Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G19640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0080094: response to trehalose-6-phosphate0.00E+00
3GO:0009715: chalcone biosynthetic process0.00E+00
4GO:0010336: gibberellic acid homeostasis0.00E+00
5GO:0080167: response to karrikin5.51E-07
6GO:0009813: flavonoid biosynthetic process1.12E-05
7GO:0071555: cell wall organization1.52E-05
8GO:0017148: negative regulation of translation5.10E-05
9GO:0071554: cell wall organization or biogenesis7.86E-05
10GO:0007155: cell adhesion8.88E-05
11GO:0010442: guard cell morphogenesis1.33E-04
12GO:0071370: cellular response to gibberellin stimulus1.33E-04
13GO:1901599: (-)-pinoresinol biosynthetic process1.33E-04
14GO:0006659: phosphatidylserine biosynthetic process1.33E-04
15GO:0000066: mitochondrial ornithine transport1.33E-04
16GO:0019510: S-adenosylhomocysteine catabolic process1.33E-04
17GO:0010597: green leaf volatile biosynthetic process1.33E-04
18GO:1901349: glucosinolate transport1.33E-04
19GO:0090449: phloem glucosinolate loading1.33E-04
20GO:0006169: adenosine salvage1.33E-04
21GO:0030388: fructose 1,6-bisphosphate metabolic process3.07E-04
22GO:0052541: plant-type cell wall cellulose metabolic process3.07E-04
23GO:0015712: hexose phosphate transport3.07E-04
24GO:0009629: response to gravity3.07E-04
25GO:1903338: regulation of cell wall organization or biogenesis3.07E-04
26GO:0033353: S-adenosylmethionine cycle3.07E-04
27GO:0009617: response to bacterium3.28E-04
28GO:0019253: reductive pentose-phosphate cycle3.42E-04
29GO:0035436: triose phosphate transmembrane transport5.06E-04
30GO:0006000: fructose metabolic process5.06E-04
31GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly7.24E-04
32GO:0051016: barbed-end actin filament capping7.24E-04
33GO:0045489: pectin biosynthetic process9.22E-04
34GO:0006021: inositol biosynthetic process9.59E-04
35GO:0006542: glutamine biosynthetic process9.59E-04
36GO:0019676: ammonia assimilation cycle9.59E-04
37GO:0009765: photosynthesis, light harvesting9.59E-04
38GO:0015713: phosphoglycerate transport9.59E-04
39GO:0034440: lipid oxidation9.59E-04
40GO:0006546: glycine catabolic process9.59E-04
41GO:0006810: transport1.11E-03
42GO:0044209: AMP salvage1.21E-03
43GO:0009117: nucleotide metabolic process1.49E-03
44GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.49E-03
45GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.78E-03
46GO:0042026: protein refolding1.78E-03
47GO:0006458: 'de novo' protein folding1.78E-03
48GO:0018298: protein-chromophore linkage2.09E-03
49GO:0050790: regulation of catalytic activity2.09E-03
50GO:0080027: response to herbivore2.09E-03
51GO:0010218: response to far red light2.30E-03
52GO:0045010: actin nucleation2.42E-03
53GO:0031540: regulation of anthocyanin biosynthetic process2.42E-03
54GO:0016051: carbohydrate biosynthetic process2.64E-03
55GO:0006002: fructose 6-phosphate metabolic process2.77E-03
56GO:0022900: electron transport chain2.77E-03
57GO:0048589: developmental growth3.13E-03
58GO:0009056: catabolic process3.13E-03
59GO:0010114: response to red light3.40E-03
60GO:0042546: cell wall biogenesis3.53E-03
61GO:0010192: mucilage biosynthetic process3.89E-03
62GO:0051555: flavonol biosynthetic process3.89E-03
63GO:0000272: polysaccharide catabolic process4.30E-03
64GO:0009773: photosynthetic electron transport in photosystem I4.30E-03
65GO:0009807: lignan biosynthetic process4.30E-03
66GO:0005975: carbohydrate metabolic process4.44E-03
67GO:0046686: response to cadmium ion4.65E-03
68GO:0010224: response to UV-B4.72E-03
69GO:0006857: oligopeptide transport4.88E-03
70GO:0030036: actin cytoskeleton organization5.15E-03
71GO:0050826: response to freezing5.15E-03
72GO:0009725: response to hormone5.15E-03
73GO:0006094: gluconeogenesis5.15E-03
74GO:0005986: sucrose biosynthetic process5.15E-03
75GO:0048768: root hair cell tip growth5.60E-03
76GO:0005985: sucrose metabolic process6.06E-03
77GO:0009833: plant-type primary cell wall biogenesis6.53E-03
78GO:0006071: glycerol metabolic process6.53E-03
79GO:0006833: water transport6.53E-03
80GO:0009753: response to jasmonic acid7.01E-03
81GO:0007010: cytoskeleton organization7.01E-03
82GO:0009695: jasmonic acid biosynthetic process7.51E-03
83GO:0009768: photosynthesis, light harvesting in photosystem I7.51E-03
84GO:0010026: trichome differentiation7.51E-03
85GO:0061077: chaperone-mediated protein folding8.02E-03
86GO:0031408: oxylipin biosynthetic process8.02E-03
87GO:0007005: mitochondrion organization8.55E-03
88GO:0030245: cellulose catabolic process8.55E-03
89GO:0006730: one-carbon metabolic process8.55E-03
90GO:0009294: DNA mediated transformation9.08E-03
91GO:0009411: response to UV9.08E-03
92GO:0006284: base-excision repair9.63E-03
93GO:0006633: fatty acid biosynthetic process1.02E-02
94GO:0000271: polysaccharide biosynthetic process1.08E-02
95GO:0034220: ion transmembrane transport1.08E-02
96GO:0015991: ATP hydrolysis coupled proton transport1.08E-02
97GO:0045490: pectin catabolic process1.12E-02
98GO:0015986: ATP synthesis coupled proton transport1.19E-02
99GO:0007059: chromosome segregation1.19E-02
100GO:0019252: starch biosynthetic process1.25E-02
101GO:0008654: phospholipid biosynthetic process1.25E-02
102GO:0009791: post-embryonic development1.25E-02
103GO:0009611: response to wounding1.37E-02
104GO:0010583: response to cyclopentenone1.38E-02
105GO:0016032: viral process1.38E-02
106GO:0019761: glucosinolate biosynthetic process1.38E-02
107GO:1901657: glycosyl compound metabolic process1.44E-02
108GO:0051301: cell division1.48E-02
109GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.78E-02
110GO:0042128: nitrate assimilation1.85E-02
111GO:0016049: cell growth1.99E-02
112GO:0030244: cellulose biosynthetic process2.06E-02
113GO:0009817: defense response to fungus, incompatible interaction2.06E-02
114GO:0009832: plant-type cell wall biogenesis2.14E-02
115GO:0048767: root hair elongation2.14E-02
116GO:0009407: toxin catabolic process2.21E-02
117GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.24E-02
118GO:0007568: aging2.29E-02
119GO:0009637: response to blue light2.44E-02
120GO:0006839: mitochondrial transport2.68E-02
121GO:0009926: auxin polar transport2.92E-02
122GO:0009744: response to sucrose2.92E-02
123GO:0051707: response to other organism2.92E-02
124GO:0009414: response to water deprivation3.13E-02
125GO:0009636: response to toxic substance3.18E-02
126GO:0006281: DNA repair3.19E-02
127GO:0008152: metabolic process3.52E-02
128GO:0009809: lignin biosynthetic process3.62E-02
129GO:0009733: response to auxin3.72E-02
130GO:0006096: glycolytic process4.07E-02
131GO:0043086: negative regulation of catalytic activity4.07E-02
132GO:0048367: shoot system development4.17E-02
133GO:0009620: response to fungus4.36E-02
134GO:0042545: cell wall modification4.55E-02
135GO:0051726: regulation of cell cycle4.84E-02
RankGO TermAdjusted P value
1GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
2GO:0030598: rRNA N-glycosylase activity0.00E+00
3GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
4GO:0016210: naringenin-chalcone synthase activity0.00E+00
5GO:0045430: chalcone isomerase activity1.47E-05
6GO:0016413: O-acetyltransferase activity1.25E-04
7GO:0090448: glucosinolate:proton symporter activity1.33E-04
8GO:0045486: naringenin 3-dioxygenase activity1.33E-04
9GO:0042349: guiding stereospecific synthesis activity1.33E-04
10GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.33E-04
11GO:0004013: adenosylhomocysteinase activity1.33E-04
12GO:0010313: phytochrome binding1.33E-04
13GO:0004001: adenosine kinase activity1.33E-04
14GO:0016757: transferase activity, transferring glycosyl groups1.42E-04
15GO:0004618: phosphoglycerate kinase activity3.07E-04
16GO:0004047: aminomethyltransferase activity3.07E-04
17GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity3.07E-04
18GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.07E-04
19GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity3.07E-04
20GO:0000064: L-ornithine transmembrane transporter activity3.07E-04
21GO:0004512: inositol-3-phosphate synthase activity3.07E-04
22GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity3.07E-04
23GO:0048531: beta-1,3-galactosyltransferase activity3.07E-04
24GO:0016165: linoleate 13S-lipoxygenase activity5.06E-04
25GO:0071917: triose-phosphate transmembrane transporter activity5.06E-04
26GO:0003913: DNA photolyase activity5.06E-04
27GO:0004148: dihydrolipoyl dehydrogenase activity5.06E-04
28GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity5.06E-04
29GO:0048027: mRNA 5'-UTR binding7.24E-04
30GO:0035529: NADH pyrophosphatase activity7.24E-04
31GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity7.24E-04
32GO:0015120: phosphoglycerate transmembrane transporter activity9.59E-04
33GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor9.59E-04
34GO:0052793: pectin acetylesterase activity9.59E-04
35GO:0046527: glucosyltransferase activity9.59E-04
36GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.21E-03
37GO:0004356: glutamate-ammonia ligase activity1.21E-03
38GO:0045431: flavonol synthase activity1.21E-03
39GO:0008725: DNA-3-methyladenine glycosylase activity1.21E-03
40GO:0016759: cellulose synthase activity1.36E-03
41GO:0080030: methyl indole-3-acetate esterase activity1.49E-03
42GO:0102229: amylopectin maltohydrolase activity1.49E-03
43GO:0042578: phosphoric ester hydrolase activity1.49E-03
44GO:0000210: NAD+ diphosphatase activity1.49E-03
45GO:0016161: beta-amylase activity1.78E-03
46GO:0051753: mannan synthase activity1.78E-03
47GO:0043295: glutathione binding2.09E-03
48GO:0016621: cinnamoyl-CoA reductase activity2.09E-03
49GO:0009881: photoreceptor activity2.09E-03
50GO:0016787: hydrolase activity2.34E-03
51GO:0005215: transporter activity2.55E-03
52GO:0008889: glycerophosphodiester phosphodiesterase activity3.13E-03
53GO:0004575: sucrose alpha-glucosidase activity3.50E-03
54GO:0016740: transferase activity3.95E-03
55GO:0046961: proton-transporting ATPase activity, rotational mechanism4.30E-03
56GO:0044183: protein binding involved in protein folding4.30E-03
57GO:0052689: carboxylic ester hydrolase activity4.44E-03
58GO:0004565: beta-galactosidase activity5.15E-03
59GO:0031409: pigment binding6.53E-03
60GO:0031418: L-ascorbic acid binding7.01E-03
61GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity8.55E-03
62GO:0016760: cellulose synthase (UDP-forming) activity9.08E-03
63GO:0030570: pectate lyase activity9.08E-03
64GO:0008810: cellulase activity9.08E-03
65GO:0004499: N,N-dimethylaniline monooxygenase activity9.63E-03
66GO:0046910: pectinesterase inhibitor activity1.05E-02
67GO:0015297: antiporter activity1.07E-02
68GO:0008017: microtubule binding1.17E-02
69GO:0005355: glucose transmembrane transporter activity1.19E-02
70GO:0019901: protein kinase binding1.25E-02
71GO:0004872: receptor activity1.25E-02
72GO:0048038: quinone binding1.32E-02
73GO:0004518: nuclease activity1.38E-02
74GO:0051015: actin filament binding1.44E-02
75GO:0005200: structural constituent of cytoskeleton1.57E-02
76GO:0008483: transaminase activity1.57E-02
77GO:0015250: water channel activity1.71E-02
78GO:0016788: hydrolase activity, acting on ester bonds1.77E-02
79GO:0016168: chlorophyll binding1.78E-02
80GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.89E-02
81GO:0102483: scopolin beta-glucosidase activity1.92E-02
82GO:0030246: carbohydrate binding1.93E-02
83GO:0050660: flavin adenine dinucleotide binding2.02E-02
84GO:0005507: copper ion binding2.08E-02
85GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.21E-02
86GO:0050897: cobalt ion binding2.29E-02
87GO:0008422: beta-glucosidase activity2.60E-02
88GO:0050661: NADP binding2.68E-02
89GO:0004364: glutathione transferase activity2.84E-02
90GO:0051537: 2 iron, 2 sulfur cluster binding3.09E-02
91GO:0051287: NAD binding3.35E-02
92GO:0003777: microtubule motor activity3.89E-02
93GO:0045330: aspartyl esterase activity3.89E-02
94GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.17E-02
95GO:0080043: quercetin 3-O-glucosyltransferase activity4.36E-02
96GO:0080044: quercetin 7-O-glucosyltransferase activity4.36E-02
97GO:0030599: pectinesterase activity4.45E-02
98GO:0003779: actin binding4.55E-02
99GO:0051082: unfolded protein binding4.65E-02
RankGO TermAdjusted P value
1GO:0097708: intracellular vesicle0.00E+00
2GO:0000940: condensed chromosome outer kinetochore0.00E+00
3GO:0005794: Golgi apparatus2.26E-05
4GO:0031225: anchored component of membrane5.08E-05
5GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.37E-04
6GO:0009579: thylakoid1.68E-04
7GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain3.07E-04
8GO:0046658: anchored component of plasma membrane3.87E-04
9GO:0042406: extrinsic component of endoplasmic reticulum membrane5.06E-04
10GO:0048046: apoplast6.40E-04
11GO:0005775: vacuolar lumen7.24E-04
12GO:0009507: chloroplast9.10E-04
13GO:0009941: chloroplast envelope1.18E-03
14GO:0005576: extracellular region1.47E-03
15GO:0010168: ER body1.49E-03
16GO:0005773: vacuole1.57E-03
17GO:0000325: plant-type vacuole2.41E-03
18GO:0009570: chloroplast stroma2.61E-03
19GO:0009505: plant-type cell wall3.18E-03
20GO:0005876: spindle microtubule3.50E-03
21GO:0000139: Golgi membrane3.64E-03
22GO:0048471: perinuclear region of cytoplasm4.30E-03
23GO:0016020: membrane4.54E-03
24GO:0009506: plasmodesma5.34E-03
25GO:0016021: integral component of membrane5.87E-03
26GO:0005753: mitochondrial proton-transporting ATP synthase complex6.06E-03
27GO:0030076: light-harvesting complex6.06E-03
28GO:0005618: cell wall7.82E-03
29GO:0009535: chloroplast thylakoid membrane8.74E-03
30GO:0009705: plant-type vacuole membrane1.12E-02
31GO:0009522: photosystem I1.19E-02
32GO:0009523: photosystem II1.25E-02
33GO:0022626: cytosolic ribosome1.26E-02
34GO:0005886: plasma membrane1.27E-02
35GO:0009534: chloroplast thylakoid1.69E-02
36GO:0005856: cytoskeleton3.18E-02
37GO:0005747: mitochondrial respiratory chain complex I4.17E-02
Gene type



Gene DE type