-03
38	GO:0009637: response to blue light	4.13E-03
39	GO:0035556: intracellular signal transduction	4.65E-03
40	GO:0009640: photomorphogenesis	4.91E-03
41	GO:0006855: drug transmembrane transport	5.46E-03
42	GO:0009585: red, far-red light phototransduction	6.02E-03
43	GO:0009624: response to nematode	7.69E-03
44	GO:0007166: cell surface receptor signaling pathway	1.24E-02
45	GO:0006810: transport	1.31E-02
46	GO:0006970: response to osmotic stress	1.62E-02
47	GO:0006468: protein phosphorylation	1.67E-02
48	GO:0009723: response to ethylene	1.70E-02
49	GO:0015979: photosynthesis	1.97E-02
50	GO:0032259: methylation	2.29E-02
51	GO:0009408: response to heat	2.36E-02
52	GO:0009735: response to cytokinin	3.33E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
3	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
4	GO:0052631: sphingolipid delta-8 desaturase activity	1.87E-05
5	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.87E-05
6	GO:0010277: chlorophyllide a oxygenase [overall] activity	8.61E-05
7	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.78E-04
8	GO:0051538: 3 iron, 4 sulfur cluster binding	2.30E-04
9	GO:0071949: FAD binding	5.93E-04
10	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	7.30E-04
11	GO:0004022: alcohol dehydrogenase (NAD) activity	9.49E-04
12	GO:0005524: ATP binding	1.85E-03
13	GO:0004674: protein serine/threonine kinase activity	1.88E-03
14	GO:0004672: protein kinase activity	2.04E-03
15	GO:0008236: serine-type peptidase activity	3.40E-03
16	GO:0015238: drug transmembrane transporter activity	3.63E-03
17	GO:0003993: acid phosphatase activity	4.26E-03
18	GO:0051537: 2 iron, 2 sulfur cluster binding	5.18E-03
19	GO:0016298: lipase activity	6.17E-03
20	GO:0016874: ligase activity	7.38E-03
21	GO:0005506: iron ion binding	8.75E-03
22	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.16E-03
23	GO:0016829: lyase activity	9.51E-03
24	GO:0004252: serine-type endopeptidase activity	9.68E-03
25	GO:0005215: transporter activity	9.84E-03
26	GO:0008565: protein transporter activity	1.02E-02
27	GO:0015297: antiporter activity	1.09E-02
28	GO:0016301: kinase activity	1.21E-02
29	GO:0042802: identical protein binding	1.34E-02
30	GO:0008168: methyltransferase activity	1.50E-02
31	GO:0004871: signal transducer activity	2.10E-02
32	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.15E-02
33	GO:0016887: ATPase activity	3.23E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	3.01E-07
2	GO:0009507: chloroplast	8.87E-07
3	GO:0009706: chloroplast inner membrane	2.39E-05
4	GO:0042651: thylakoid membrane	3.37E-05
5	GO:0016605: PML body	8.61E-05
6	GO:0031977: thylakoid lumen	2.64E-04
7	GO:0009941: chloroplast envelope	3.26E-04
8	GO:0016604: nuclear body	6.61E-04
9	GO:0009534: chloroplast thylakoid	6.67E-04
10	GO:0009543: chloroplast thylakoid lumen	6.76E-04
11	GO:0031969: chloroplast membrane	1.71E-03
12	GO:0009570: chloroplast stroma	2.90E-03
13	GO:0009579: thylakoid	5.26E-03
14	GO:0016607: nuclear speck	6.91E-03
15	GO:0005834: heterotrimeric G-protein complex	7.07E-03
16	GO:0005622: intracellular	7.80E-03
17	GO:0010287: plastoglobule	8.66E-03
18	GO:0009536: plastid	1.09E-02
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.64E-02