co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G21460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
2	GO:0043100: pyrimidine nucleobase salvage	5.64E-05
3	GO:0007154: cell communication	5.64E-05
4	GO:0071554: cell wall organization or biogenesis	1.07E-04
5	GO:0009765: photosynthesis, light harvesting	2.04E-04
6	GO:0071555: cell wall organization	2.21E-04
7	GO:0016120: carotene biosynthetic process	2.62E-04
8	GO:0009635: response to herbicide	3.24E-04
9	GO:0017148: negative regulation of translation	3.89E-04
10	GO:0005975: carbohydrate metabolic process	4.31E-04
11	GO:0030091: protein repair	5.25E-04
12	GO:0010192: mucilage biosynthetic process	8.27E-04
13	GO:0009698: phenylpropanoid metabolic process	9.07E-04
14	GO:0015706: nitrate transport	9.89E-04
15	GO:0048768: root hair cell tip growth	1.16E-03
16	GO:0010167: response to nitrate	1.25E-03
17	GO:0009833: plant-type primary cell wall biogenesis	1.34E-03
18	GO:0009768: photosynthesis, light harvesting in photosystem I	1.53E-03
19	GO:0009411: response to UV	1.83E-03
20	GO:0010584: pollen exine formation	1.94E-03
21	GO:0016117: carotenoid biosynthetic process	2.04E-03
22	GO:0080167: response to karrikin	2.07E-03
23	GO:0015991: ATP hydrolysis coupled proton transport	2.15E-03
24	GO:0015986: ATP synthesis coupled proton transport	2.38E-03
25	GO:0010583: response to cyclopentenone	2.73E-03
26	GO:1901657: glycosyl compound metabolic process	2.85E-03
27	GO:0006464: cellular protein modification process	2.97E-03
28	GO:0009911: positive regulation of flower development	3.34E-03
29	GO:0042128: nitrate assimilation	3.60E-03
30	GO:0048573: photoperiodism, flowering	3.73E-03
31	GO:0018298: protein-chromophore linkage	4.00E-03
32	GO:0030244: cellulose biosynthetic process	4.00E-03
33	GO:0009813: flavonoid biosynthetic process	4.14E-03
34	GO:0009832: plant-type cell wall biogenesis	4.14E-03
35	GO:0010218: response to far red light	4.28E-03
36	GO:0010119: regulation of stomatal movement	4.42E-03
37	GO:0009637: response to blue light	4.70E-03
38	GO:0010114: response to red light	5.60E-03
39	GO:0009809: lignin biosynthetic process	6.88E-03
40	GO:0006857: oligopeptide transport	7.21E-03
41	GO:0009909: regulation of flower development	7.38E-03
42	GO:0043086: negative regulation of catalytic activity	7.73E-03
43	GO:0009845: seed germination	1.09E-02
44	GO:0030154: cell differentiation	1.18E-02
45	GO:0007623: circadian rhythm	1.29E-02
46	GO:0016192: vesicle-mediated transport	2.13E-02
47	GO:0015979: photosynthesis	2.25E-02
48	GO:0032259: methylation	2.62E-02
49	GO:0008152: metabolic process	2.90E-02
50	GO:0009734: auxin-activated signaling pathway	3.46E-02
51	GO:0009908: flower development	3.79E-02
52	GO:0035556: intracellular signal transduction	4.23E-02
53	GO:0051301: cell division	4.33E-02
54	GO:0055085: transmembrane transport	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
2	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
3	GO:0102118: gibberellin A4 carboxyl methyltransferase activity	0.00E+00
4	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
5	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
6	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	2.19E-05
7	GO:0010341: gibberellin carboxyl-O-methyltransferase activity	2.19E-05
8	GO:0010313: phytochrome binding	2.19E-05
9	GO:0048027: mRNA 5'-UTR binding	1.49E-04
10	GO:0016413: O-acetyltransferase activity	1.50E-04
11	GO:0045430: chalcone isomerase activity	2.04E-04
12	GO:0008429: phosphatidylethanolamine binding	3.24E-04
13	GO:0016621: cinnamoyl-CoA reductase activity	4.56E-04
14	GO:0004650: polygalacturonase activity	6.02E-04
15	GO:0016207: 4-coumarate-CoA ligase activity	6.71E-04
16	GO:0015112: nitrate transmembrane transporter activity	7.48E-04
17	GO:0016829: lyase activity	8.75E-04
18	GO:0046961: proton-transporting ATPase activity, rotational mechanism	9.07E-04
19	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.16E-03
20	GO:0031409: pigment binding	1.34E-03
21	GO:0016760: cellulose synthase (UDP-forming) activity	1.83E-03
22	GO:0004518: nuclease activity	2.73E-03
23	GO:0016759: cellulose synthase activity	2.97E-03
24	GO:0016168: chlorophyll binding	3.47E-03
25	GO:0102483: scopolin beta-glucosidase activity	3.73E-03
26	GO:0030247: polysaccharide binding	3.73E-03
27	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.87E-03
28	GO:0008422: beta-glucosidase activity	5.00E-03
29	GO:0015293: symporter activity	6.07E-03
30	GO:0016874: ligase activity	8.43E-03
31	GO:0005215: transporter activity	1.20E-02
32	GO:0046910: pectinesterase inhibitor activity	1.23E-02
33	GO:0015297: antiporter activity	1.25E-02
34	GO:0008017: microtubule binding	1.33E-02
35	GO:0016757: transferase activity, transferring glycosyl groups	3.69E-02
36	GO:0016887: ATPase activity	3.70E-02
37	GO:0016740: transferase activity	4.69E-02
38	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.64E-05
2	GO:0009509: chromoplast	9.94E-05
3	GO:0009526: plastid envelope	2.04E-04
4	GO:0031225: anchored component of membrane	1.16E-03
5	GO:0030076: light-harvesting complex	1.25E-03
6	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.25E-03
7	GO:0009522: photosystem I	2.38E-03
8	GO:0009523: photosystem II	2.49E-03
9	GO:0005783: endoplasmic reticulum	4.32E-03
10	GO:0005794: Golgi apparatus	4.90E-03
11	GO:0016021: integral component of membrane	7.30E-03
12	GO:0010287: plastoglobule	9.91E-03
13	GO:0009543: chloroplast thylakoid lumen	1.03E-02
14	GO:0046658: anchored component of plasma membrane	1.58E-02
15	GO:0031969: chloroplast membrane	2.05E-02
16	GO:0009579: thylakoid	4.63E-02
17	GO:0009534: chloroplast thylakoid	4.66E-02