Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0034976: response to endoplasmic reticulum stress2.38E-08
3GO:0009651: response to salt stress2.44E-08
4GO:0006099: tricarboxylic acid cycle3.86E-08
5GO:0006564: L-serine biosynthetic process6.77E-06
6GO:0006457: protein folding1.51E-05
7GO:0046686: response to cadmium ion1.89E-05
8GO:1900424: regulation of defense response to bacterium6.26E-05
9GO:0034975: protein folding in endoplasmic reticulum6.26E-05
10GO:0019510: S-adenosylhomocysteine catabolic process6.26E-05
11GO:0015760: glucose-6-phosphate transport6.26E-05
12GO:0033353: S-adenosylmethionine cycle1.52E-04
13GO:0015865: purine nucleotide transport1.52E-04
14GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine1.52E-04
15GO:0051262: protein tetramerization1.52E-04
16GO:0015712: hexose phosphate transport1.52E-04
17GO:1900140: regulation of seedling development2.57E-04
18GO:0035436: triose phosphate transmembrane transport2.57E-04
19GO:0015714: phosphoenolpyruvate transport2.57E-04
20GO:0046902: regulation of mitochondrial membrane permeability3.73E-04
21GO:0030163: protein catabolic process4.86E-04
22GO:0006346: methylation-dependent chromatin silencing4.99E-04
23GO:0010109: regulation of photosynthesis4.99E-04
24GO:0060548: negative regulation of cell death4.99E-04
25GO:0045727: positive regulation of translation4.99E-04
26GO:1902584: positive regulation of response to water deprivation4.99E-04
27GO:0033356: UDP-L-arabinose metabolic process4.99E-04
28GO:0015713: phosphoglycerate transport4.99E-04
29GO:0009409: response to cold6.00E-04
30GO:0045927: positive regulation of growth6.32E-04
31GO:0009627: systemic acquired resistance6.80E-04
32GO:0006810: transport6.92E-04
33GO:0006796: phosphate-containing compound metabolic process7.73E-04
34GO:0009643: photosynthetic acclimation7.73E-04
35GO:0010043: response to zinc ion9.06E-04
36GO:0015977: carbon fixation9.20E-04
37GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.20E-04
38GO:0034389: lipid particle organization9.20E-04
39GO:0006511: ubiquitin-dependent protein catabolic process9.87E-04
40GO:0080186: developmental vegetative growth1.07E-03
41GO:0071669: plant-type cell wall organization or biogenesis1.07E-03
42GO:0080167: response to karrikin1.08E-03
43GO:0031540: regulation of anthocyanin biosynthetic process1.24E-03
44GO:0006102: isocitrate metabolic process1.24E-03
45GO:0045454: cell redox homeostasis1.35E-03
46GO:0009644: response to high light intensity1.36E-03
47GO:0010262: somatic embryogenesis1.41E-03
48GO:0010497: plasmodesmata-mediated intercellular transport1.41E-03
49GO:0046685: response to arsenic-containing substance1.58E-03
50GO:0006098: pentose-phosphate shunt1.58E-03
51GO:0010224: response to UV-B1.73E-03
52GO:0009408: response to heat1.76E-03
53GO:0010205: photoinhibition1.77E-03
54GO:0043067: regulation of programmed cell death1.77E-03
55GO:2000280: regulation of root development1.77E-03
56GO:0006979: response to oxidative stress1.82E-03
57GO:0006032: chitin catabolic process1.96E-03
58GO:0016441: posttranscriptional gene silencing1.96E-03
59GO:0006096: glycolytic process1.98E-03
60GO:0000272: polysaccharide catabolic process2.17E-03
61GO:0006816: calcium ion transport2.17E-03
62GO:0009807: lignan biosynthetic process2.17E-03
63GO:0015706: nitrate transport2.37E-03
64GO:0010075: regulation of meristem growth2.58E-03
65GO:0006094: gluconeogenesis2.58E-03
66GO:0006807: nitrogen compound metabolic process2.58E-03
67GO:0009934: regulation of meristem structural organization2.80E-03
68GO:0070588: calcium ion transmembrane transport3.03E-03
69GO:0042343: indole glucosinolate metabolic process3.03E-03
70GO:0010167: response to nitrate3.03E-03
71GO:0000027: ribosomal large subunit assembly3.49E-03
72GO:0009555: pollen development3.63E-03
73GO:0016998: cell wall macromolecule catabolic process3.98E-03
74GO:0098542: defense response to other organism3.98E-03
75GO:0006730: one-carbon metabolic process4.24E-03
76GO:0009306: protein secretion4.76E-03
77GO:0009561: megagametogenesis4.76E-03
78GO:0006817: phosphate ion transport4.76E-03
79GO:0009749: response to glucose6.17E-03
80GO:0010183: pollen tube guidance6.17E-03
81GO:0032502: developmental process6.76E-03
82GO:0007264: small GTPase mediated signal transduction6.76E-03
83GO:0006464: cellular protein modification process7.38E-03
84GO:0016579: protein deubiquitination8.02E-03
85GO:0055114: oxidation-reduction process8.27E-03
86GO:0009615: response to virus8.35E-03
87GO:0044550: secondary metabolite biosynthetic process8.45E-03
88GO:0009816: defense response to bacterium, incompatible interaction8.68E-03
89GO:0015979: photosynthesis8.87E-03
90GO:0042128: nitrate assimilation9.01E-03
91GO:0030244: cellulose biosynthetic process1.01E-02
92GO:0008219: cell death1.01E-02
93GO:0009832: plant-type cell wall biogenesis1.04E-02
94GO:0006499: N-terminal protein myristoylation1.08E-02
95GO:0006468: protein phosphorylation1.25E-02
96GO:0006839: mitochondrial transport1.30E-02
97GO:0009744: response to sucrose1.42E-02
98GO:0051707: response to other organism1.42E-02
99GO:0009909: regulation of flower development1.89E-02
100GO:0048316: seed development2.02E-02
101GO:0009626: plant-type hypersensitive response2.07E-02
102GO:0009611: response to wounding2.09E-02
103GO:0009624: response to nematode2.25E-02
104GO:0009737: response to abscisic acid2.31E-02
105GO:0009742: brassinosteroid mediated signaling pathway2.35E-02
106GO:0055085: transmembrane transport2.60E-02
107GO:0009058: biosynthetic process2.75E-02
108GO:0009845: seed germination2.80E-02
109GO:0009790: embryo development2.95E-02
110GO:0016036: cellular response to phosphate starvation3.17E-02
111GO:0010150: leaf senescence3.33E-02
112GO:0009739: response to gibberellin3.60E-02
113GO:0007166: cell surface receptor signaling pathway3.66E-02
114GO:0009617: response to bacterium3.77E-02
115GO:0030154: cell differentiation4.49E-02
116GO:0009860: pollen tube growth4.78E-02
RankGO TermAdjusted P value
1GO:0003756: protein disulfide isomerase activity9.13E-08
2GO:0004617: phosphoglycerate dehydrogenase activity2.26E-07
3GO:0051287: NAD binding5.03E-06
4GO:0005507: copper ion binding1.95E-05
5GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity6.26E-05
6GO:0004013: adenosylhomocysteinase activity6.26E-05
7GO:0005315: inorganic phosphate transmembrane transporter activity1.03E-04
8GO:0015114: phosphate ion transmembrane transporter activity1.03E-04
9GO:0005388: calcium-transporting ATPase activity1.03E-04
10GO:0004338: glucan exo-1,3-beta-glucosidase activity1.52E-04
11GO:0004776: succinate-CoA ligase (GDP-forming) activity1.52E-04
12GO:0004634: phosphopyruvate hydratase activity1.52E-04
13GO:0015152: glucose-6-phosphate transmembrane transporter activity1.52E-04
14GO:0004775: succinate-CoA ligase (ADP-forming) activity1.52E-04
15GO:0052691: UDP-arabinopyranose mutase activity1.52E-04
16GO:0004298: threonine-type endopeptidase activity2.08E-04
17GO:0071917: triose-phosphate transmembrane transporter activity2.57E-04
18GO:0008964: phosphoenolpyruvate carboxylase activity2.57E-04
19GO:0004108: citrate (Si)-synthase activity3.73E-04
20GO:0004449: isocitrate dehydrogenase (NAD+) activity3.73E-04
21GO:0015120: phosphoglycerate transmembrane transporter activity4.99E-04
22GO:0016866: intramolecular transferase activity4.99E-04
23GO:0005524: ATP binding5.05E-04
24GO:0016597: amino acid binding5.78E-04
25GO:0005471: ATP:ADP antiporter activity6.32E-04
26GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity7.73E-04
27GO:0016462: pyrophosphatase activity7.73E-04
28GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity7.73E-04
29GO:0004332: fructose-bisphosphate aldolase activity7.73E-04
30GO:0000287: magnesium ion binding8.14E-04
31GO:0004427: inorganic diphosphatase activity1.07E-03
32GO:0008121: ubiquinol-cytochrome-c reductase activity1.07E-03
33GO:0004714: transmembrane receptor protein tyrosine kinase activity1.24E-03
34GO:0015112: nitrate transmembrane transporter activity1.77E-03
35GO:0004568: chitinase activity1.96E-03
36GO:0051082: unfolded protein binding2.37E-03
37GO:0005262: calcium channel activity2.58E-03
38GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.80E-03
39GO:0008061: chitin binding3.03E-03
40GO:0003712: transcription cofactor activity3.03E-03
41GO:0004725: protein tyrosine phosphatase activity3.26E-03
42GO:0033612: receptor serine/threonine kinase binding3.98E-03
43GO:0036459: thiol-dependent ubiquitinyl hydrolase activity3.98E-03
44GO:0008810: cellulase activity4.50E-03
45GO:0016760: cellulose synthase (UDP-forming) activity4.50E-03
46GO:0022891: substrate-specific transmembrane transporter activity4.50E-03
47GO:0004674: protein serine/threonine kinase activity5.71E-03
48GO:0005516: calmodulin binding6.09E-03
49GO:0004843: thiol-dependent ubiquitin-specific protease activity6.46E-03
50GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.07E-03
51GO:0008233: peptidase activity7.64E-03
52GO:0008237: metallopeptidase activity7.70E-03
53GO:0004721: phosphoprotein phosphatase activity9.36E-03
54GO:0004806: triglyceride lipase activity9.36E-03
55GO:0030247: polysaccharide binding9.36E-03
56GO:0005215: transporter activity1.01E-02
57GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.01E-02
58GO:0030145: manganese ion binding1.11E-02
59GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.11E-02
60GO:0004672: protein kinase activity1.45E-02
61GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
62GO:0015293: symporter activity1.54E-02
63GO:0016887: ATPase activity1.79E-02
64GO:0045735: nutrient reservoir activity1.98E-02
65GO:0080043: quercetin 3-O-glucosyltransferase activity2.11E-02
66GO:0080044: quercetin 7-O-glucosyltransferase activity2.11E-02
67GO:0015035: protein disulfide oxidoreductase activity2.30E-02
68GO:0016746: transferase activity, transferring acyl groups2.30E-02
69GO:0016758: transferase activity, transferring hexosyl groups2.60E-02
70GO:0030246: carbohydrate binding2.75E-02
71GO:0030170: pyridoxal phosphate binding2.85E-02
72GO:0019825: oxygen binding2.91E-02
73GO:0015144: carbohydrate transmembrane transporter activity3.01E-02
74GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.17E-02
75GO:0015297: antiporter activity3.22E-02
76GO:0005351: sugar:proton symporter activity3.27E-02
77GO:0005515: protein binding3.47E-02
78GO:0008194: UDP-glycosyltransferase activity3.60E-02
79GO:0005506: iron ion binding4.07E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005788: endoplasmic reticulum lumen1.07E-10
3GO:0005783: endoplasmic reticulum9.34E-09
4GO:0005774: vacuolar membrane2.86E-08
5GO:0048046: apoplast3.67E-08
6GO:0005773: vacuole2.43E-07
7GO:0005618: cell wall6.32E-07
8GO:0005740: mitochondrial envelope6.70E-07
9GO:0005886: plasma membrane1.39E-05
10GO:0019773: proteasome core complex, alpha-subunit complex3.49E-05
11GO:0000138: Golgi trans cisterna6.26E-05
12GO:0045252: oxoglutarate dehydrogenase complex6.26E-05
13GO:0016020: membrane8.41E-05
14GO:0009506: plasmodesma8.62E-05
15GO:0005829: cytosol1.29E-04
16GO:0000502: proteasome complex1.45E-04
17GO:0000015: phosphopyruvate hydratase complex1.52E-04
18GO:0009507: chloroplast1.53E-04
19GO:0005741: mitochondrial outer membrane2.08E-04
20GO:0005839: proteasome core complex2.08E-04
21GO:0022626: cytosolic ribosome5.83E-04
22GO:0005811: lipid particle1.41E-03
23GO:0000326: protein storage vacuole1.41E-03
24GO:0008541: proteasome regulatory particle, lid subcomplex2.17E-03
25GO:0005750: mitochondrial respiratory chain complex III2.80E-03
26GO:0005795: Golgi stack3.03E-03
27GO:0016592: mediator complex6.76E-03
28GO:0005743: mitochondrial inner membrane1.07E-02
29GO:0090406: pollen tube1.42E-02
30GO:0005739: mitochondrion1.44E-02
31GO:0005887: integral component of plasma membrane1.56E-02
32GO:0005794: Golgi apparatus1.93E-02
33GO:0009706: chloroplast inner membrane2.25E-02
34GO:0005759: mitochondrial matrix3.11E-02
35GO:0005622: intracellular3.63E-02
36GO:0046658: anchored component of plasma membrane4.06E-02
Gene type



Gene DE type