co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0030644: cellular chloride ion homeostasis	0.00E+00
3	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
4	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
5	GO:0015833: peptide transport	0.00E+00
6	GO:0006105: succinate metabolic process	0.00E+00
7	GO:0010219: regulation of vernalization response	0.00E+00
8	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
9	GO:0042906: xanthine transport	0.00E+00
10	GO:0042344: indole glucosinolate catabolic process	6.26E-06
11	GO:0046520: sphingoid biosynthetic process	1.88E-04
12	GO:1903409: reactive oxygen species biosynthetic process	1.88E-04
13	GO:0009865: pollen tube adhesion	1.88E-04
14	GO:0006540: glutamate decarboxylation to succinate	1.88E-04
15	GO:0006369: termination of RNA polymerase II transcription	1.88E-04
16	GO:0046167: glycerol-3-phosphate biosynthetic process	1.88E-04
17	GO:0009450: gamma-aminobutyric acid catabolic process	1.88E-04
18	GO:1900060: negative regulation of ceramide biosynthetic process	1.88E-04
19	GO:1990641: response to iron ion starvation	1.88E-04
20	GO:0071366: cellular response to indolebutyric acid stimulus	1.88E-04
21	GO:0010286: heat acclimation	2.25E-04
22	GO:0009970: cellular response to sulfate starvation	3.21E-04
23	GO:0052544: defense response by callose deposition in cell wall	3.73E-04
24	GO:1902884: positive regulation of response to oxidative stress	4.24E-04
25	GO:0006101: citrate metabolic process	4.24E-04
26	GO:0042939: tripeptide transport	4.24E-04
27	GO:0009308: amine metabolic process	4.24E-04
28	GO:0090156: cellular sphingolipid homeostasis	4.24E-04
29	GO:0015720: allantoin transport	4.24E-04
30	GO:0032509: endosome transport via multivesicular body sorting pathway	4.24E-04
31	GO:0010033: response to organic substance	4.24E-04
32	GO:0006883: cellular sodium ion homeostasis	4.24E-04
33	GO:0048833: specification of floral organ number	4.24E-04
34	GO:0006641: triglyceride metabolic process	4.24E-04
35	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	4.24E-04
36	GO:0015857: uracil transport	4.24E-04
37	GO:0034976: response to endoplasmic reticulum stress	6.80E-04
38	GO:0006954: inflammatory response	6.92E-04
39	GO:0019563: glycerol catabolic process	6.92E-04
40	GO:0071705: nitrogen compound transport	6.92E-04
41	GO:1901562: response to paraquat	6.92E-04
42	GO:0030029: actin filament-based process	6.92E-04
43	GO:0009963: positive regulation of flavonoid biosynthetic process	9.86E-04
44	GO:1901332: negative regulation of lateral root development	9.86E-04
45	GO:0006882: cellular zinc ion homeostasis	9.86E-04
46	GO:0000578: embryonic axis specification	9.86E-04
47	GO:0006624: vacuolar protein processing	9.86E-04
48	GO:0006020: inositol metabolic process	9.86E-04
49	GO:0010601: positive regulation of auxin biosynthetic process	9.86E-04
50	GO:0006072: glycerol-3-phosphate metabolic process	9.86E-04
51	GO:0015749: monosaccharide transport	9.86E-04
52	GO:0006809: nitric oxide biosynthetic process	9.86E-04
53	GO:0051603: proteolysis involved in cellular protein catabolic process	1.06E-03
54	GO:0048443: stamen development	1.16E-03
55	GO:0010188: response to microbial phytotoxin	1.31E-03
56	GO:0006878: cellular copper ion homeostasis	1.31E-03
57	GO:0042938: dipeptide transport	1.31E-03
58	GO:0048442: sepal development	1.31E-03
59	GO:0006536: glutamate metabolic process	1.31E-03
60	GO:0010600: regulation of auxin biosynthetic process	1.31E-03
61	GO:1901002: positive regulation of response to salt stress	1.31E-03
62	GO:0042742: defense response to bacterium	1.36E-03
63	GO:0016192: vesicle-mediated transport	1.53E-03
64	GO:0043097: pyrimidine nucleoside salvage	1.66E-03
65	GO:0007165: signal transduction	1.80E-03
66	GO:0006635: fatty acid beta-oxidation	1.80E-03
67	GO:0000741: karyogamy	2.05E-03
68	GO:0015691: cadmium ion transport	2.05E-03
69	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.05E-03
70	GO:0042732: D-xylose metabolic process	2.05E-03
71	GO:0006206: pyrimidine nucleobase metabolic process	2.05E-03
72	GO:0031930: mitochondria-nucleus signaling pathway	2.46E-03
73	GO:0006694: steroid biosynthetic process	2.46E-03
74	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.46E-03
75	GO:0009409: response to cold	2.48E-03
76	GO:0010044: response to aluminum ion	2.90E-03
77	GO:0009395: phospholipid catabolic process	2.90E-03
78	GO:0048437: floral organ development	2.90E-03
79	GO:0006102: isocitrate metabolic process	3.36E-03
80	GO:0016559: peroxisome fission	3.36E-03
81	GO:0006644: phospholipid metabolic process	3.36E-03
82	GO:0009061: anaerobic respiration	3.36E-03
83	GO:0010928: regulation of auxin mediated signaling pathway	3.36E-03
84	GO:0009817: defense response to fungus, incompatible interaction	3.36E-03
85	GO:0010468: regulation of gene expression	3.95E-03
86	GO:0046916: cellular transition metal ion homeostasis	4.35E-03
87	GO:0006098: pentose-phosphate shunt	4.35E-03
88	GO:0006099: tricarboxylic acid cycle	4.45E-03
89	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.87E-03
90	GO:0042542: response to hydrogen peroxide	5.26E-03
91	GO:0048441: petal development	5.42E-03
92	GO:0006535: cysteine biosynthetic process from serine	5.42E-03
93	GO:0009641: shade avoidance	5.42E-03
94	GO:0006995: cellular response to nitrogen starvation	5.42E-03
95	GO:0055062: phosphate ion homeostasis	5.42E-03
96	GO:0009640: photomorphogenesis	5.48E-03
97	GO:0030148: sphingolipid biosynthetic process	5.99E-03
98	GO:0006378: mRNA polyadenylation	5.99E-03
99	GO:0009682: induced systemic resistance	5.99E-03
100	GO:0035556: intracellular signal transduction	6.63E-03
101	GO:0000165: MAPK cascade	6.63E-03
102	GO:0050826: response to freezing	7.19E-03
103	GO:0080167: response to karrikin	7.22E-03
104	GO:0007034: vacuolar transport	7.82E-03
105	GO:0048440: carpel development	7.82E-03
106	GO:0006541: glutamine metabolic process	7.82E-03
107	GO:0002237: response to molecule of bacterial origin	7.82E-03
108	GO:0007031: peroxisome organization	8.47E-03
109	GO:0005985: sucrose metabolic process	8.47E-03
110	GO:0048367: shoot system development	9.02E-03
111	GO:0045333: cellular respiration	9.83E-03
112	GO:0019344: cysteine biosynthetic process	9.83E-03
113	GO:0016575: histone deacetylation	1.05E-02
114	GO:0006396: RNA processing	1.08E-02
115	GO:0010431: seed maturation	1.13E-02
116	GO:0009269: response to desiccation	1.13E-02
117	GO:0009408: response to heat	1.19E-02
118	GO:0031348: negative regulation of defense response	1.20E-02
119	GO:0040007: growth	1.28E-02
120	GO:0009693: ethylene biosynthetic process	1.28E-02
121	GO:0071215: cellular response to abscisic acid stimulus	1.28E-02
122	GO:0009651: response to salt stress	1.46E-02
123	GO:0042391: regulation of membrane potential	1.51E-02
124	GO:0080022: primary root development	1.51E-02
125	GO:0015991: ATP hydrolysis coupled proton transport	1.51E-02
126	GO:0042631: cellular response to water deprivation	1.51E-02
127	GO:0010197: polar nucleus fusion	1.60E-02
128	GO:0046323: glucose import	1.60E-02
129	GO:0009960: endosperm development	1.60E-02
130	GO:0010154: fruit development	1.60E-02
131	GO:0048544: recognition of pollen	1.68E-02
132	GO:0006814: sodium ion transport	1.68E-02
133	GO:0008654: phospholipid biosynthetic process	1.77E-02
134	GO:0009556: microsporogenesis	1.77E-02
135	GO:0010183: pollen tube guidance	1.77E-02
136	GO:0010150: leaf senescence	1.83E-02
137	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.85E-02
138	GO:0007166: cell surface receptor signaling pathway	2.09E-02
139	GO:0006914: autophagy	2.13E-02
140	GO:0019760: glucosinolate metabolic process	2.13E-02
141	GO:0010252: auxin homeostasis	2.13E-02
142	GO:0009617: response to bacterium	2.18E-02
143	GO:0016310: phosphorylation	2.36E-02
144	GO:0016126: sterol biosynthetic process	2.41E-02
145	GO:0015031: protein transport	2.53E-02
146	GO:0009627: systemic acquired resistance	2.61E-02
147	GO:0048573: photoperiodism, flowering	2.71E-02
148	GO:0006950: response to stress	2.71E-02
149	GO:0009813: flavonoid biosynthetic process	3.02E-02
150	GO:0006970: response to osmotic stress	3.04E-02
151	GO:0006811: ion transport	3.12E-02
152	GO:0006865: amino acid transport	3.34E-02
153	GO:0055114: oxidation-reduction process	3.40E-02
154	GO:0006511: ubiquitin-dependent protein catabolic process	3.58E-02
155	GO:0030001: metal ion transport	3.78E-02
156	GO:0051707: response to other organism	4.13E-02
157	GO:0045454: cell redox homeostasis	4.18E-02
158	GO:0009644: response to high light intensity	4.36E-02
159	GO:0008643: carbohydrate transport	4.36E-02
160	GO:0006855: drug transmembrane transport	4.60E-02
161	GO:0042538: hyperosmotic salinity response	4.85E-02
162	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
5	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
6	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
7	GO:0009045: xylose isomerase activity	0.00E+00
8	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
9	GO:0015197: peptide transporter activity	0.00E+00
10	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
11	GO:0050897: cobalt ion binding	3.57E-05
12	GO:0004525: ribonuclease III activity	1.51E-04
13	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.88E-04
14	GO:0050200: plasmalogen synthase activity	1.88E-04
15	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.88E-04
16	GO:0052595: aliphatic-amine oxidase activity	1.88E-04
17	GO:0009679: hexose:proton symporter activity	1.88E-04
18	GO:0000170: sphingosine hydroxylase activity	1.88E-04
19	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.88E-04
20	GO:0001530: lipopolysaccharide binding	1.88E-04
21	GO:0046870: cadmium ion binding	1.88E-04
22	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.88E-04
23	GO:0003867: 4-aminobutyrate transaminase activity	1.88E-04
24	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	4.24E-04
25	GO:0019200: carbohydrate kinase activity	4.24E-04
26	GO:0042937: tripeptide transporter activity	4.24E-04
27	GO:0004566: beta-glucuronidase activity	4.24E-04
28	GO:0032791: lead ion binding	4.24E-04
29	GO:0005274: allantoin uptake transmembrane transporter activity	4.24E-04
30	GO:0003994: aconitate hydratase activity	4.24E-04
31	GO:0042284: sphingolipid delta-4 desaturase activity	4.24E-04
32	GO:0004096: catalase activity	6.92E-04
33	GO:0017150: tRNA dihydrouridine synthase activity	6.92E-04
34	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.92E-04
35	GO:0004707: MAP kinase activity	9.07E-04
36	GO:0015086: cadmium ion transmembrane transporter activity	9.86E-04
37	GO:0004108: citrate (Si)-synthase activity	9.86E-04
38	GO:0008508: bile acid:sodium symporter activity	9.86E-04
39	GO:0009001: serine O-acetyltransferase activity	9.86E-04
40	GO:0048027: mRNA 5'-UTR binding	9.86E-04
41	GO:0003995: acyl-CoA dehydrogenase activity	1.31E-03
42	GO:0009916: alternative oxidase activity	1.31E-03
43	GO:0042936: dipeptide transporter activity	1.31E-03
44	GO:0015210: uracil transmembrane transporter activity	1.31E-03
45	GO:0008198: ferrous iron binding	1.66E-03
46	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.66E-03
47	GO:0003997: acyl-CoA oxidase activity	1.66E-03
48	GO:0015145: monosaccharide transmembrane transporter activity	1.66E-03
49	GO:0004197: cysteine-type endopeptidase activity	1.92E-03
50	GO:0019137: thioglucosidase activity	2.05E-03
51	GO:0004629: phospholipase C activity	2.05E-03
52	GO:0004849: uridine kinase activity	2.46E-03
53	GO:0004435: phosphatidylinositol phospholipase C activity	2.46E-03
54	GO:0070300: phosphatidic acid binding	2.46E-03
55	GO:0016301: kinase activity	2.84E-03
56	GO:0001104: RNA polymerase II transcription cofactor activity	3.84E-03
57	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.84E-03
58	GO:0000989: transcription factor activity, transcription factor binding	4.35E-03
59	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.35E-03
60	GO:0005215: transporter activity	5.99E-03
61	GO:0008081: phosphoric diester hydrolase activity	7.19E-03
62	GO:0008131: primary amine oxidase activity	7.82E-03
63	GO:0004175: endopeptidase activity	7.82E-03
64	GO:0030552: cAMP binding	8.47E-03
65	GO:0030553: cGMP binding	8.47E-03
66	GO:0004407: histone deacetylase activity	9.83E-03
67	GO:0043424: protein histidine kinase binding	1.05E-02
68	GO:0005216: ion channel activity	1.05E-02
69	GO:0003756: protein disulfide isomerase activity	1.35E-02
70	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.36E-02
71	GO:0005249: voltage-gated potassium channel activity	1.51E-02
72	GO:0030551: cyclic nucleotide binding	1.51E-02
73	GO:0005351: sugar:proton symporter activity	1.78E-02
74	GO:0048038: quinone binding	1.85E-02
75	GO:0008237: metallopeptidase activity	2.22E-02
76	GO:0005200: structural constituent of cytoskeleton	2.22E-02
77	GO:0051213: dioxygenase activity	2.41E-02
78	GO:0030247: polysaccharide binding	2.71E-02
79	GO:0102483: scopolin beta-glucosidase activity	2.71E-02
80	GO:0004806: triglyceride lipase activity	2.71E-02
81	GO:0005524: ATP binding	2.88E-02
82	GO:0005096: GTPase activator activity	3.02E-02
83	GO:0004222: metalloendopeptidase activity	3.12E-02
84	GO:0050660: flavin adenine dinucleotide binding	3.27E-02
85	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.45E-02
86	GO:0004497: monooxygenase activity	3.50E-02
87	GO:0003993: acid phosphatase activity	3.56E-02
88	GO:0008422: beta-glucosidase activity	3.67E-02
89	GO:0051539: 4 iron, 4 sulfur cluster binding	3.78E-02
90	GO:0005507: copper ion binding	3.80E-02
91	GO:0008270: zinc ion binding	4.15E-02
92	GO:0005515: protein binding	4.28E-02
93	GO:0035091: phosphatidylinositol binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0005773: vacuole	3.82E-07
2	GO:0005777: peroxisome	1.21E-06
3	GO:0016021: integral component of membrane	5.90E-06
4	GO:0000323: lytic vacuole	1.44E-05
5	GO:0005783: endoplasmic reticulum	1.65E-04
6	GO:0010008: endosome membrane	1.70E-04
7	GO:0005774: vacuolar membrane	1.81E-04
8	GO:0035339: SPOTS complex	1.88E-04
9	GO:0005886: plasma membrane	2.80E-04
10	GO:0005849: mRNA cleavage factor complex	9.86E-04
11	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.31E-03
12	GO:0005776: autophagosome	1.31E-03
13	GO:0009898: cytoplasmic side of plasma membrane	1.31E-03
14	GO:0032586: protein storage vacuole membrane	1.31E-03
15	GO:0070847: core mediator complex	2.05E-03
16	GO:0005794: Golgi apparatus	3.46E-03
17	GO:0005615: extracellular space	3.64E-03
18	GO:0000326: protein storage vacuole	3.84E-03
19	GO:0009514: glyoxysome	3.84E-03
20	GO:0005779: integral component of peroxisomal membrane	3.84E-03
21	GO:0005765: lysosomal membrane	5.99E-03
22	GO:0016020: membrane	6.12E-03
23	GO:0005764: lysosome	7.82E-03
24	GO:0009506: plasmodesma	7.90E-03
25	GO:0070469: respiratory chain	1.05E-02
26	GO:0031410: cytoplasmic vesicle	1.20E-02
27	GO:0031965: nuclear membrane	1.77E-02
28	GO:0009705: plant-type vacuole membrane	1.83E-02
29	GO:0016592: mediator complex	1.94E-02
30	GO:0005778: peroxisomal membrane	2.22E-02
31	GO:0000325: plant-type vacuole	3.23E-02
32	GO:0005789: endoplasmic reticulum membrane	3.32E-02
33	GO:0000786: nucleosome	3.34E-02