GO Enrichment Analysis of Co-expressed Genes with
AT1G22540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 8 | GO:0046677: response to antibiotic | 0.00E+00 |
| 9 | GO:0015979: photosynthesis | 5.67E-11 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 3.17E-09 |
| 11 | GO:0016122: xanthophyll metabolic process | 7.96E-07 |
| 12 | GO:0010028: xanthophyll cycle | 1.25E-04 |
| 13 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.25E-04 |
| 14 | GO:0006824: cobalt ion transport | 1.25E-04 |
| 15 | GO:1901679: nucleotide transmembrane transport | 2.90E-04 |
| 16 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 2.90E-04 |
| 17 | GO:0051262: protein tetramerization | 2.90E-04 |
| 18 | GO:0034755: iron ion transmembrane transport | 2.90E-04 |
| 19 | GO:0009640: photomorphogenesis | 3.42E-04 |
| 20 | GO:0080121: AMP transport | 4.78E-04 |
| 21 | GO:0051639: actin filament network formation | 6.85E-04 |
| 22 | GO:0010306: rhamnogalacturonan II biosynthetic process | 6.85E-04 |
| 23 | GO:0051764: actin crosslink formation | 9.08E-04 |
| 24 | GO:0009765: photosynthesis, light harvesting | 9.08E-04 |
| 25 | GO:0015994: chlorophyll metabolic process | 9.08E-04 |
| 26 | GO:0015867: ATP transport | 9.08E-04 |
| 27 | GO:0006629: lipid metabolic process | 1.08E-03 |
| 28 | GO:0010117: photoprotection | 1.15E-03 |
| 29 | GO:0055114: oxidation-reduction process | 1.22E-03 |
| 30 | GO:0015866: ADP transport | 1.41E-03 |
| 31 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.41E-03 |
| 32 | GO:0035435: phosphate ion transmembrane transport | 1.41E-03 |
| 33 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.41E-03 |
| 34 | GO:0009942: longitudinal axis specification | 1.68E-03 |
| 35 | GO:0098655: cation transmembrane transport | 1.68E-03 |
| 36 | GO:0010189: vitamin E biosynthetic process | 1.68E-03 |
| 37 | GO:0071470: cellular response to osmotic stress | 1.68E-03 |
| 38 | GO:0045926: negative regulation of growth | 1.68E-03 |
| 39 | GO:0009645: response to low light intensity stimulus | 1.98E-03 |
| 40 | GO:0080186: developmental vegetative growth | 1.98E-03 |
| 41 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.98E-03 |
| 42 | GO:0050829: defense response to Gram-negative bacterium | 1.98E-03 |
| 43 | GO:0009642: response to light intensity | 2.29E-03 |
| 44 | GO:0034599: cellular response to oxidative stress | 2.54E-03 |
| 45 | GO:0007389: pattern specification process | 2.61E-03 |
| 46 | GO:0007186: G-protein coupled receptor signaling pathway | 2.61E-03 |
| 47 | GO:0009657: plastid organization | 2.61E-03 |
| 48 | GO:0048574: long-day photoperiodism, flowering | 2.61E-03 |
| 49 | GO:0098656: anion transmembrane transport | 2.95E-03 |
| 50 | GO:0048507: meristem development | 2.95E-03 |
| 51 | GO:0010114: response to red light | 3.12E-03 |
| 52 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.31E-03 |
| 53 | GO:1900865: chloroplast RNA modification | 3.31E-03 |
| 54 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.31E-03 |
| 55 | GO:0009688: abscisic acid biosynthetic process | 3.68E-03 |
| 56 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.68E-03 |
| 57 | GO:0043085: positive regulation of catalytic activity | 4.06E-03 |
| 58 | GO:0030148: sphingolipid biosynthetic process | 4.06E-03 |
| 59 | GO:0009698: phenylpropanoid metabolic process | 4.06E-03 |
| 60 | GO:0009773: photosynthetic electron transport in photosystem I | 4.06E-03 |
| 61 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.45E-03 |
| 62 | GO:0006094: gluconeogenesis | 4.86E-03 |
| 63 | GO:0030048: actin filament-based movement | 4.86E-03 |
| 64 | GO:0009740: gibberellic acid mediated signaling pathway | 5.61E-03 |
| 65 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.15E-03 |
| 66 | GO:0009742: brassinosteroid mediated signaling pathway | 6.32E-03 |
| 67 | GO:0051017: actin filament bundle assembly | 6.61E-03 |
| 68 | GO:0006289: nucleotide-excision repair | 6.61E-03 |
| 69 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.08E-03 |
| 70 | GO:0006874: cellular calcium ion homeostasis | 7.08E-03 |
| 71 | GO:0007017: microtubule-based process | 7.08E-03 |
| 72 | GO:0009269: response to desiccation | 7.56E-03 |
| 73 | GO:0009686: gibberellin biosynthetic process | 8.56E-03 |
| 74 | GO:0070417: cellular response to cold | 9.60E-03 |
| 75 | GO:0006662: glycerol ether metabolic process | 1.07E-02 |
| 76 | GO:0048868: pollen tube development | 1.07E-02 |
| 77 | GO:0009741: response to brassinosteroid | 1.07E-02 |
| 78 | GO:0010305: leaf vascular tissue pattern formation | 1.07E-02 |
| 79 | GO:0007018: microtubule-based movement | 1.12E-02 |
| 80 | GO:0008654: phospholipid biosynthetic process | 1.18E-02 |
| 81 | GO:0007166: cell surface receptor signaling pathway | 1.18E-02 |
| 82 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.24E-02 |
| 83 | GO:0010193: response to ozone | 1.24E-02 |
| 84 | GO:0010583: response to cyclopentenone | 1.30E-02 |
| 85 | GO:1901657: glycosyl compound metabolic process | 1.36E-02 |
| 86 | GO:0010252: auxin homeostasis | 1.42E-02 |
| 87 | GO:0071805: potassium ion transmembrane transport | 1.48E-02 |
| 88 | GO:0009723: response to ethylene | 1.85E-02 |
| 89 | GO:0018298: protein-chromophore linkage | 1.94E-02 |
| 90 | GO:0010218: response to far red light | 2.08E-02 |
| 91 | GO:0006811: ion transport | 2.08E-02 |
| 92 | GO:0007568: aging | 2.15E-02 |
| 93 | GO:0009910: negative regulation of flower development | 2.15E-02 |
| 94 | GO:0009637: response to blue light | 2.30E-02 |
| 95 | GO:0045454: cell redox homeostasis | 2.38E-02 |
| 96 | GO:0006839: mitochondrial transport | 2.52E-02 |
| 97 | GO:0006631: fatty acid metabolic process | 2.60E-02 |
| 98 | GO:0009926: auxin polar transport | 2.75E-02 |
| 99 | GO:0009644: response to high light intensity | 2.91E-02 |
| 100 | GO:0048364: root development | 3.06E-02 |
| 101 | GO:0006812: cation transport | 3.24E-02 |
| 102 | GO:0006486: protein glycosylation | 3.40E-02 |
| 103 | GO:0006813: potassium ion transport | 3.40E-02 |
| 104 | GO:0010224: response to UV-B | 3.49E-02 |
| 105 | GO:0006417: regulation of translation | 3.66E-02 |
| 106 | GO:0006096: glycolytic process | 3.83E-02 |
| 107 | GO:0043086: negative regulation of catalytic activity | 3.83E-02 |
| 108 | GO:0006508: proteolysis | 3.98E-02 |
| 109 | GO:0042545: cell wall modification | 4.28E-02 |
| 110 | GO:0006396: RNA processing | 4.47E-02 |
| 111 | GO:0009735: response to cytokinin | 4.73E-02 |
| 112 | GO:0005975: carbohydrate metabolic process | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 2 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 3 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 4 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 5 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 6 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 7 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 8 | GO:0004462: lactoylglutathione lyase activity | 3.28E-05 |
| 9 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.25E-04 |
| 10 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 1.25E-04 |
| 11 | GO:0005227: calcium activated cation channel activity | 1.25E-04 |
| 12 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.25E-04 |
| 13 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.25E-04 |
| 14 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.25E-04 |
| 15 | GO:0019172: glyoxalase III activity | 2.90E-04 |
| 16 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 2.90E-04 |
| 17 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.90E-04 |
| 18 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 2.90E-04 |
| 19 | GO:0016630: protochlorophyllide reductase activity | 2.90E-04 |
| 20 | GO:0016805: dipeptidase activity | 4.78E-04 |
| 21 | GO:0004180: carboxypeptidase activity | 4.78E-04 |
| 22 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.78E-04 |
| 23 | GO:0019201: nucleotide kinase activity | 6.85E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.85E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 6.85E-04 |
| 26 | GO:0004930: G-protein coupled receptor activity | 9.08E-04 |
| 27 | GO:0070628: proteasome binding | 9.08E-04 |
| 28 | GO:0009011: starch synthase activity | 9.08E-04 |
| 29 | GO:0019901: protein kinase binding | 9.76E-04 |
| 30 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.15E-03 |
| 31 | GO:0080122: AMP transmembrane transporter activity | 1.15E-03 |
| 32 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.41E-03 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 1.41E-03 |
| 34 | GO:0031593: polyubiquitin binding | 1.41E-03 |
| 35 | GO:0004602: glutathione peroxidase activity | 1.68E-03 |
| 36 | GO:0005347: ATP transmembrane transporter activity | 1.68E-03 |
| 37 | GO:0015217: ADP transmembrane transporter activity | 1.68E-03 |
| 38 | GO:0005261: cation channel activity | 1.68E-03 |
| 39 | GO:0004017: adenylate kinase activity | 1.68E-03 |
| 40 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.61E-03 |
| 41 | GO:0005381: iron ion transmembrane transporter activity | 3.31E-03 |
| 42 | GO:0009672: auxin:proton symporter activity | 3.31E-03 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.37E-03 |
| 44 | GO:0008047: enzyme activator activity | 3.68E-03 |
| 45 | GO:0047372: acylglycerol lipase activity | 4.06E-03 |
| 46 | GO:0008081: phosphoric diester hydrolase activity | 4.86E-03 |
| 47 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.86E-03 |
| 48 | GO:0015114: phosphate ion transmembrane transporter activity | 4.86E-03 |
| 49 | GO:0010329: auxin efflux transmembrane transporter activity | 4.86E-03 |
| 50 | GO:0003774: motor activity | 5.28E-03 |
| 51 | GO:0004970: ionotropic glutamate receptor activity | 5.71E-03 |
| 52 | GO:0004190: aspartic-type endopeptidase activity | 5.71E-03 |
| 53 | GO:0005217: intracellular ligand-gated ion channel activity | 5.71E-03 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 6.13E-03 |
| 55 | GO:0031409: pigment binding | 6.15E-03 |
| 56 | GO:0043130: ubiquitin binding | 6.61E-03 |
| 57 | GO:0015079: potassium ion transmembrane transporter activity | 7.08E-03 |
| 58 | GO:0005216: ion channel activity | 7.08E-03 |
| 59 | GO:0008289: lipid binding | 8.75E-03 |
| 60 | GO:0003727: single-stranded RNA binding | 9.07E-03 |
| 61 | GO:0047134: protein-disulfide reductase activity | 9.60E-03 |
| 62 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 9.60E-03 |
| 63 | GO:0046910: pectinesterase inhibitor activity | 9.60E-03 |
| 64 | GO:0008536: Ran GTPase binding | 1.07E-02 |
| 65 | GO:0004791: thioredoxin-disulfide reductase activity | 1.12E-02 |
| 66 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.36E-02 |
| 67 | GO:0051015: actin filament binding | 1.36E-02 |
| 68 | GO:0003684: damaged DNA binding | 1.42E-02 |
| 69 | GO:0005200: structural constituent of cytoskeleton | 1.48E-02 |
| 70 | GO:0016168: chlorophyll binding | 1.67E-02 |
| 71 | GO:0102483: scopolin beta-glucosidase activity | 1.81E-02 |
| 72 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.94E-02 |
| 73 | GO:0005515: protein binding | 1.94E-02 |
| 74 | GO:0046872: metal ion binding | 2.43E-02 |
| 75 | GO:0008422: beta-glucosidase activity | 2.45E-02 |
| 76 | GO:0004185: serine-type carboxypeptidase activity | 2.75E-02 |
| 77 | GO:0043621: protein self-association | 2.91E-02 |
| 78 | GO:0004519: endonuclease activity | 3.19E-02 |
| 79 | GO:0005215: transporter activity | 3.29E-02 |
| 80 | GO:0003777: microtubule motor activity | 3.66E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 3.66E-02 |
| 82 | GO:0016491: oxidoreductase activity | 4.07E-02 |
| 83 | GO:0030599: pectinesterase activity | 4.19E-02 |
| 84 | GO:0003779: actin binding | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 2.68E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.27E-17 |
| 4 | GO:0009507: chloroplast | 1.36E-14 |
| 5 | GO:0009941: chloroplast envelope | 3.47E-08 |
| 6 | GO:0009538: photosystem I reaction center | 9.09E-07 |
| 7 | GO:0009570: chloroplast stroma | 1.07E-05 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 1.33E-05 |
| 9 | GO:0009579: thylakoid | 1.80E-05 |
| 10 | GO:0009522: photosystem I | 5.59E-05 |
| 11 | GO:0010287: plastoglobule | 1.11E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 1.23E-04 |
| 13 | GO:0030093: chloroplast photosystem I | 2.90E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 3.14E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 4.78E-04 |
| 16 | GO:0042646: plastid nucleoid | 6.85E-04 |
| 17 | GO:0032432: actin filament bundle | 6.85E-04 |
| 18 | GO:0009706: chloroplast inner membrane | 7.83E-04 |
| 19 | GO:0030660: Golgi-associated vesicle membrane | 9.08E-04 |
| 20 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 9.08E-04 |
| 21 | GO:0016363: nuclear matrix | 1.68E-03 |
| 22 | GO:0016021: integral component of membrane | 2.00E-03 |
| 23 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.29E-03 |
| 24 | GO:0031977: thylakoid lumen | 2.88E-03 |
| 25 | GO:0045298: tubulin complex | 2.95E-03 |
| 26 | GO:0031969: chloroplast membrane | 3.51E-03 |
| 27 | GO:0016459: myosin complex | 3.68E-03 |
| 28 | GO:0005765: lysosomal membrane | 4.06E-03 |
| 29 | GO:0005884: actin filament | 4.06E-03 |
| 30 | GO:0030076: light-harvesting complex | 5.71E-03 |
| 31 | GO:0042651: thylakoid membrane | 7.08E-03 |
| 32 | GO:0005871: kinesin complex | 9.60E-03 |
| 33 | GO:0009523: photosystem II | 1.18E-02 |
| 34 | GO:0071944: cell periphery | 1.36E-02 |
| 35 | GO:0005789: endoplasmic reticulum membrane | 1.42E-02 |
| 36 | GO:0005874: microtubule | 1.92E-02 |
| 37 | GO:0009707: chloroplast outer membrane | 1.94E-02 |
| 38 | GO:0016020: membrane | 3.13E-02 |
| 39 | GO:0010008: endosome membrane | 3.92E-02 |