co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0080056: petal vascular tissue pattern formation	0.00E+00
3	GO:0006105: succinate metabolic process	0.00E+00
4	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
5	GO:0019484: beta-alanine catabolic process	0.00E+00
6	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
7	GO:0010398: xylogalacturonan metabolic process	0.00E+00
8	GO:0006102: isocitrate metabolic process	3.30E-05
9	GO:0035266: meristem growth	7.07E-05
10	GO:0009450: gamma-aminobutyric acid catabolic process	7.07E-05
11	GO:0007292: female gamete generation	7.07E-05
12	GO:1990641: response to iron ion starvation	7.07E-05
13	GO:0019673: GDP-mannose metabolic process	7.07E-05
14	GO:0009865: pollen tube adhesion	7.07E-05
15	GO:0006540: glutamate decarboxylation to succinate	7.07E-05
16	GO:0006099: tricarboxylic acid cycle	8.73E-05
17	GO:0006468: protein phosphorylation	1.16E-04
18	GO:0009225: nucleotide-sugar metabolic process	1.59E-04
19	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	1.70E-04
20	GO:0010033: response to organic substance	1.70E-04
21	GO:0007584: response to nutrient	1.70E-04
22	GO:0051788: response to misfolded protein	1.70E-04
23	GO:0006101: citrate metabolic process	1.70E-04
24	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.70E-04
25	GO:0034398: telomere tethering at nuclear periphery	1.70E-04
26	GO:0000162: tryptophan biosynthetic process	1.79E-04
27	GO:0046686: response to cadmium ion	2.10E-04
28	GO:0048367: shoot system development	2.39E-04
29	GO:0042256: mature ribosome assembly	2.86E-04
30	GO:0060968: regulation of gene silencing	2.86E-04
31	GO:0006954: inflammatory response	2.86E-04
32	GO:1902626: assembly of large subunit precursor of preribosome	2.86E-04
33	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	2.86E-04
34	GO:0071215: cellular response to abscisic acid stimulus	2.95E-04
35	GO:0019438: aromatic compound biosynthetic process	4.15E-04
36	GO:0006020: inositol metabolic process	4.15E-04
37	GO:0009399: nitrogen fixation	4.15E-04
38	GO:0009113: purine nucleobase biosynthetic process	4.15E-04
39	GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	4.15E-04
40	GO:0006542: glutamine biosynthetic process	5.53E-04
41	GO:0033320: UDP-D-xylose biosynthetic process	5.53E-04
42	GO:1902584: positive regulation of response to water deprivation	5.53E-04
43	GO:0006536: glutamate metabolic process	5.53E-04
44	GO:0042273: ribosomal large subunit biogenesis	5.53E-04
45	GO:0010600: regulation of auxin biosynthetic process	5.53E-04
46	GO:0000460: maturation of 5.8S rRNA	5.53E-04
47	GO:0010107: potassium ion import	5.53E-04
48	GO:0007029: endoplasmic reticulum organization	7.00E-04
49	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	7.00E-04
50	GO:0006090: pyruvate metabolic process	7.00E-04
51	GO:0048827: phyllome development	8.57E-04
52	GO:0016070: RNA metabolic process	8.57E-04
53	GO:0048232: male gamete generation	8.57E-04
54	GO:0000470: maturation of LSU-rRNA	8.57E-04
55	GO:0043248: proteasome assembly	8.57E-04
56	GO:0042732: D-xylose metabolic process	8.57E-04
57	GO:0006014: D-ribose metabolic process	8.57E-04
58	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.57E-04
59	GO:0010311: lateral root formation	9.62E-04
60	GO:0000054: ribosomal subunit export from nucleus	1.02E-03
61	GO:0045087: innate immune response	1.15E-03
62	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.19E-03
63	GO:0009396: folic acid-containing compound biosynthetic process	1.19E-03
64	GO:0010078: maintenance of root meristem identity	1.37E-03
65	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.38E-03
66	GO:0009051: pentose-phosphate shunt, oxidative branch	1.76E-03
67	GO:0035999: tetrahydrofolate interconversion	1.97E-03
68	GO:0048829: root cap development	2.19E-03
69	GO:0007064: mitotic sister chromatid cohesion	2.19E-03
70	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.19E-03
71	GO:0048364: root development	2.28E-03
72	GO:0030148: sphingolipid biosynthetic process	2.41E-03
73	GO:0010015: root morphogenesis	2.41E-03
74	GO:0071365: cellular response to auxin stimulus	2.64E-03
75	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.64E-03
76	GO:0010588: cotyledon vascular tissue pattern formation	2.88E-03
77	GO:2000012: regulation of auxin polar transport	2.88E-03
78	GO:0006807: nitrogen compound metabolic process	2.88E-03
79	GO:0006108: malate metabolic process	2.88E-03
80	GO:0006541: glutamine metabolic process	3.12E-03
81	GO:0009933: meristem structural organization	3.12E-03
82	GO:0009969: xyloglucan biosynthetic process	3.37E-03
83	GO:0005985: sucrose metabolic process	3.37E-03
84	GO:0090351: seedling development	3.37E-03
85	GO:0080147: root hair cell development	3.89E-03
86	GO:0006406: mRNA export from nucleus	3.89E-03
87	GO:0051260: protein homooligomerization	4.44E-03
88	GO:0031408: oxylipin biosynthetic process	4.44E-03
89	GO:0071456: cellular response to hypoxia	4.73E-03
90	GO:0035428: hexose transmembrane transport	4.73E-03
91	GO:0016226: iron-sulfur cluster assembly	4.73E-03
92	GO:0030433: ubiquitin-dependent ERAD pathway	4.73E-03
93	GO:0010150: leaf senescence	4.76E-03
94	GO:0006012: galactose metabolic process	5.02E-03
95	GO:0051028: mRNA transport	5.62E-03
96	GO:0010118: stomatal movement	5.93E-03
97	GO:0006606: protein import into nucleus	5.93E-03
98	GO:0042391: regulation of membrane potential	5.93E-03
99	GO:0046323: glucose import	6.24E-03
100	GO:0045489: pectin biosynthetic process	6.24E-03
101	GO:0010154: fruit development	6.24E-03
102	GO:0010305: leaf vascular tissue pattern formation	6.24E-03
103	GO:0006885: regulation of pH	6.24E-03
104	GO:0006520: cellular amino acid metabolic process	6.24E-03
105	GO:0009646: response to absence of light	6.56E-03
106	GO:0048544: recognition of pollen	6.56E-03
107	GO:0009851: auxin biosynthetic process	6.89E-03
108	GO:0010183: pollen tube guidance	6.89E-03
109	GO:0019252: starch biosynthetic process	6.89E-03
110	GO:0032502: developmental process	7.56E-03
111	GO:0010583: response to cyclopentenone	7.56E-03
112	GO:0009723: response to ethylene	8.51E-03
113	GO:0051607: defense response to virus	8.97E-03
114	GO:0001666: response to hypoxia	9.34E-03
115	GO:0042128: nitrate assimilation	1.01E-02
116	GO:0008219: cell death	1.13E-02
117	GO:0006499: N-terminal protein myristoylation	1.21E-02
118	GO:0009910: negative regulation of flower development	1.25E-02
119	GO:0009631: cold acclimation	1.25E-02
120	GO:0009733: response to auxin	1.26E-02
121	GO:0006397: mRNA processing	1.41E-02
122	GO:0051707: response to other organism	1.59E-02
123	GO:0009965: leaf morphogenesis	1.73E-02
124	GO:0031347: regulation of defense response	1.82E-02
125	GO:0005975: carbohydrate metabolic process	1.85E-02
126	GO:0042538: hyperosmotic salinity response	1.87E-02
127	GO:0006812: cation transport	1.87E-02
128	GO:0006364: rRNA processing	1.97E-02
129	GO:0006813: potassium ion transport	1.97E-02
130	GO:0006857: oligopeptide transport	2.06E-02
131	GO:0009626: plant-type hypersensitive response	2.32E-02
132	GO:0009611: response to wounding	2.46E-02
133	GO:0035556: intracellular signal transduction	2.54E-02
134	GO:0018105: peptidyl-serine phosphorylation	2.58E-02
135	GO:0006413: translational initiation	3.55E-02
136	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.04E-02
137	GO:0010468: regulation of gene expression	4.23E-02
138	GO:0009617: response to bacterium	4.23E-02
139	GO:0009414: response to water deprivation	4.72E-02
140	GO:0071555: cell wall organization	4.84E-02
141	GO:0009651: response to salt stress	4.95E-02
142	GO:0009826: unidimensional cell growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0005524: ATP binding	4.04E-05
4	GO:0008446: GDP-mannose 4,6-dehydratase activity	7.07E-05
5	GO:0003867: 4-aminobutyrate transaminase activity	7.07E-05
6	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	7.07E-05
7	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	1.70E-04
8	GO:0003994: aconitate hydratase activity	1.70E-04
9	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.70E-04
10	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.70E-04
11	GO:0004352: glutamate dehydrogenase (NAD+) activity	1.70E-04
12	GO:0045140: inositol phosphoceramide synthase activity	1.70E-04
13	GO:0004329: formate-tetrahydrofolate ligase activity	1.70E-04
14	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	2.86E-04
15	GO:0004049: anthranilate synthase activity	2.86E-04
16	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.86E-04
17	GO:0004383: guanylate cyclase activity	2.86E-04
18	GO:0043023: ribosomal large subunit binding	4.15E-04
19	GO:0001653: peptide receptor activity	4.15E-04
20	GO:0048027: mRNA 5'-UTR binding	4.15E-04
21	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.15E-04
22	GO:0000339: RNA cap binding	4.15E-04
23	GO:0004834: tryptophan synthase activity	5.53E-04
24	GO:0004737: pyruvate decarboxylase activity	5.53E-04
25	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.53E-04
26	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.53E-04
27	GO:0004470: malic enzyme activity	5.53E-04
28	GO:0050378: UDP-glucuronate 4-epimerase activity	5.53E-04
29	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	5.53E-04
30	GO:0004356: glutamate-ammonia ligase activity	7.00E-04
31	GO:0008948: oxaloacetate decarboxylase activity	7.00E-04
32	GO:0030976: thiamine pyrophosphate binding	8.57E-04
33	GO:0048040: UDP-glucuronate decarboxylase activity	8.57E-04
34	GO:0035252: UDP-xylosyltransferase activity	8.57E-04
35	GO:0036402: proteasome-activating ATPase activity	8.57E-04
36	GO:0070403: NAD+ binding	1.02E-03
37	GO:0004747: ribokinase activity	1.02E-03
38	GO:0050897: cobalt ion binding	1.05E-03
39	GO:0016831: carboxy-lyase activity	1.19E-03
40	GO:0008143: poly(A) binding	1.19E-03
41	GO:0004620: phospholipase activity	1.19E-03
42	GO:0051539: 4 iron, 4 sulfur cluster binding	1.30E-03
43	GO:0005507: copper ion binding	1.35E-03
44	GO:0015288: porin activity	1.37E-03
45	GO:0004034: aldose 1-epimerase activity	1.37E-03
46	GO:0008865: fructokinase activity	1.37E-03
47	GO:0043022: ribosome binding	1.37E-03
48	GO:0017056: structural constituent of nuclear pore	1.37E-03
49	GO:0005267: potassium channel activity	1.56E-03
50	GO:0005487: nucleocytoplasmic transporter activity	1.97E-03
51	GO:0004674: protein serine/threonine kinase activity	2.15E-03
52	GO:0008171: O-methyltransferase activity	2.19E-03
53	GO:0004713: protein tyrosine kinase activity	2.19E-03
54	GO:0047372: acylglycerol lipase activity	2.41E-03
55	GO:0008139: nuclear localization sequence binding	2.88E-03
56	GO:0016301: kinase activity	2.98E-03
57	GO:0030552: cAMP binding	3.37E-03
58	GO:0030553: cGMP binding	3.37E-03
59	GO:0017025: TBP-class protein binding	3.37E-03
60	GO:0051536: iron-sulfur cluster binding	3.89E-03
61	GO:0004672: protein kinase activity	4.12E-03
62	GO:0015144: carbohydrate transmembrane transporter activity	4.14E-03
63	GO:0043424: protein histidine kinase binding	4.17E-03
64	GO:0005216: ion channel activity	4.17E-03
65	GO:0005351: sugar:proton symporter activity	4.66E-03
66	GO:0005249: voltage-gated potassium channel activity	5.93E-03
67	GO:0030551: cyclic nucleotide binding	5.93E-03
68	GO:0005451: monovalent cation:proton antiporter activity	5.93E-03
69	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.05E-03
70	GO:0030246: carbohydrate binding	6.49E-03
71	GO:0016853: isomerase activity	6.56E-03
72	GO:0015299: solute:proton antiporter activity	6.56E-03
73	GO:0010181: FMN binding	6.56E-03
74	GO:0005355: glucose transmembrane transporter activity	6.56E-03
75	GO:0050662: coenzyme binding	6.56E-03
76	GO:0015385: sodium:proton antiporter activity	7.90E-03
77	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.01E-02
78	GO:0004683: calmodulin-dependent protein kinase activity	1.05E-02
79	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.09E-02
80	GO:0003824: catalytic activity	1.23E-02
81	GO:0008422: beta-glucosidase activity	1.41E-02
82	GO:0003729: mRNA binding	1.81E-02
83	GO:0051287: NAD binding	1.82E-02
84	GO:0016298: lipase activity	2.01E-02
85	GO:0016887: ATPase activity	2.10E-02
86	GO:0015171: amino acid transmembrane transporter activity	2.11E-02
87	GO:0045735: nutrient reservoir activity	2.21E-02
88	GO:0000166: nucleotide binding	2.40E-02
89	GO:0016746: transferase activity, transferring acyl groups	2.58E-02
90	GO:0030170: pyridoxal phosphate binding	3.19E-02
91	GO:0005516: calmodulin binding	3.61E-02
92	GO:0003743: translation initiation factor activity	4.16E-02
93	GO:0008270: zinc ion binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.64E-05
2	GO:0030687: preribosome, large subunit precursor	2.51E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	7.07E-05
4	GO:0005950: anthranilate synthase complex	1.70E-04
5	GO:0005829: cytosol	2.62E-04
6	GO:0005774: vacuolar membrane	2.63E-04
7	GO:0044614: nuclear pore cytoplasmic filaments	2.86E-04
8	GO:0005802: trans-Golgi network	3.04E-04
9	GO:0016020: membrane	5.07E-04
10	GO:0032580: Golgi cisterna membrane	6.02E-04
11	GO:0031597: cytosolic proteasome complex	1.02E-03
12	GO:0031595: nuclear proteasome complex	1.19E-03
13	GO:0005794: Golgi apparatus	1.19E-03
14	GO:0010494: cytoplasmic stress granule	1.76E-03
15	GO:0005768: endosome	1.96E-03
16	GO:0016604: nuclear body	1.97E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	1.97E-03
18	GO:0016021: integral component of membrane	4.30E-03
19	GO:0031965: nuclear membrane	6.89E-03
20	GO:0000932: P-body	9.34E-03
21	GO:0009506: plasmodesma	1.49E-02
22	GO:0048046: apoplast	1.62E-02
23	GO:0005618: cell wall	1.84E-02
24	GO:0000502: proteasome complex	1.97E-02
25	GO:0005635: nuclear envelope	2.06E-02
26	GO:0005732: small nucleolar ribonucleoprotein complex	2.69E-02
27	GO:0005777: peroxisome	2.76E-02
28	GO:0005773: vacuole	2.84E-02
29	GO:0009705: plant-type vacuole membrane	3.73E-02
30	GO:0005783: endoplasmic reticulum	4.23E-02