co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G21130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010398: xylogalacturonan metabolic process	0.00E+00
2	GO:0006227: dUDP biosynthetic process	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0006233: dTDP biosynthetic process	0.00E+00
5	GO:0006235: dTTP biosynthetic process	0.00E+00
6	GO:0043269: regulation of ion transport	0.00E+00
7	GO:0006105: succinate metabolic process	0.00E+00
8	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
9	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
10	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
11	GO:0019484: beta-alanine catabolic process	0.00E+00
12	GO:0009399: nitrogen fixation	1.08E-05
13	GO:0046167: glycerol-3-phosphate biosynthetic process	1.60E-04
14	GO:0009450: gamma-aminobutyric acid catabolic process	1.60E-04
15	GO:1990641: response to iron ion starvation	1.60E-04
16	GO:1902265: abscisic acid homeostasis	1.60E-04
17	GO:0009865: pollen tube adhesion	1.60E-04
18	GO:0006540: glutamate decarboxylation to succinate	1.60E-04
19	GO:0001666: response to hypoxia	1.94E-04
20	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	3.65E-04
21	GO:0010033: response to organic substance	3.65E-04
22	GO:0006641: triglyceride metabolic process	3.65E-04
23	GO:0009727: detection of ethylene stimulus	3.65E-04
24	GO:0006101: citrate metabolic process	3.65E-04
25	GO:0030187: melatonin biosynthetic process	3.65E-04
26	GO:2000693: positive regulation of seed maturation	3.65E-04
27	GO:0010030: positive regulation of seed germination	4.92E-04
28	GO:0071398: cellular response to fatty acid	5.97E-04
29	GO:0042344: indole glucosinolate catabolic process	5.97E-04
30	GO:0006954: inflammatory response	5.97E-04
31	GO:0019563: glycerol catabolic process	5.97E-04
32	GO:0051259: protein oligomerization	8.53E-04
33	GO:0006624: vacuolar protein processing	8.53E-04
34	GO:0006020: inositol metabolic process	8.53E-04
35	GO:0072334: UDP-galactose transmembrane transport	8.53E-04
36	GO:0006072: glycerol-3-phosphate metabolic process	8.53E-04
37	GO:0015749: monosaccharide transport	8.53E-04
38	GO:0009113: purine nucleobase biosynthetic process	8.53E-04
39	GO:0071215: cellular response to abscisic acid stimulus	8.67E-04
40	GO:0006542: glutamine biosynthetic process	1.13E-03
41	GO:0006646: phosphatidylethanolamine biosynthetic process	1.13E-03
42	GO:0009687: abscisic acid metabolic process	1.13E-03
43	GO:1902584: positive regulation of response to water deprivation	1.13E-03
44	GO:0006536: glutamate metabolic process	1.13E-03
45	GO:0010188: response to microbial phytotoxin	1.13E-03
46	GO:0044550: secondary metabolite biosynthetic process	1.14E-03
47	GO:0046323: glucose import	1.17E-03
48	GO:0048544: recognition of pollen	1.26E-03
49	GO:0008654: phospholipid biosynthetic process	1.35E-03
50	GO:0007029: endoplasmic reticulum organization	1.43E-03
51	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.43E-03
52	GO:0006635: fatty acid beta-oxidation	1.44E-03
53	GO:0006354: DNA-templated transcription, elongation	1.76E-03
54	GO:0016070: RNA metabolic process	1.76E-03
55	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.76E-03
56	GO:0042732: D-xylose metabolic process	1.76E-03
57	GO:0010286: heat acclimation	1.84E-03
58	GO:0071470: cellular response to osmotic stress	2.11E-03
59	GO:0010044: response to aluminum ion	2.48E-03
60	GO:0070370: cellular heat acclimation	2.48E-03
61	GO:0009396: folic acid-containing compound biosynthetic process	2.48E-03
62	GO:0006468: protein phosphorylation	2.65E-03
63	GO:0006102: isocitrate metabolic process	2.88E-03
64	GO:0016559: peroxisome fission	2.88E-03
65	GO:0006644: phospholipid metabolic process	2.88E-03
66	GO:0009819: drought recovery	2.88E-03
67	GO:0009617: response to bacterium	2.96E-03
68	GO:0030968: endoplasmic reticulum unfolded protein response	3.29E-03
69	GO:0009808: lignin metabolic process	3.29E-03
70	GO:0006979: response to oxidative stress	3.40E-03
71	GO:0006099: tricarboxylic acid cycle	3.55E-03
72	GO:0006098: pentose-phosphate shunt	3.72E-03
73	GO:0046916: cellular transition metal ion homeostasis	3.72E-03
74	GO:0006379: mRNA cleavage	3.72E-03
75	GO:0009733: response to auxin	4.11E-03
76	GO:0035999: tetrahydrofolate interconversion	4.17E-03
77	GO:0048829: root cap development	4.64E-03
78	GO:0051555: flavonol biosynthetic process	4.64E-03
79	GO:0006535: cysteine biosynthetic process from serine	4.64E-03
80	GO:0006378: mRNA polyadenylation	5.12E-03
81	GO:0009682: induced systemic resistance	5.12E-03
82	GO:0052544: defense response by callose deposition in cell wall	5.12E-03
83	GO:0080167: response to karrikin	5.41E-03
84	GO:0071365: cellular response to auxin stimulus	5.62E-03
85	GO:0006807: nitrogen compound metabolic process	6.14E-03
86	GO:0034605: cellular response to heat	6.67E-03
87	GO:0006541: glutamine metabolic process	6.67E-03
88	GO:0002237: response to molecule of bacterial origin	6.67E-03
89	GO:0007034: vacuolar transport	6.67E-03
90	GO:0045454: cell redox homeostasis	6.79E-03
91	GO:0009969: xyloglucan biosynthetic process	7.22E-03
92	GO:0007031: peroxisome organization	7.22E-03
93	GO:0010167: response to nitrate	7.22E-03
94	GO:0005985: sucrose metabolic process	7.22E-03
95	GO:0071732: cellular response to nitric oxide	7.22E-03
96	GO:0046686: response to cadmium ion	7.28E-03
97	GO:0000162: tryptophan biosynthetic process	7.79E-03
98	GO:0034976: response to endoplasmic reticulum stress	7.79E-03
99	GO:0019344: cysteine biosynthetic process	8.38E-03
100	GO:0055114: oxidation-reduction process	8.54E-03
101	GO:0006825: copper ion transport	8.97E-03
102	GO:0009651: response to salt stress	9.36E-03
103	GO:0031408: oxylipin biosynthetic process	9.59E-03
104	GO:0071456: cellular response to hypoxia	1.02E-02
105	GO:0035428: hexose transmembrane transport	1.02E-02
106	GO:0006012: galactose metabolic process	1.09E-02
107	GO:0009693: ethylene biosynthetic process	1.09E-02
108	GO:0015991: ATP hydrolysis coupled proton transport	1.29E-02
109	GO:0042631: cellular response to water deprivation	1.29E-02
110	GO:0045489: pectin biosynthetic process	1.36E-02
111	GO:0071472: cellular response to salt stress	1.36E-02
112	GO:0006885: regulation of pH	1.36E-02
113	GO:0010154: fruit development	1.36E-02
114	GO:0006520: cellular amino acid metabolic process	1.36E-02
115	GO:0009734: auxin-activated signaling pathway	1.37E-02
116	GO:0009646: response to absence of light	1.43E-02
117	GO:0010150: leaf senescence	1.45E-02
118	GO:0010183: pollen tube guidance	1.50E-02
119	GO:0009749: response to glucose	1.50E-02
120	GO:0010583: response to cyclopentenone	1.65E-02
121	GO:0071281: cellular response to iron ion	1.73E-02
122	GO:0019760: glucosinolate metabolic process	1.81E-02
123	GO:0051607: defense response to virus	1.97E-02
124	GO:0009816: defense response to bacterium, incompatible interaction	2.13E-02
125	GO:0042128: nitrate assimilation	2.22E-02
126	GO:0048573: photoperiodism, flowering	2.30E-02
127	GO:0006950: response to stress	2.30E-02
128	GO:0005975: carbohydrate metabolic process	2.35E-02
129	GO:0008219: cell death	2.47E-02
130	GO:0009817: defense response to fungus, incompatible interaction	2.47E-02
131	GO:0010311: lateral root formation	2.56E-02
132	GO:0010043: response to zinc ion	2.74E-02
133	GO:0007568: aging	2.74E-02
134	GO:0009631: cold acclimation	2.74E-02
135	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.89E-02
136	GO:0046777: protein autophosphorylation	2.98E-02
137	GO:0030001: metal ion transport	3.21E-02
138	GO:0009926: auxin polar transport	3.51E-02
139	GO:0009744: response to sucrose	3.51E-02
140	GO:0051707: response to other organism	3.51E-02
141	GO:0007165: signal transduction	3.73E-02
142	GO:0009636: response to toxic substance	3.81E-02
143	GO:0009751: response to salicylic acid	4.05E-02
144	GO:0006629: lipid metabolic process	4.11E-02
145	GO:0042538: hyperosmotic salinity response	4.12E-02
146	GO:0006812: cation transport	4.12E-02
147	GO:0006397: mRNA processing	4.28E-02
148	GO:0048364: root development	4.28E-02
149	GO:0009809: lignin biosynthetic process	4.34E-02
150	GO:0006813: potassium ion transport	4.34E-02
151	GO:0009753: response to jasmonic acid	4.40E-02
152	GO:0042742: defense response to bacterium	4.42E-02
153	GO:0051603: proteolysis involved in cellular protein catabolic process	4.44E-02
154	GO:0006857: oligopeptide transport	4.55E-02
155	GO:0016310: phosphorylation	4.71E-02
156	GO:0048367: shoot system development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
3	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
4	GO:0009045: xylose isomerase activity	0.00E+00
5	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
6	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
7	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
8	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
9	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
10	GO:0004370: glycerol kinase activity	0.00E+00
11	GO:0004798: thymidylate kinase activity	0.00E+00
12	GO:0005507: copper ion binding	1.10E-05
13	GO:0004356: glutamate-ammonia ligase activity	3.28E-05
14	GO:0009679: hexose:proton symporter activity	1.60E-04
15	GO:0046870: cadmium ion binding	1.60E-04
16	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.60E-04
17	GO:0003867: 4-aminobutyrate transaminase activity	1.60E-04
18	GO:0030544: Hsp70 protein binding	1.60E-04
19	GO:0050200: plasmalogen synthase activity	1.60E-04
20	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.60E-04
21	GO:0017096: acetylserotonin O-methyltransferase activity	1.60E-04
22	GO:0047372: acylglycerol lipase activity	2.97E-04
23	GO:0050897: cobalt ion binding	3.38E-04
24	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	3.65E-04
25	GO:0004566: beta-glucuronidase activity	3.65E-04
26	GO:0032791: lead ion binding	3.65E-04
27	GO:0004609: phosphatidylserine decarboxylase activity	3.65E-04
28	GO:0003994: aconitate hydratase activity	3.65E-04
29	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	3.65E-04
30	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	3.65E-04
31	GO:0004352: glutamate dehydrogenase (NAD+) activity	3.65E-04
32	GO:0004329: formate-tetrahydrofolate ligase activity	3.65E-04
33	GO:0019200: carbohydrate kinase activity	3.65E-04
34	GO:0047209: coniferyl-alcohol glucosyltransferase activity	3.65E-04
35	GO:0016301: kinase activity	5.45E-04
36	GO:0016531: copper chaperone activity	5.97E-04
37	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.97E-04
38	GO:0005524: ATP binding	8.13E-04
39	GO:0000339: RNA cap binding	8.53E-04
40	GO:0048027: mRNA 5'-UTR binding	8.53E-04
41	GO:0009041: uridylate kinase activity	8.53E-04
42	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.53E-04
43	GO:0004108: citrate (Si)-synthase activity	8.53E-04
44	GO:0004834: tryptophan synthase activity	1.13E-03
45	GO:0004737: pyruvate decarboxylase activity	1.13E-03
46	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.13E-03
47	GO:0043015: gamma-tubulin binding	1.13E-03
48	GO:0003995: acyl-CoA dehydrogenase activity	1.13E-03
49	GO:0010294: abscisic acid glucosyltransferase activity	1.43E-03
50	GO:0005459: UDP-galactose transmembrane transporter activity	1.43E-03
51	GO:0015145: monosaccharide transmembrane transporter activity	1.43E-03
52	GO:0003997: acyl-CoA oxidase activity	1.43E-03
53	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.47E-03
54	GO:0030976: thiamine pyrophosphate binding	1.76E-03
55	GO:0019137: thioglucosidase activity	1.76E-03
56	GO:0035252: UDP-xylosyltransferase activity	1.76E-03
57	GO:0015144: carbohydrate transmembrane transporter activity	1.97E-03
58	GO:0004124: cysteine synthase activity	2.11E-03
59	GO:0005351: sugar:proton symporter activity	2.30E-03
60	GO:0016831: carboxy-lyase activity	2.48E-03
61	GO:0004620: phospholipase activity	2.48E-03
62	GO:0004034: aldose 1-epimerase activity	2.88E-03
63	GO:0008422: beta-glucosidase activity	3.71E-03
64	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.72E-03
65	GO:0071949: FAD binding	3.72E-03
66	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.17E-03
67	GO:0009672: auxin:proton symporter activity	4.17E-03
68	GO:0004713: protein tyrosine kinase activity	4.64E-03
69	GO:0004521: endoribonuclease activity	5.62E-03
70	GO:0004175: endopeptidase activity	6.67E-03
71	GO:0045735: nutrient reservoir activity	6.95E-03
72	GO:0004674: protein serine/threonine kinase activity	7.06E-03
73	GO:0019825: oxygen binding	7.38E-03
74	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.64E-03
75	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.64E-03
76	GO:0031418: L-ascorbic acid binding	8.38E-03
77	GO:0043424: protein histidine kinase binding	8.97E-03
78	GO:0005509: calcium ion binding	1.11E-02
79	GO:0003756: protein disulfide isomerase activity	1.15E-02
80	GO:0030170: pyridoxal phosphate binding	1.17E-02
81	GO:0005506: iron ion binding	1.23E-02
82	GO:0005451: monovalent cation:proton antiporter activity	1.29E-02
83	GO:0015299: solute:proton antiporter activity	1.43E-02
84	GO:0005355: glucose transmembrane transporter activity	1.43E-02
85	GO:0010181: FMN binding	1.43E-02
86	GO:0008194: UDP-glycosyltransferase activity	1.62E-02
87	GO:0004197: cysteine-type endopeptidase activity	1.65E-02
88	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.73E-02
89	GO:0015385: sodium:proton antiporter activity	1.73E-02
90	GO:0016791: phosphatase activity	1.81E-02
91	GO:0042802: identical protein binding	1.85E-02
92	GO:0102483: scopolin beta-glucosidase activity	2.30E-02
93	GO:0004721: phosphoprotein phosphatase activity	2.30E-02
94	GO:0030247: polysaccharide binding	2.30E-02
95	GO:0020037: heme binding	2.48E-02
96	GO:0030246: carbohydrate binding	2.67E-02
97	GO:0030145: manganese ion binding	2.74E-02
98	GO:0004497: monooxygenase activity	2.79E-02
99	GO:0051539: 4 iron, 4 sulfur cluster binding	3.21E-02
100	GO:0043621: protein self-association	3.71E-02
101	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.34E-02
102	GO:0016298: lipase activity	4.44E-02
103	GO:0031625: ubiquitin protein ligase binding	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.99E-05
2	GO:0016021: integral component of membrane	1.51E-04
3	GO:0016020: membrane	5.51E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.97E-04
5	GO:0009506: plasmodesma	6.50E-04
6	GO:0005783: endoplasmic reticulum	7.28E-04
7	GO:0005849: mRNA cleavage factor complex	8.53E-04
8	GO:0000323: lytic vacuole	8.53E-04
9	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.13E-03
10	GO:0005777: peroxisome	1.24E-03
11	GO:0005794: Golgi apparatus	1.67E-03
12	GO:0005851: eukaryotic translation initiation factor 2B complex	1.76E-03
13	GO:0000815: ESCRT III complex	2.11E-03
14	GO:0030173: integral component of Golgi membrane	2.11E-03
15	GO:0009514: glyoxysome	3.29E-03
16	GO:0005779: integral component of peroxisomal membrane	3.29E-03
17	GO:0005765: lysosomal membrane	5.12E-03
18	GO:0030176: integral component of endoplasmic reticulum membrane	7.22E-03
19	GO:0005773: vacuole	8.29E-03
20	GO:0005758: mitochondrial intermembrane space	8.38E-03
21	GO:0005737: cytoplasm	9.42E-03
22	GO:0009705: plant-type vacuole membrane	1.45E-02
23	GO:0031965: nuclear membrane	1.50E-02
24	GO:0005778: peroxisomal membrane	1.89E-02
25	GO:0000932: P-body	2.05E-02
26	GO:0005789: endoplasmic reticulum membrane	2.37E-02
27	GO:0000325: plant-type vacuole	2.74E-02
28	GO:0005774: vacuolar membrane	2.86E-02
29	GO:0005829: cytosol	2.89E-02
30	GO:0005618: cell wall	3.58E-02
31	GO:0043231: intracellular membrane-bounded organelle	4.52E-02