Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G21750

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0009617: response to bacterium2.71E-09
6GO:0006099: tricarboxylic acid cycle1.19E-07
7GO:0046686: response to cadmium ion3.80E-07
8GO:0006564: L-serine biosynthetic process3.96E-07
9GO:0009627: systemic acquired resistance2.76E-05
10GO:0060548: negative regulation of cell death3.29E-05
11GO:0070588: calcium ion transmembrane transport3.72E-05
12GO:0009697: salicylic acid biosynthetic process5.28E-05
13GO:0071456: cellular response to hypoxia8.18E-05
14GO:0051707: response to other organism9.57E-05
15GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.08E-04
16GO:0042742: defense response to bacterium1.25E-04
17GO:0055114: oxidation-reduction process1.26E-04
18GO:0006979: response to oxidative stress1.28E-04
19GO:0006102: isocitrate metabolic process1.82E-04
20GO:0080120: CAAX-box protein maturation2.13E-04
21GO:0034975: protein folding in endoplasmic reticulum2.13E-04
22GO:0071586: CAAX-box protein processing2.13E-04
23GO:0006805: xenobiotic metabolic process2.13E-04
24GO:0015760: glucose-6-phosphate transport2.13E-04
25GO:1990641: response to iron ion starvation2.13E-04
26GO:0080173: male-female gamete recognition during double fertilization2.13E-04
27GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.13E-04
28GO:0055081: anion homeostasis2.13E-04
29GO:0009700: indole phytoalexin biosynthetic process2.13E-04
30GO:0010230: alternative respiration2.13E-04
31GO:0010120: camalexin biosynthetic process2.25E-04
32GO:0010112: regulation of systemic acquired resistance2.74E-04
33GO:0009615: response to virus3.33E-04
34GO:0080167: response to karrikin3.62E-04
35GO:0009682: induced systemic resistance4.43E-04
36GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.76E-04
37GO:0051262: protein tetramerization4.76E-04
38GO:0019521: D-gluconate metabolic process4.76E-04
39GO:0019374: galactolipid metabolic process4.76E-04
40GO:0006101: citrate metabolic process4.76E-04
41GO:0015865: purine nucleotide transport4.76E-04
42GO:0031349: positive regulation of defense response4.76E-04
43GO:0015712: hexose phosphate transport4.76E-04
44GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.76E-04
45GO:0015706: nitrate transport5.07E-04
46GO:0010272: response to silver ion7.74E-04
47GO:0045039: protein import into mitochondrial inner membrane7.74E-04
48GO:0015714: phosphoenolpyruvate transport7.74E-04
49GO:1900140: regulation of seedling development7.74E-04
50GO:0080055: low-affinity nitrate transport7.74E-04
51GO:0035436: triose phosphate transmembrane transport7.74E-04
52GO:0034976: response to endoplasmic reticulum stress8.05E-04
53GO:0009636: response to toxic substance1.01E-03
54GO:0001676: long-chain fatty acid metabolic process1.10E-03
55GO:0010116: positive regulation of abscisic acid biosynthetic process1.10E-03
56GO:0048194: Golgi vesicle budding1.10E-03
57GO:0046902: regulation of mitochondrial membrane permeability1.10E-03
58GO:0033014: tetrapyrrole biosynthetic process1.10E-03
59GO:0031348: negative regulation of defense response1.17E-03
60GO:1901141: regulation of lignin biosynthetic process1.47E-03
61GO:0010109: regulation of photosynthesis1.47E-03
62GO:0033356: UDP-L-arabinose metabolic process1.47E-03
63GO:0051205: protein insertion into membrane1.47E-03
64GO:0015713: phosphoglycerate transport1.47E-03
65GO:0080142: regulation of salicylic acid biosynthetic process1.47E-03
66GO:0006097: glyoxylate cycle1.87E-03
67GO:0006461: protein complex assembly1.87E-03
68GO:0030041: actin filament polymerization1.87E-03
69GO:0018279: protein N-linked glycosylation via asparagine1.87E-03
70GO:0044550: secondary metabolite biosynthetic process2.10E-03
71GO:0006751: glutathione catabolic process2.31E-03
72GO:0007035: vacuolar acidification2.31E-03
73GO:0009643: photosynthetic acclimation2.31E-03
74GO:0045454: cell redox homeostasis2.43E-03
75GO:0015977: carbon fixation2.77E-03
76GO:1902074: response to salt3.26E-03
77GO:0043090: amino acid import3.26E-03
78GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.26E-03
79GO:0006952: defense response3.26E-03
80GO:0042773: ATP synthesis coupled electron transport3.26E-03
81GO:0042128: nitrate assimilation3.43E-03
82GO:0040008: regulation of growth3.72E-03
83GO:0031540: regulation of anthocyanin biosynthetic process3.78E-03
84GO:0006644: phospholipid metabolic process3.78E-03
85GO:0009787: regulation of abscisic acid-activated signaling pathway3.78E-03
86GO:0009819: drought recovery3.78E-03
87GO:0010150: leaf senescence3.95E-03
88GO:0009699: phenylpropanoid biosynthetic process4.33E-03
89GO:0006075: (1->3)-beta-D-glucan biosynthetic process4.33E-03
90GO:0010204: defense response signaling pathway, resistance gene-independent4.33E-03
91GO:0006499: N-terminal protein myristoylation4.41E-03
92GO:0009407: toxin catabolic process4.41E-03
93GO:0007166: cell surface receptor signaling pathway4.68E-03
94GO:0046685: response to arsenic-containing substance4.90E-03
95GO:0006098: pentose-phosphate shunt4.90E-03
96GO:0006783: heme biosynthetic process4.90E-03
97GO:0009853: photorespiration5.07E-03
98GO:0010205: photoinhibition5.50E-03
99GO:0050832: defense response to fungus5.75E-03
100GO:0043069: negative regulation of programmed cell death6.12E-03
101GO:0007064: mitotic sister chromatid cohesion6.12E-03
102GO:0009870: defense response signaling pathway, resistance gene-dependent6.12E-03
103GO:0006032: chitin catabolic process6.12E-03
104GO:0072593: reactive oxygen species metabolic process6.77E-03
105GO:0009073: aromatic amino acid family biosynthetic process6.77E-03
106GO:0000272: polysaccharide catabolic process6.77E-03
107GO:0006790: sulfur compound metabolic process7.44E-03
108GO:0002213: defense response to insect7.44E-03
109GO:0009651: response to salt stress7.47E-03
110GO:0006468: protein phosphorylation7.55E-03
111GO:0006626: protein targeting to mitochondrion8.13E-03
112GO:0006807: nitrogen compound metabolic process8.13E-03
113GO:0009846: pollen germination8.20E-03
114GO:0002237: response to molecule of bacterial origin8.84E-03
115GO:0010224: response to UV-B9.11E-03
116GO:0046854: phosphatidylinositol phosphorylation9.58E-03
117GO:0042343: indole glucosinolate metabolic process9.58E-03
118GO:0010167: response to nitrate9.58E-03
119GO:0000162: tryptophan biosynthetic process1.03E-02
120GO:0006096: glycolytic process1.04E-02
121GO:2000377: regulation of reactive oxygen species metabolic process1.11E-02
122GO:0006487: protein N-linked glycosylation1.11E-02
123GO:0000027: ribosomal large subunit assembly1.11E-02
124GO:0009624: response to nematode1.26E-02
125GO:0016998: cell wall macromolecule catabolic process1.27E-02
126GO:0098542: defense response to other organism1.27E-02
127GO:0009625: response to insect1.45E-02
128GO:0010584: pollen exine formation1.53E-02
129GO:0009561: megagametogenesis1.53E-02
130GO:0009306: protein secretion1.53E-02
131GO:0070417: cellular response to cold1.62E-02
132GO:0009845: seed germination1.71E-02
133GO:0006508: proteolysis1.73E-02
134GO:0010197: polar nucleus fusion1.81E-02
135GO:0008360: regulation of cell shape1.81E-02
136GO:0009646: response to absence of light1.91E-02
137GO:0009749: response to glucose2.00E-02
138GO:0000302: response to reactive oxygen species2.10E-02
139GO:0010193: response to ozone2.10E-02
140GO:0032502: developmental process2.20E-02
141GO:0030163: protein catabolic process2.31E-02
142GO:0006464: cellular protein modification process2.41E-02
143GO:0009737: response to abscisic acid2.51E-02
144GO:0009735: response to cytokinin2.73E-02
145GO:0009816: defense response to bacterium, incompatible interaction2.84E-02
146GO:0015995: chlorophyll biosynthetic process3.07E-02
147GO:0016311: dephosphorylation3.18E-02
148GO:0009826: unidimensional cell growth3.24E-02
149GO:0008219: cell death3.30E-02
150GO:0009817: defense response to fungus, incompatible interaction3.30E-02
151GO:0030244: cellulose biosynthetic process3.30E-02
152GO:0009832: plant-type cell wall biogenesis3.42E-02
153GO:0007568: aging3.66E-02
154GO:0010119: regulation of stomatal movement3.66E-02
155GO:0006865: amino acid transport3.78E-02
156GO:0045087: innate immune response3.91E-02
157GO:0048366: leaf development3.96E-02
158GO:0006810: transport4.04E-02
159GO:0006457: protein folding4.19E-02
160GO:0006839: mitochondrial transport4.29E-02
161GO:0010200: response to chitin4.31E-02
162GO:0006631: fatty acid metabolic process4.41E-02
163GO:0046777: protein autophosphorylation4.45E-02
164GO:0009744: response to sucrose4.68E-02
165GO:0015979: photosynthesis4.75E-02
166GO:0009644: response to high light intensity4.94E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0050220: prostaglandin-E synthase activity0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
6GO:0005507: copper ion binding6.00E-08
7GO:0004617: phosphoglycerate dehydrogenase activity2.14E-06
8GO:0005388: calcium-transporting ATPase activity2.52E-05
9GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity5.28E-05
10GO:0030976: thiamine pyrophosphate binding7.77E-05
11GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.98E-05
12GO:0003756: protein disulfide isomerase activity1.06E-04
13GO:0051287: NAD binding1.35E-04
14GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.13E-04
15GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.13E-04
16GO:0004425: indole-3-glycerol-phosphate synthase activity2.13E-04
17GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.13E-04
18GO:0004325: ferrochelatase activity2.13E-04
19GO:0000287: magnesium ion binding2.32E-04
20GO:0005524: ATP binding3.48E-04
21GO:0004776: succinate-CoA ligase (GDP-forming) activity4.76E-04
22GO:0004634: phosphopyruvate hydratase activity4.76E-04
23GO:0003994: aconitate hydratase activity4.76E-04
24GO:0015152: glucose-6-phosphate transmembrane transporter activity4.76E-04
25GO:0004775: succinate-CoA ligase (ADP-forming) activity4.76E-04
26GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity4.76E-04
27GO:0015036: disulfide oxidoreductase activity4.76E-04
28GO:0048531: beta-1,3-galactosyltransferase activity4.76E-04
29GO:0004022: alcohol dehydrogenase (NAD) activity5.75E-04
30GO:0004190: aspartic-type endopeptidase activity7.24E-04
31GO:0004383: guanylate cyclase activity7.74E-04
32GO:0016805: dipeptidase activity7.74E-04
33GO:0071917: triose-phosphate transmembrane transporter activity7.74E-04
34GO:0080054: low-affinity nitrate transmembrane transporter activity7.74E-04
35GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.74E-04
36GO:0004148: dihydrolipoyl dehydrogenase activity7.74E-04
37GO:0003840: gamma-glutamyltransferase activity7.74E-04
38GO:0036374: glutathione hydrolase activity7.74E-04
39GO:0008964: phosphoenolpyruvate carboxylase activity7.74E-04
40GO:0009055: electron carrier activity8.25E-04
41GO:0003954: NADH dehydrogenase activity8.90E-04
42GO:0019825: oxygen binding9.67E-04
43GO:0033612: receptor serine/threonine kinase binding1.07E-03
44GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.10E-03
45GO:0035529: NADH pyrophosphatase activity1.10E-03
46GO:0004108: citrate (Si)-synthase activity1.10E-03
47GO:0004449: isocitrate dehydrogenase (NAD+) activity1.10E-03
48GO:0020037: heme binding1.45E-03
49GO:0015120: phosphoglycerate transmembrane transporter activity1.47E-03
50GO:0004737: pyruvate decarboxylase activity1.47E-03
51GO:0005471: ATP:ADP antiporter activity1.87E-03
52GO:0004040: amidase activity1.87E-03
53GO:0047631: ADP-ribose diphosphatase activity1.87E-03
54GO:0005506: iron ion binding1.88E-03
55GO:0015035: protein disulfide oxidoreductase activity2.05E-03
56GO:0016746: transferase activity, transferring acyl groups2.05E-03
57GO:0000210: NAD+ diphosphatase activity2.31E-03
58GO:0004029: aldehyde dehydrogenase (NAD) activity2.31E-03
59GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.31E-03
60GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.31E-03
61GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.77E-03
62GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.77E-03
63GO:0102391: decanoate--CoA ligase activity2.77E-03
64GO:0004012: phospholipid-translocating ATPase activity2.77E-03
65GO:0016597: amino acid binding2.90E-03
66GO:0004620: phospholipase activity3.26E-03
67GO:0004467: long-chain fatty acid-CoA ligase activity3.26E-03
68GO:0004143: diacylglycerol kinase activity3.26E-03
69GO:0016831: carboxy-lyase activity3.26E-03
70GO:0008235: metalloexopeptidase activity3.26E-03
71GO:0008121: ubiquinol-cytochrome-c reductase activity3.26E-03
72GO:0008320: protein transmembrane transporter activity3.26E-03
73GO:0043295: glutathione binding3.26E-03
74GO:0030247: polysaccharide binding3.61E-03
75GO:0004714: transmembrane receptor protein tyrosine kinase activity3.78E-03
76GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.00E-03
77GO:0005516: calmodulin binding4.07E-03
78GO:0003843: 1,3-beta-D-glucan synthase activity4.33E-03
79GO:0050897: cobalt ion binding4.62E-03
80GO:0047617: acyl-CoA hydrolase activity5.50E-03
81GO:0030955: potassium ion binding5.50E-03
82GO:0015112: nitrate transmembrane transporter activity5.50E-03
83GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.50E-03
84GO:0004743: pyruvate kinase activity5.50E-03
85GO:0051539: 4 iron, 4 sulfur cluster binding5.77E-03
86GO:0005509: calcium ion binding5.94E-03
87GO:0004568: chitinase activity6.12E-03
88GO:0004364: glutathione transferase activity6.27E-03
89GO:0004674: protein serine/threonine kinase activity6.47E-03
90GO:0001054: RNA polymerase I activity6.77E-03
91GO:0004177: aminopeptidase activity6.77E-03
92GO:0004129: cytochrome-c oxidase activity6.77E-03
93GO:0046961: proton-transporting ATPase activity, rotational mechanism6.77E-03
94GO:0051537: 2 iron, 2 sulfur cluster binding7.06E-03
95GO:0015293: symporter activity7.34E-03
96GO:0005262: calcium channel activity8.13E-03
97GO:0015114: phosphate ion transmembrane transporter activity8.13E-03
98GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.13E-03
99GO:0005315: inorganic phosphate transmembrane transporter activity8.13E-03
100GO:0050660: flavin adenine dinucleotide binding8.28E-03
101GO:0004175: endopeptidase activity8.84E-03
102GO:0004497: monooxygenase activity9.04E-03
103GO:0008061: chitin binding9.58E-03
104GO:0003712: transcription cofactor activity9.58E-03
105GO:0016301: kinase activity1.09E-02
106GO:0051536: iron-sulfur cluster binding1.11E-02
107GO:0004298: threonine-type endopeptidase activity1.27E-02
108GO:0004672: protein kinase activity1.33E-02
109GO:0004499: N,N-dimethylaniline monooxygenase activity1.53E-02
110GO:0050662: coenzyme binding1.91E-02
111GO:0015297: antiporter activity2.08E-02
112GO:0008137: NADH dehydrogenase (ubiquinone) activity2.10E-02
113GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.31E-02
114GO:0005215: transporter activity2.68E-02
115GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.18E-02
116GO:0015238: drug transmembrane transporter activity3.42E-02
117GO:0004222: metalloendopeptidase activity3.54E-02
118GO:0030145: manganese ion binding3.66E-02
119GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.66E-02
120GO:0016740: transferase activity3.90E-02
121GO:0050661: NADP binding4.29E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005886: plasma membrane1.78E-09
3GO:0005774: vacuolar membrane5.75E-07
4GO:0005829: cytosol4.58E-06
5GO:0005783: endoplasmic reticulum5.77E-06
6GO:0005773: vacuole6.32E-06
7GO:0008250: oligosaccharyltransferase complex5.28E-05
8GO:0045252: oxoglutarate dehydrogenase complex2.13E-04
9GO:0005911: cell-cell junction2.13E-04
10GO:0016020: membrane3.52E-04
11GO:0005740: mitochondrial envelope3.82E-04
12GO:0016021: integral component of membrane3.94E-04
13GO:0005618: cell wall4.72E-04
14GO:0031304: intrinsic component of mitochondrial inner membrane4.76E-04
15GO:0005901: caveola4.76E-04
16GO:0000015: phosphopyruvate hydratase complex4.76E-04
17GO:0031314: extrinsic component of mitochondrial inner membrane4.76E-04
18GO:0030134: ER to Golgi transport vesicle4.76E-04
19GO:0005794: Golgi apparatus4.92E-04
20GO:0045271: respiratory chain complex I9.78E-04
21GO:0048046: apoplast1.10E-03
22GO:0005789: endoplasmic reticulum membrane1.35E-03
23GO:0030660: Golgi-associated vesicle membrane1.47E-03
24GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.47E-03
25GO:0005747: mitochondrial respiratory chain complex I1.62E-03
26GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.87E-03
27GO:0005746: mitochondrial respiratory chain1.87E-03
28GO:0005743: mitochondrial inner membrane2.99E-03
29GO:0009507: chloroplast3.06E-03
30GO:0005788: endoplasmic reticulum lumen3.25E-03
31GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.78E-03
32GO:0019773: proteasome core complex, alpha-subunit complex4.33E-03
33GO:0000148: 1,3-beta-D-glucan synthase complex4.33E-03
34GO:0005736: DNA-directed RNA polymerase I complex4.90E-03
35GO:0009506: plasmodesma5.58E-03
36GO:0005765: lysosomal membrane6.77E-03
37GO:0031966: mitochondrial membrane8.20E-03
38GO:0005750: mitochondrial respiratory chain complex III8.84E-03
39GO:0031969: chloroplast membrane9.04E-03
40GO:0030176: integral component of endoplasmic reticulum membrane9.58E-03
41GO:0009536: plastid9.75E-03
42GO:0005777: peroxisome9.85E-03
43GO:0009505: plant-type cell wall1.01E-02
44GO:0005839: proteasome core complex1.27E-02
45GO:0005741: mitochondrial outer membrane1.27E-02
46GO:0005759: mitochondrial matrix1.98E-02
47GO:0009504: cell plate2.00E-02
48GO:0005739: mitochondrion2.09E-02
49GO:0005887: integral component of plasma membrane2.18E-02
50GO:0032580: Golgi cisterna membrane2.41E-02
51GO:0046658: anchored component of plasma membrane2.88E-02
52GO:0009570: chloroplast stroma3.03E-02
53GO:0022625: cytosolic large ribosomal subunit4.38E-02
Gene type



Gene DE type