GO Enrichment Analysis of Co-expressed Genes with
AT1G19800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006430: lysyl-tRNA aminoacylation | 7.39E-05 |
| 5 | GO:0071588: hydrogen peroxide mediated signaling pathway | 7.39E-05 |
| 6 | GO:0043085: positive regulation of catalytic activity | 9.76E-05 |
| 7 | GO:0006415: translational termination | 9.76E-05 |
| 8 | GO:0009658: chloroplast organization | 1.33E-04 |
| 9 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.37E-04 |
| 10 | GO:0006418: tRNA aminoacylation for protein translation | 2.37E-04 |
| 11 | GO:0015979: photosynthesis | 2.40E-04 |
| 12 | GO:0045454: cell redox homeostasis | 2.60E-04 |
| 13 | GO:0006696: ergosterol biosynthetic process | 2.99E-04 |
| 14 | GO:0010581: regulation of starch biosynthetic process | 2.99E-04 |
| 15 | GO:0016117: carotenoid biosynthetic process | 3.70E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 4.32E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.32E-04 |
| 18 | GO:0016556: mRNA modification | 4.32E-04 |
| 19 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 5.75E-04 |
| 20 | GO:0010021: amylopectin biosynthetic process | 5.75E-04 |
| 21 | GO:0015994: chlorophyll metabolic process | 5.75E-04 |
| 22 | GO:0006564: L-serine biosynthetic process | 7.29E-04 |
| 23 | GO:0031365: N-terminal protein amino acid modification | 7.29E-04 |
| 24 | GO:0042549: photosystem II stabilization | 8.91E-04 |
| 25 | GO:0016554: cytidine to uridine editing | 8.91E-04 |
| 26 | GO:0048481: plant ovule development | 9.73E-04 |
| 27 | GO:0018298: protein-chromophore linkage | 9.73E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 1.06E-03 |
| 29 | GO:0010019: chloroplast-nucleus signaling pathway | 1.06E-03 |
| 30 | GO:0009637: response to blue light | 1.22E-03 |
| 31 | GO:0009645: response to low light intensity stimulus | 1.24E-03 |
| 32 | GO:0010196: nonphotochemical quenching | 1.24E-03 |
| 33 | GO:0034599: cellular response to oxidative stress | 1.27E-03 |
| 34 | GO:0010114: response to red light | 1.56E-03 |
| 35 | GO:0019430: removal of superoxide radicals | 1.63E-03 |
| 36 | GO:0032544: plastid translation | 1.63E-03 |
| 37 | GO:0071482: cellular response to light stimulus | 1.63E-03 |
| 38 | GO:0009657: plastid organization | 1.63E-03 |
| 39 | GO:1900865: chloroplast RNA modification | 2.05E-03 |
| 40 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.05E-03 |
| 41 | GO:0006352: DNA-templated transcription, initiation | 2.51E-03 |
| 42 | GO:0009773: photosynthetic electron transport in photosystem I | 2.51E-03 |
| 43 | GO:0009767: photosynthetic electron transport chain | 3.00E-03 |
| 44 | GO:0010207: photosystem II assembly | 3.25E-03 |
| 45 | GO:0010020: chloroplast fission | 3.25E-03 |
| 46 | GO:0042744: hydrogen peroxide catabolic process | 4.18E-03 |
| 47 | GO:0009735: response to cytokinin | 4.30E-03 |
| 48 | GO:0006810: transport | 4.52E-03 |
| 49 | GO:0061077: chaperone-mediated protein folding | 4.63E-03 |
| 50 | GO:0080092: regulation of pollen tube growth | 4.93E-03 |
| 51 | GO:0055114: oxidation-reduction process | 5.54E-03 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 6.18E-03 |
| 53 | GO:0006662: glycerol ether metabolic process | 6.51E-03 |
| 54 | GO:0006814: sodium ion transport | 6.84E-03 |
| 55 | GO:0019252: starch biosynthetic process | 7.19E-03 |
| 56 | GO:0000302: response to reactive oxygen species | 7.53E-03 |
| 57 | GO:0016125: sterol metabolic process | 8.61E-03 |
| 58 | GO:0071805: potassium ion transmembrane transport | 8.98E-03 |
| 59 | GO:0080167: response to karrikin | 9.71E-03 |
| 60 | GO:0010027: thylakoid membrane organization | 9.74E-03 |
| 61 | GO:0016126: sterol biosynthetic process | 9.74E-03 |
| 62 | GO:0046777: protein autophosphorylation | 1.04E-02 |
| 63 | GO:0042128: nitrate assimilation | 1.05E-02 |
| 64 | GO:0009817: defense response to fungus, incompatible interaction | 1.17E-02 |
| 65 | GO:0010218: response to far red light | 1.26E-02 |
| 66 | GO:0009631: cold acclimation | 1.30E-02 |
| 67 | GO:0032259: methylation | 1.38E-02 |
| 68 | GO:0006508: proteolysis | 1.38E-02 |
| 69 | GO:0009853: photorespiration | 1.39E-02 |
| 70 | GO:0009644: response to high light intensity | 1.76E-02 |
| 71 | GO:0006813: potassium ion transport | 2.05E-02 |
| 72 | GO:0018105: peptidyl-serine phosphorylation | 2.69E-02 |
| 73 | GO:0006396: RNA processing | 2.69E-02 |
| 74 | GO:0035556: intracellular signal transduction | 2.70E-02 |
| 75 | GO:0016310: phosphorylation | 3.64E-02 |
| 76 | GO:0040008: regulation of growth | 3.77E-02 |
| 77 | GO:0007623: circadian rhythm | 3.89E-02 |
| 78 | GO:0009451: RNA modification | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 5 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 8 | GO:0016149: translation release factor activity, codon specific | 2.80E-06 |
| 9 | GO:0051920: peroxiredoxin activity | 1.97E-05 |
| 10 | GO:0016209: antioxidant activity | 3.55E-05 |
| 11 | GO:0004033: aldo-keto reductase (NADP) activity | 3.55E-05 |
| 12 | GO:0003747: translation release factor activity | 5.64E-05 |
| 13 | GO:0009496: plastoquinol--plastocyanin reductase activity | 7.39E-05 |
| 14 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 7.39E-05 |
| 15 | GO:0004824: lysine-tRNA ligase activity | 7.39E-05 |
| 16 | GO:0051996: squalene synthase activity | 7.39E-05 |
| 17 | GO:0008047: enzyme activator activity | 8.25E-05 |
| 18 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.45E-04 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.61E-04 |
| 20 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.77E-04 |
| 21 | GO:0047746: chlorophyllase activity | 1.77E-04 |
| 22 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.77E-04 |
| 23 | GO:0033201: alpha-1,4-glucan synthase activity | 1.77E-04 |
| 24 | GO:0031409: pigment binding | 1.91E-04 |
| 25 | GO:0005528: FK506 binding | 2.13E-04 |
| 26 | GO:0015079: potassium ion transmembrane transporter activity | 2.37E-04 |
| 27 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.99E-04 |
| 28 | GO:0004373: glycogen (starch) synthase activity | 2.99E-04 |
| 29 | GO:0002161: aminoacyl-tRNA editing activity | 2.99E-04 |
| 30 | GO:0004812: aminoacyl-tRNA ligase activity | 3.70E-04 |
| 31 | GO:0008097: 5S rRNA binding | 4.32E-04 |
| 32 | GO:0008508: bile acid:sodium symporter activity | 4.32E-04 |
| 33 | GO:0004791: thioredoxin-disulfide reductase activity | 4.63E-04 |
| 34 | GO:0009011: starch synthase activity | 5.75E-04 |
| 35 | GO:0004659: prenyltransferase activity | 5.75E-04 |
| 36 | GO:0001053: plastid sigma factor activity | 5.75E-04 |
| 37 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.75E-04 |
| 38 | GO:0016987: sigma factor activity | 5.75E-04 |
| 39 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.01E-04 |
| 40 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.29E-04 |
| 41 | GO:0016168: chlorophyll binding | 7.97E-04 |
| 42 | GO:0016688: L-ascorbate peroxidase activity | 8.91E-04 |
| 43 | GO:0004130: cytochrome-c peroxidase activity | 8.91E-04 |
| 44 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.06E-03 |
| 45 | GO:0004601: peroxidase activity | 1.09E-03 |
| 46 | GO:0008235: metalloexopeptidase activity | 1.24E-03 |
| 47 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.51E-03 |
| 48 | GO:0004177: aminopeptidase activity | 2.51E-03 |
| 49 | GO:0015386: potassium:proton antiporter activity | 2.51E-03 |
| 50 | GO:0004519: endonuclease activity | 2.59E-03 |
| 51 | GO:0000049: tRNA binding | 2.75E-03 |
| 52 | GO:0046872: metal ion binding | 3.42E-03 |
| 53 | GO:0047134: protein-disulfide reductase activity | 5.86E-03 |
| 54 | GO:0048038: quinone binding | 7.53E-03 |
| 55 | GO:0008168: methyltransferase activity | 7.53E-03 |
| 56 | GO:0008237: metallopeptidase activity | 8.98E-03 |
| 57 | GO:0016597: amino acid binding | 9.36E-03 |
| 58 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.05E-02 |
| 59 | GO:0004683: calmodulin-dependent protein kinase activity | 1.09E-02 |
| 60 | GO:0008236: serine-type peptidase activity | 1.13E-02 |
| 61 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.13E-02 |
| 62 | GO:0004222: metalloendopeptidase activity | 1.26E-02 |
| 63 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.43E-02 |
| 64 | GO:0009055: electron carrier activity | 1.54E-02 |
| 65 | GO:0005198: structural molecule activity | 1.80E-02 |
| 66 | GO:0051287: NAD binding | 1.90E-02 |
| 67 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.05E-02 |
| 68 | GO:0015035: protein disulfide oxidoreductase activity | 2.69E-02 |
| 69 | GO:0016746: transferase activity, transferring acyl groups | 2.69E-02 |
| 70 | GO:0016787: hydrolase activity | 3.08E-02 |
| 71 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.62E-02 |
| 72 | GO:0042802: identical protein binding | 4.62E-02 |
| 73 | GO:0005509: calcium ion binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.16E-28 |
| 2 | GO:0009941: chloroplast envelope | 5.51E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 5.91E-15 |
| 4 | GO:0009570: chloroplast stroma | 2.15E-10 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 9.12E-10 |
| 6 | GO:0009579: thylakoid | 1.02E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 1.06E-07 |
| 8 | GO:0031977: thylakoid lumen | 4.49E-06 |
| 9 | GO:0010287: plastoglobule | 2.93E-05 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.64E-05 |
| 11 | GO:0009782: photosystem I antenna complex | 7.39E-05 |
| 12 | GO:0030076: light-harvesting complex | 1.70E-04 |
| 13 | GO:0031969: chloroplast membrane | 1.93E-04 |
| 14 | GO:0009512: cytochrome b6f complex | 7.29E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 1.24E-03 |
| 16 | GO:0009501: amyloplast | 1.43E-03 |
| 17 | GO:0016324: apical plasma membrane | 2.28E-03 |
| 18 | GO:0042651: thylakoid membrane | 4.34E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 4.34E-03 |
| 20 | GO:0009532: plastid stroma | 4.63E-03 |
| 21 | GO:0009522: photosystem I | 6.84E-03 |
| 22 | GO:0009523: photosystem II | 7.19E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 7.19E-03 |
| 24 | GO:0010319: stromule | 8.98E-03 |
| 25 | GO:0005874: microtubule | 9.37E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 2.64E-02 |
| 27 | GO:0016020: membrane | 4.76E-02 |