co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010398: xylogalacturonan metabolic process	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0043269: regulation of ion transport	0.00E+00
5	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
6	GO:0006105: succinate metabolic process	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0010360: negative regulation of anion channel activity	0.00E+00
9	GO:0032497: detection of lipopolysaccharide	0.00E+00
10	GO:0019484: beta-alanine catabolic process	0.00E+00
11	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
12	GO:0000162: tryptophan biosynthetic process	2.96E-05
13	GO:0006014: D-ribose metabolic process	5.77E-05
14	GO:1900425: negative regulation of defense response to bacterium	5.77E-05
15	GO:0048544: recognition of pollen	1.14E-04
16	GO:0016559: peroxisome fission	1.37E-04
17	GO:0046167: glycerol-3-phosphate biosynthetic process	1.77E-04
18	GO:0035266: meristem growth	1.77E-04
19	GO:0009450: gamma-aminobutyric acid catabolic process	1.77E-04
20	GO:0007292: female gamete generation	1.77E-04
21	GO:0006481: C-terminal protein methylation	1.77E-04
22	GO:0010941: regulation of cell death	1.77E-04
23	GO:1902361: mitochondrial pyruvate transmembrane transport	1.77E-04
24	GO:0009865: pollen tube adhesion	1.77E-04
25	GO:0032469: endoplasmic reticulum calcium ion homeostasis	1.77E-04
26	GO:0006540: glutamate decarboxylation to succinate	1.77E-04
27	GO:0000266: mitochondrial fission	3.93E-04
28	GO:0019441: tryptophan catabolic process to kynurenine	4.01E-04
29	GO:0010033: response to organic substance	4.01E-04
30	GO:0015804: neutral amino acid transport	4.01E-04
31	GO:0006641: triglyceride metabolic process	4.01E-04
32	GO:0009727: detection of ethylene stimulus	4.01E-04
33	GO:0051788: response to misfolded protein	4.01E-04
34	GO:0006850: mitochondrial pyruvate transport	4.01E-04
35	GO:0015865: purine nucleotide transport	4.01E-04
36	GO:0052542: defense response by callose deposition	4.01E-04
37	GO:0045087: innate immune response	4.59E-04
38	GO:0071398: cellular response to fatty acid	6.55E-04
39	GO:0060968: regulation of gene silencing	6.55E-04
40	GO:0006954: inflammatory response	6.55E-04
41	GO:0019563: glycerol catabolic process	6.55E-04
42	GO:0046686: response to cadmium ion	7.94E-04
43	GO:0019438: aromatic compound biosynthetic process	9.34E-04
44	GO:0006020: inositol metabolic process	9.34E-04
45	GO:0046902: regulation of mitochondrial membrane permeability	9.34E-04
46	GO:0072334: UDP-galactose transmembrane transport	9.34E-04
47	GO:0006072: glycerol-3-phosphate metabolic process	9.34E-04
48	GO:0009399: nitrogen fixation	9.34E-04
49	GO:0071786: endoplasmic reticulum tubular network organization	9.34E-04
50	GO:0006012: galactose metabolic process	9.92E-04
51	GO:0071215: cellular response to abscisic acid stimulus	9.92E-04
52	GO:0048367: shoot system development	1.17E-03
53	GO:0010188: response to microbial phytotoxin	1.24E-03
54	GO:0006542: glutamine biosynthetic process	1.24E-03
55	GO:0010222: stem vascular tissue pattern formation	1.24E-03
56	GO:1902584: positive regulation of response to water deprivation	1.24E-03
57	GO:0006536: glutamate metabolic process	1.24E-03
58	GO:0010600: regulation of auxin biosynthetic process	1.24E-03
59	GO:0042631: cellular response to water deprivation	1.25E-03
60	GO:0019252: starch biosynthetic process	1.55E-03
61	GO:0009851: auxin biosynthetic process	1.55E-03
62	GO:0007029: endoplasmic reticulum organization	1.57E-03
63	GO:0010583: response to cyclopentenone	1.76E-03
64	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.94E-03
65	GO:0006354: DNA-templated transcription, elongation	1.94E-03
66	GO:0048827: phyllome development	1.94E-03
67	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.94E-03
68	GO:0048232: male gamete generation	1.94E-03
69	GO:0043248: proteasome assembly	1.94E-03
70	GO:0009267: cellular response to starvation	1.94E-03
71	GO:0010337: regulation of salicylic acid metabolic process	1.94E-03
72	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.32E-03
73	GO:0001666: response to hypoxia	2.38E-03
74	GO:0006955: immune response	2.74E-03
75	GO:0046470: phosphatidylcholine metabolic process	2.74E-03
76	GO:0070370: cellular heat acclimation	2.74E-03
77	GO:0006333: chromatin assembly or disassembly	2.74E-03
78	GO:0010150: leaf senescence	2.84E-03
79	GO:0008219: cell death	3.09E-03
80	GO:2000070: regulation of response to water deprivation	3.17E-03
81	GO:1900150: regulation of defense response to fungus	3.17E-03
82	GO:0010078: maintenance of root meristem identity	3.17E-03
83	GO:0010311: lateral root formation	3.25E-03
84	GO:0009617: response to bacterium	3.55E-03
85	GO:0009808: lignin metabolic process	3.63E-03
86	GO:0006972: hyperosmotic response	3.63E-03
87	GO:0006379: mRNA cleavage	4.10E-03
88	GO:0090333: regulation of stomatal closure	4.10E-03
89	GO:0042742: defense response to bacterium	4.32E-03
90	GO:0008202: steroid metabolic process	4.60E-03
91	GO:0043069: negative regulation of programmed cell death	5.11E-03
92	GO:0048829: root cap development	5.11E-03
93	GO:0006535: cysteine biosynthetic process from serine	5.11E-03
94	GO:0030148: sphingolipid biosynthetic process	5.65E-03
95	GO:0006378: mRNA polyadenylation	5.65E-03
96	GO:0010015: root morphogenesis	5.65E-03
97	GO:0052544: defense response by callose deposition in cell wall	5.65E-03
98	GO:0071365: cellular response to auxin stimulus	6.20E-03
99	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.77E-03
100	GO:0006813: potassium ion transport	6.78E-03
101	GO:0006807: nitrogen compound metabolic process	6.78E-03
102	GO:0046777: protein autophosphorylation	7.06E-03
103	GO:0034605: cellular response to heat	7.37E-03
104	GO:0006541: glutamine metabolic process	7.37E-03
105	GO:0002237: response to molecule of bacterial origin	7.37E-03
106	GO:0009933: meristem structural organization	7.37E-03
107	GO:0090351: seedling development	7.98E-03
108	GO:0010030: positive regulation of seed germination	7.98E-03
109	GO:0009225: nucleotide-sugar metabolic process	7.98E-03
110	GO:0007031: peroxisome organization	7.98E-03
111	GO:0010167: response to nitrate	7.98E-03
112	GO:0005985: sucrose metabolic process	7.98E-03
113	GO:0071732: cellular response to nitric oxide	7.98E-03
114	GO:0045454: cell redox homeostasis	8.16E-03
115	GO:0009626: plant-type hypersensitive response	8.55E-03
116	GO:0019344: cysteine biosynthetic process	9.26E-03
117	GO:0006825: copper ion transport	9.92E-03
118	GO:0006468: protein phosphorylation	9.98E-03
119	GO:0003333: amino acid transmembrane transport	1.06E-02
120	GO:0031408: oxylipin biosynthetic process	1.06E-02
121	GO:0048364: root development	1.12E-02
122	GO:0007005: mitochondrion organization	1.13E-02
123	GO:0071456: cellular response to hypoxia	1.13E-02
124	GO:0035428: hexose transmembrane transport	1.13E-02
125	GO:0030433: ubiquitin-dependent ERAD pathway	1.13E-02
126	GO:0009693: ethylene biosynthetic process	1.20E-02
127	GO:0015991: ATP hydrolysis coupled proton transport	1.43E-02
128	GO:0046323: glucose import	1.50E-02
129	GO:0045489: pectin biosynthetic process	1.50E-02
130	GO:0006885: regulation of pH	1.50E-02
131	GO:0006520: cellular amino acid metabolic process	1.50E-02
132	GO:0010154: fruit development	1.50E-02
133	GO:0009646: response to absence of light	1.58E-02
134	GO:0006979: response to oxidative stress	1.58E-02
135	GO:0009734: auxin-activated signaling pathway	1.64E-02
136	GO:0010183: pollen tube guidance	1.66E-02
137	GO:0009749: response to glucose	1.66E-02
138	GO:0006635: fatty acid beta-oxidation	1.75E-02
139	GO:0002229: defense response to oomycetes	1.75E-02
140	GO:0009630: gravitropism	1.83E-02
141	GO:0009733: response to auxin	1.86E-02
142	GO:0071281: cellular response to iron ion	1.91E-02
143	GO:0071805: potassium ion transmembrane transport	2.09E-02
144	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
145	GO:0051607: defense response to virus	2.18E-02
146	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.36E-02
147	GO:0042128: nitrate assimilation	2.45E-02
148	GO:0009826: unidimensional cell growth	2.50E-02
149	GO:0048573: photoperiodism, flowering	2.55E-02
150	GO:0006950: response to stress	2.55E-02
151	GO:0055114: oxidation-reduction process	2.71E-02
152	GO:0009813: flavonoid biosynthetic process	2.84E-02
153	GO:0006499: N-terminal protein myristoylation	2.94E-02
154	GO:0010043: response to zinc ion	3.04E-02
155	GO:0007568: aging	3.04E-02
156	GO:0006865: amino acid transport	3.14E-02
157	GO:0080167: response to karrikin	3.22E-02
158	GO:0016051: carbohydrate biosynthetic process	3.24E-02
159	GO:0009651: response to salt stress	3.45E-02
160	GO:0006839: mitochondrial transport	3.56E-02
161	GO:0042542: response to hydrogen peroxide	3.78E-02
162	GO:0051707: response to other organism	3.88E-02
163	GO:0009636: response to toxic substance	4.22E-02
164	GO:0009965: leaf morphogenesis	4.22E-02
165	GO:0031347: regulation of defense response	4.45E-02
166	GO:0006812: cation transport	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
3	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
4	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
5	GO:0004370: glycerol kinase activity	0.00E+00
6	GO:0004834: tryptophan synthase activity	2.40E-05
7	GO:0004747: ribokinase activity	8.05E-05
8	GO:0030246: carbohydrate binding	1.03E-04
9	GO:0004034: aldose 1-epimerase activity	1.37E-04
10	GO:0008865: fructokinase activity	1.37E-04
11	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.77E-04
12	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.77E-04
13	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.77E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.77E-04
15	GO:0003867: 4-aminobutyrate transaminase activity	1.77E-04
16	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.77E-04
17	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.09E-04
18	GO:0016301: kinase activity	3.54E-04
19	GO:0005524: ATP binding	3.73E-04
20	GO:0047209: coniferyl-alcohol glucosyltransferase activity	4.01E-04
21	GO:0015172: acidic amino acid transmembrane transporter activity	4.01E-04
22	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	4.01E-04
23	GO:0004566: beta-glucuronidase activity	4.01E-04
24	GO:0045140: inositol phosphoceramide synthase activity	4.01E-04
25	GO:0004142: diacylglycerol cholinephosphotransferase activity	4.01E-04
26	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.01E-04
27	GO:0004352: glutamate dehydrogenase (NAD+) activity	4.01E-04
28	GO:0004061: arylformamidase activity	4.01E-04
29	GO:0019200: carbohydrate kinase activity	4.01E-04
30	GO:0050897: cobalt ion binding	4.07E-04
31	GO:0004383: guanylate cyclase activity	6.55E-04
32	GO:0016595: glutamate binding	6.55E-04
33	GO:0004049: anthranilate synthase activity	6.55E-04
34	GO:0008430: selenium binding	6.55E-04
35	GO:0016531: copper chaperone activity	6.55E-04
36	GO:0050833: pyruvate transmembrane transporter activity	6.55E-04
37	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.55E-04
38	GO:0004300: enoyl-CoA hydratase activity	9.34E-04
39	GO:0015175: neutral amino acid transmembrane transporter activity	9.34E-04
40	GO:0001653: peptide receptor activity	9.34E-04
41	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	9.34E-04
42	GO:0030527: structural constituent of chromatin	9.34E-04
43	GO:0004674: protein serine/threonine kinase activity	1.21E-03
44	GO:0004737: pyruvate decarboxylase activity	1.24E-03
45	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.24E-03
46	GO:0050378: UDP-glucuronate 4-epimerase activity	1.24E-03
47	GO:0015035: protein disulfide oxidoreductase activity	1.47E-03
48	GO:0005471: ATP:ADP antiporter activity	1.57E-03
49	GO:0004356: glutamate-ammonia ligase activity	1.57E-03
50	GO:0045431: flavonol synthase activity	1.57E-03
51	GO:0005459: UDP-galactose transmembrane transporter activity	1.57E-03
52	GO:0036402: proteasome-activating ATPase activity	1.94E-03
53	GO:0030976: thiamine pyrophosphate binding	1.94E-03
54	GO:0035252: UDP-xylosyltransferase activity	1.94E-03
55	GO:0004124: cysteine synthase activity	2.32E-03
56	GO:0004602: glutathione peroxidase activity	2.32E-03
57	GO:0004620: phospholipase activity	2.74E-03
58	GO:0016831: carboxy-lyase activity	2.74E-03
59	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.17E-03
60	GO:0008142: oxysterol binding	3.63E-03
61	GO:0071949: FAD binding	4.10E-03
62	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.60E-03
63	GO:0008171: O-methyltransferase activity	5.11E-03
64	GO:0004713: protein tyrosine kinase activity	5.11E-03
65	GO:0047372: acylglycerol lipase activity	5.65E-03
66	GO:0008794: arsenate reductase (glutaredoxin) activity	5.65E-03
67	GO:0008233: peptidase activity	6.35E-03
68	GO:0005262: calcium channel activity	6.78E-03
69	GO:0031625: ubiquitin protein ligase binding	7.51E-03
70	GO:0017025: TBP-class protein binding	7.98E-03
71	GO:0004672: protein kinase activity	8.45E-03
72	GO:0005507: copper ion binding	9.18E-03
73	GO:0031418: L-ascorbic acid binding	9.26E-03
74	GO:0043424: protein histidine kinase binding	9.92E-03
75	GO:0015079: potassium ion transmembrane transporter activity	9.92E-03
76	GO:0009055: electron carrier activity	1.16E-02
77	GO:0030170: pyridoxal phosphate binding	1.35E-02
78	GO:0005451: monovalent cation:proton antiporter activity	1.43E-02
79	GO:0016853: isomerase activity	1.58E-02
80	GO:0015299: solute:proton antiporter activity	1.58E-02
81	GO:0005355: glucose transmembrane transporter activity	1.58E-02
82	GO:0010181: FMN binding	1.58E-02
83	GO:0050662: coenzyme binding	1.58E-02
84	GO:0003824: catalytic activity	1.79E-02
85	GO:0015385: sodium:proton antiporter activity	1.91E-02
86	GO:0016791: phosphatase activity	2.00E-02
87	GO:0042802: identical protein binding	2.13E-02
88	GO:0016597: amino acid binding	2.18E-02
89	GO:0051213: dioxygenase activity	2.27E-02
90	GO:0016491: oxidoreductase activity	2.35E-02
91	GO:0004721: phosphoprotein phosphatase activity	2.55E-02
92	GO:0030247: polysaccharide binding	2.55E-02
93	GO:0008236: serine-type peptidase activity	2.64E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.64E-02
95	GO:0030145: manganese ion binding	3.04E-02
96	GO:0004364: glutathione transferase activity	3.78E-02
97	GO:0051537: 2 iron, 2 sulfur cluster binding	4.11E-02
98	GO:0015293: symporter activity	4.22E-02
99	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.80E-02
100	GO:0016298: lipase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.75E-06
2	GO:0005886: plasma membrane	6.51E-05
3	GO:0005794: Golgi apparatus	1.65E-04
4	GO:0005783: endoplasmic reticulum	3.86E-04
5	GO:0005950: anthranilate synthase complex	4.01E-04
6	GO:0030176: integral component of endoplasmic reticulum membrane	5.64E-04
7	GO:0071782: endoplasmic reticulum tubular network	9.34E-04
8	GO:0005849: mRNA cleavage factor complex	9.34E-04
9	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.24E-03
10	GO:0005777: peroxisome	1.59E-03
11	GO:0005778: peroxisomal membrane	2.12E-03
12	GO:0031597: cytosolic proteasome complex	2.32E-03
13	GO:0030173: integral component of Golgi membrane	2.32E-03
14	GO:0031595: nuclear proteasome complex	2.74E-03
15	GO:0005802: trans-Golgi network	2.87E-03
16	GO:0031305: integral component of mitochondrial inner membrane	3.17E-03
17	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.17E-03
18	GO:0005779: integral component of peroxisomal membrane	3.63E-03
19	GO:0008540: proteasome regulatory particle, base subcomplex	4.60E-03
20	GO:0005765: lysosomal membrane	5.65E-03
21	GO:0016020: membrane	8.96E-03
22	GO:0005758: mitochondrial intermembrane space	9.26E-03
23	GO:0005741: mitochondrial outer membrane	1.06E-02
24	GO:0005768: endosome	1.33E-02
25	GO:0005618: cell wall	1.70E-02
26	GO:0000785: chromatin	1.83E-02
27	GO:0032580: Golgi cisterna membrane	2.00E-02
28	GO:0005789: endoplasmic reticulum membrane	2.93E-02
29	GO:0005773: vacuole	2.95E-02
30	GO:0000325: plant-type vacuole	3.04E-02
31	GO:0009506: plasmodesma	3.33E-02
32	GO:0005774: vacuolar membrane	3.63E-02
33	GO:0005743: mitochondrial inner membrane	4.40E-02
34	GO:0005829: cytosol	4.42E-02
35	GO:0000502: proteasome complex	4.80E-02