Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006066: alcohol metabolic process0.00E+00
2GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
3GO:0045176: apical protein localization0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0015805: S-adenosyl-L-methionine transport0.00E+00
6GO:0061635: regulation of protein complex stability0.00E+00
7GO:0042821: pyridoxal biosynthetic process0.00E+00
8GO:0007638: mechanosensory behavior0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:2001294: malonyl-CoA catabolic process0.00E+00
11GO:0042493: response to drug0.00E+00
12GO:0015979: photosynthesis3.56E-13
13GO:0009773: photosynthetic electron transport in photosystem I3.87E-10
14GO:0032544: plastid translation4.05E-07
15GO:0010027: thylakoid membrane organization9.31E-06
16GO:0006518: peptide metabolic process2.60E-05
17GO:0009735: response to cytokinin4.16E-05
18GO:2000122: negative regulation of stomatal complex development9.96E-05
19GO:0010037: response to carbon dioxide9.96E-05
20GO:0015976: carbon utilization9.96E-05
21GO:0018298: protein-chromophore linkage2.14E-04
22GO:0010190: cytochrome b6f complex assembly2.21E-04
23GO:0009658: chloroplast organization3.05E-04
24GO:0042254: ribosome biogenesis3.17E-04
25GO:0010196: nonphotochemical quenching3.84E-04
26GO:0009443: pyridoxal 5'-phosphate salvage4.10E-04
27GO:1904966: positive regulation of vitamin E biosynthetic process4.10E-04
28GO:0071277: cellular response to calcium ion4.10E-04
29GO:0000481: maturation of 5S rRNA4.10E-04
30GO:1904964: positive regulation of phytol biosynthetic process4.10E-04
31GO:0033481: galacturonate biosynthetic process4.10E-04
32GO:0042371: vitamin K biosynthetic process4.10E-04
33GO:1902458: positive regulation of stomatal opening4.10E-04
34GO:0034337: RNA folding4.10E-04
35GO:0071588: hydrogen peroxide mediated signaling pathway4.10E-04
36GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.10E-04
37GO:0042335: cuticle development4.86E-04
38GO:0009657: plastid organization5.86E-04
39GO:0046741: transport of virus in host, tissue to tissue8.88E-04
40GO:0010115: regulation of abscisic acid biosynthetic process8.88E-04
41GO:1902326: positive regulation of chlorophyll biosynthetic process8.88E-04
42GO:1900033: negative regulation of trichome patterning8.88E-04
43GO:1903426: regulation of reactive oxygen species biosynthetic process8.88E-04
44GO:0030388: fructose 1,6-bisphosphate metabolic process8.88E-04
45GO:0010024: phytochromobilin biosynthetic process8.88E-04
46GO:0009409: response to cold1.07E-03
47GO:0006415: translational termination1.11E-03
48GO:0006810: transport1.31E-03
49GO:0006000: fructose metabolic process1.44E-03
50GO:0006788: heme oxidation1.44E-03
51GO:0006753: nucleoside phosphate metabolic process1.44E-03
52GO:0071492: cellular response to UV-A1.44E-03
53GO:0090506: axillary shoot meristem initiation1.44E-03
54GO:0010207: photosystem II assembly1.62E-03
55GO:0019253: reductive pentose-phosphate cycle1.62E-03
56GO:0006636: unsaturated fatty acid biosynthetic process2.03E-03
57GO:0009800: cinnamic acid biosynthetic process2.08E-03
58GO:0009650: UV protection2.08E-03
59GO:0006241: CTP biosynthetic process2.08E-03
60GO:0010731: protein glutathionylation2.08E-03
61GO:0006165: nucleoside diphosphate phosphorylation2.08E-03
62GO:0006228: UTP biosynthetic process2.08E-03
63GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.08E-03
64GO:0007231: osmosensory signaling pathway2.08E-03
65GO:0009152: purine ribonucleotide biosynthetic process2.08E-03
66GO:0046653: tetrahydrofolate metabolic process2.08E-03
67GO:0000027: ribosomal large subunit assembly2.25E-03
68GO:0009768: photosynthesis, light harvesting in photosystem I2.48E-03
69GO:0061077: chaperone-mediated protein folding2.73E-03
70GO:0006412: translation2.80E-03
71GO:0006183: GTP biosynthetic process2.80E-03
72GO:0045727: positive regulation of translation2.80E-03
73GO:0015994: chlorophyll metabolic process2.80E-03
74GO:0033500: carbohydrate homeostasis2.80E-03
75GO:0048629: trichome patterning2.80E-03
76GO:0071486: cellular response to high light intensity2.80E-03
77GO:0009644: response to high light intensity3.22E-03
78GO:0006869: lipid transport3.22E-03
79GO:0080110: sporopollenin biosynthetic process3.59E-03
80GO:0046785: microtubule polymerization3.59E-03
81GO:0006656: phosphatidylcholine biosynthetic process3.59E-03
82GO:0006564: L-serine biosynthetic process3.59E-03
83GO:0045038: protein import into chloroplast thylakoid membrane3.59E-03
84GO:0031365: N-terminal protein amino acid modification3.59E-03
85GO:0006461: protein complex assembly3.59E-03
86GO:0000413: protein peptidyl-prolyl isomerization4.15E-03
87GO:0010087: phloem or xylem histogenesis4.15E-03
88GO:0009913: epidermal cell differentiation4.44E-03
89GO:0016554: cytidine to uridine editing4.44E-03
90GO:0006596: polyamine biosynthetic process4.44E-03
91GO:0006559: L-phenylalanine catabolic process4.44E-03
92GO:0006561: proline biosynthetic process4.44E-03
93GO:0048759: xylem vessel member cell differentiation4.44E-03
94GO:0048827: phyllome development4.44E-03
95GO:0042549: photosystem II stabilization4.44E-03
96GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.44E-03
97GO:0071555: cell wall organization4.46E-03
98GO:0010182: sugar mediated signaling pathway4.47E-03
99GO:0055114: oxidation-reduction process5.08E-03
100GO:0055085: transmembrane transport5.21E-03
101GO:0042372: phylloquinone biosynthetic process5.35E-03
102GO:0010067: procambium histogenesis5.35E-03
103GO:1901259: chloroplast rRNA processing5.35E-03
104GO:0010019: chloroplast-nucleus signaling pathway5.35E-03
105GO:0009955: adaxial/abaxial pattern specification5.35E-03
106GO:0015937: coenzyme A biosynthetic process6.32E-03
107GO:0009645: response to low light intensity stimulus6.32E-03
108GO:0010444: guard mother cell differentiation6.32E-03
109GO:0050829: defense response to Gram-negative bacterium6.32E-03
110GO:0006400: tRNA modification6.32E-03
111GO:0009395: phospholipid catabolic process6.32E-03
112GO:0030091: protein repair7.35E-03
113GO:0008610: lipid biosynthetic process7.35E-03
114GO:0009819: drought recovery7.35E-03
115GO:0006605: protein targeting7.35E-03
116GO:0046620: regulation of organ growth7.35E-03
117GO:0009704: de-etiolation7.35E-03
118GO:0032508: DNA duplex unwinding7.35E-03
119GO:2000070: regulation of response to water deprivation7.35E-03
120GO:0007186: G-protein coupled receptor signaling pathway8.43E-03
121GO:0017004: cytochrome complex assembly8.43E-03
122GO:0006002: fructose 6-phosphate metabolic process8.43E-03
123GO:0015996: chlorophyll catabolic process8.43E-03
124GO:0015995: chlorophyll biosynthetic process9.44E-03
125GO:0010411: xyloglucan metabolic process9.44E-03
126GO:0090305: nucleic acid phosphodiester bond hydrolysis9.58E-03
127GO:0010206: photosystem II repair9.58E-03
128GO:0090333: regulation of stomatal closure9.58E-03
129GO:0000373: Group II intron splicing9.58E-03
130GO:0006779: porphyrin-containing compound biosynthetic process1.08E-02
131GO:1900865: chloroplast RNA modification1.08E-02
132GO:0009416: response to light stimulus1.08E-02
133GO:0010205: photoinhibition1.08E-02
134GO:0000160: phosphorelay signal transduction system1.10E-02
135GO:0006633: fatty acid biosynthetic process1.19E-02
136GO:0006782: protoporphyrinogen IX biosynthetic process1.20E-02
137GO:0009688: abscisic acid biosynthetic process1.20E-02
138GO:0043069: negative regulation of programmed cell death1.20E-02
139GO:0010119: regulation of stomatal movement1.21E-02
140GO:0019684: photosynthesis, light reaction1.33E-02
141GO:0006816: calcium ion transport1.33E-02
142GO:0009089: lysine biosynthetic process via diaminopimelate1.33E-02
143GO:0009073: aromatic amino acid family biosynthetic process1.33E-02
144GO:0043085: positive regulation of catalytic activity1.33E-02
145GO:0009750: response to fructose1.33E-02
146GO:0000038: very long-chain fatty acid metabolic process1.33E-02
147GO:0032259: methylation1.35E-02
148GO:0016042: lipid catabolic process1.38E-02
149GO:0034599: cellular response to oxidative stress1.39E-02
150GO:0045037: protein import into chloroplast stroma1.47E-02
151GO:0006839: mitochondrial transport1.52E-02
152GO:0010628: positive regulation of gene expression1.61E-02
153GO:0006006: glucose metabolic process1.61E-02
154GO:0010229: inflorescence development1.61E-02
155GO:0006094: gluconeogenesis1.61E-02
156GO:0005986: sucrose biosynthetic process1.61E-02
157GO:0009926: auxin polar transport1.72E-02
158GO:0010143: cutin biosynthetic process1.75E-02
159GO:0010223: secondary shoot formation1.75E-02
160GO:0010540: basipetal auxin transport1.75E-02
161GO:0042546: cell wall biogenesis1.79E-02
162GO:0005985: sucrose metabolic process1.90E-02
163GO:0070588: calcium ion transmembrane transport1.90E-02
164GO:0009225: nucleotide-sugar metabolic process1.90E-02
165GO:0006833: water transport2.05E-02
166GO:0019762: glucosinolate catabolic process2.05E-02
167GO:0080147: root hair cell development2.21E-02
168GO:0006487: protein N-linked glycosylation2.21E-02
169GO:0009736: cytokinin-activated signaling pathway2.32E-02
170GO:0007017: microtubule-based process2.37E-02
171GO:0031408: oxylipin biosynthetic process2.53E-02
172GO:0016998: cell wall macromolecule catabolic process2.53E-02
173GO:0016226: iron-sulfur cluster assembly2.70E-02
174GO:0019748: secondary metabolic process2.70E-02
175GO:0030245: cellulose catabolic process2.70E-02
176GO:0009411: response to UV2.87E-02
177GO:0001944: vasculature development2.87E-02
178GO:0042127: regulation of cell proliferation3.05E-02
179GO:0009306: protein secretion3.05E-02
180GO:0010089: xylem development3.05E-02
181GO:0010584: pollen exine formation3.05E-02
182GO:0080167: response to karrikin3.06E-02
183GO:0034220: ion transmembrane transport3.41E-02
184GO:0042742: defense response to bacterium3.57E-02
185GO:0006662: glycerol ether metabolic process3.60E-02
186GO:0048544: recognition of pollen3.79E-02
187GO:0045454: cell redox homeostasis3.82E-02
188GO:0048825: cotyledon development3.99E-02
189GO:0000302: response to reactive oxygen species4.18E-02
190GO:0002229: defense response to oomycetes4.18E-02
191GO:0010090: trichome morphogenesis4.59E-02
192GO:1901657: glycosyl compound metabolic process4.59E-02
193GO:0019760: glucosinolate metabolic process4.79E-02
RankGO TermAdjusted P value
1GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
2GO:0046577: long-chain-alcohol oxidase activity0.00E+00
3GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
4GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
5GO:0010301: xanthoxin dehydrogenase activity0.00E+00
6GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
7GO:0010487: thermospermine synthase activity0.00E+00
8GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
9GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
10GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
11GO:0051738: xanthophyll binding0.00E+00
12GO:0019843: rRNA binding2.04E-08
13GO:0005528: FK506 binding2.83E-07
14GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.94E-07
15GO:0016168: chlorophyll binding4.82E-07
16GO:0022891: substrate-specific transmembrane transporter activity2.35E-05
17GO:0016149: translation release factor activity, codon specific5.66E-05
18GO:0001872: (1->3)-beta-D-glucan binding5.66E-05
19GO:0003735: structural constituent of ribosome1.16E-04
20GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.97E-04
21GO:0051920: peroxiredoxin activity2.97E-04
22GO:0016788: hydrolase activity, acting on ester bonds3.17E-04
23GO:0010945: CoA pyrophosphatase activity4.10E-04
24GO:0080132: fatty acid alpha-hydroxylase activity4.10E-04
25GO:0016768: spermine synthase activity4.10E-04
26GO:0030794: (S)-coclaurine-N-methyltransferase activity4.10E-04
27GO:0004033: aldo-keto reductase (NADP) activity4.80E-04
28GO:0016209: antioxidant activity4.80E-04
29GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.86E-04
30GO:0003747: translation release factor activity7.02E-04
31GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.88E-04
32GO:0016630: protochlorophyllide reductase activity8.88E-04
33GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.88E-04
34GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity8.88E-04
35GO:0000234: phosphoethanolamine N-methyltransferase activity8.88E-04
36GO:0008967: phosphoglycolate phosphatase activity8.88E-04
37GO:0047746: chlorophyllase activity8.88E-04
38GO:0042389: omega-3 fatty acid desaturase activity8.88E-04
39GO:0004617: phosphoglycerate dehydrogenase activity8.88E-04
40GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity8.88E-04
41GO:0016491: oxidoreductase activity9.92E-04
42GO:0050734: hydroxycinnamoyltransferase activity1.44E-03
43GO:0045548: phenylalanine ammonia-lyase activity1.44E-03
44GO:0045174: glutathione dehydrogenase (ascorbate) activity1.44E-03
45GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.44E-03
46GO:0070402: NADPH binding1.44E-03
47GO:0004089: carbonate dehydratase activity1.44E-03
48GO:0008864: formyltetrahydrofolate deformylase activity1.44E-03
49GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.44E-03
50GO:0031409: pigment binding2.03E-03
51GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity2.08E-03
52GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.08E-03
53GO:0004550: nucleoside diphosphate kinase activity2.08E-03
54GO:0052689: carboxylic ester hydrolase activity2.37E-03
55GO:1990137: plant seed peroxidase activity2.80E-03
56GO:0050378: UDP-glucuronate 4-epimerase activity2.80E-03
57GO:0043495: protein anchor2.80E-03
58GO:0004392: heme oxygenase (decyclizing) activity2.80E-03
59GO:0004659: prenyltransferase activity2.80E-03
60GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.80E-03
61GO:0003959: NADPH dehydrogenase activity3.59E-03
62GO:0005509: calcium ion binding3.75E-03
63GO:0000210: NAD+ diphosphatase activity4.44E-03
64GO:0016208: AMP binding4.44E-03
65GO:0004130: cytochrome-c peroxidase activity4.44E-03
66GO:0016688: L-ascorbate peroxidase activity4.44E-03
67GO:0008200: ion channel inhibitor activity4.44E-03
68GO:0009055: electron carrier activity4.47E-03
69GO:0050662: coenzyme binding4.81E-03
70GO:0051753: mannan synthase activity5.35E-03
71GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.35E-03
72GO:0016762: xyloglucan:xyloglucosyl transferase activity5.53E-03
73GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.63E-03
74GO:0000156: phosphorelay response regulator activity6.30E-03
75GO:0019899: enzyme binding6.32E-03
76GO:0008235: metalloexopeptidase activity6.32E-03
77GO:0008289: lipid binding7.06E-03
78GO:0030247: polysaccharide binding9.44E-03
79GO:0016798: hydrolase activity, acting on glycosyl bonds9.44E-03
80GO:0004222: metalloendopeptidase activity1.16E-02
81GO:0030234: enzyme regulator activity1.20E-02
82GO:0008047: enzyme activator activity1.20E-02
83GO:0015386: potassium:proton antiporter activity1.33E-02
84GO:0004177: aminopeptidase activity1.33E-02
85GO:0004565: beta-galactosidase activity1.61E-02
86GO:0004022: alcohol dehydrogenase (NAD) activity1.61E-02
87GO:0031072: heat shock protein binding1.61E-02
88GO:0005262: calcium channel activity1.61E-02
89GO:0004364: glutathione transferase activity1.65E-02
90GO:0008266: poly(U) RNA binding1.75E-02
91GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.05E-02
92GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.05E-02
93GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.05E-02
94GO:0051287: NAD binding2.08E-02
95GO:0051536: iron-sulfur cluster binding2.21E-02
96GO:0004857: enzyme inhibitor activity2.21E-02
97GO:0008168: methyltransferase activity2.23E-02
98GO:0043424: protein histidine kinase binding2.37E-02
99GO:0015079: potassium ion transmembrane transporter activity2.37E-02
100GO:0033612: receptor serine/threonine kinase binding2.53E-02
101GO:0008810: cellulase activity2.87E-02
102GO:0008514: organic anion transmembrane transporter activity3.05E-02
103GO:0030599: pectinesterase activity3.11E-02
104GO:0047134: protein-disulfide reductase activity3.23E-02
105GO:0005102: receptor binding3.23E-02
106GO:0001085: RNA polymerase II transcription factor binding3.60E-02
107GO:0004791: thioredoxin-disulfide reductase activity3.79E-02
108GO:0004871: signal transducer activity4.05E-02
109GO:0003824: catalytic activity4.16E-02
110GO:0048038: quinone binding4.18E-02
111GO:0004518: nuclease activity4.38E-02
112GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.59E-02
113GO:0016759: cellulose synthase activity4.79E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009507: chloroplast1.98E-48
3GO:0009535: chloroplast thylakoid membrane1.83E-34
4GO:0009570: chloroplast stroma1.37E-20
5GO:0009543: chloroplast thylakoid lumen6.72E-20
6GO:0009941: chloroplast envelope6.73E-19
7GO:0009579: thylakoid8.77E-17
8GO:0009534: chloroplast thylakoid1.48E-15
9GO:0031977: thylakoid lumen2.38E-10
10GO:0048046: apoplast3.85E-07
11GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.45E-07
12GO:0009523: photosystem II2.95E-06
13GO:0009654: photosystem II oxygen evolving complex1.32E-05
14GO:0046658: anchored component of plasma membrane3.26E-05
15GO:0019898: extrinsic component of membrane5.94E-05
16GO:0031969: chloroplast membrane9.40E-05
17GO:0010319: stromule1.09E-04
18GO:0030095: chloroplast photosystem II1.31E-04
19GO:0005840: ribosome1.59E-04
20GO:0009533: chloroplast stromal thylakoid3.84E-04
21GO:0009782: photosystem I antenna complex4.10E-04
22GO:0031225: anchored component of membrane7.98E-04
23GO:0042170: plastid membrane8.88E-04
24GO:0009528: plastid inner membrane1.44E-03
25GO:0010287: plastoglobule1.66E-03
26GO:0030076: light-harvesting complex1.82E-03
27GO:0015934: large ribosomal subunit1.87E-03
28GO:0015630: microtubule cytoskeleton2.08E-03
29GO:0042651: thylakoid membrane2.48E-03
30GO:0009517: PSII associated light-harvesting complex II2.80E-03
31GO:0009527: plastid outer membrane2.80E-03
32GO:0005618: cell wall2.93E-03
33GO:0016021: integral component of membrane3.59E-03
34GO:0005778: peroxisomal membrane7.12E-03
35GO:0005811: lipid particle8.43E-03
36GO:0005763: mitochondrial small ribosomal subunit9.58E-03
37GO:0055028: cortical microtubule1.20E-02
38GO:0000311: plastid large ribosomal subunit1.47E-02
39GO:0032040: small-subunit processome1.47E-02
40GO:0016020: membrane1.60E-02
41GO:0000312: plastid small ribosomal subunit1.75E-02
42GO:0009505: plant-type cell wall1.99E-02
43GO:0005758: mitochondrial intermembrane space2.21E-02
44GO:0009532: plastid stroma2.53E-02
45GO:0009706: chloroplast inner membrane3.31E-02
46GO:0005770: late endosome3.60E-02
47GO:0009522: photosystem I3.79E-02
48GO:0032580: Golgi cisterna membrane4.79E-02
49GO:0009536: plastid4.97E-02
Gene type



Gene DE type