Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071311: cellular response to acetate0.00E+00
2GO:0051928: positive regulation of calcium ion transport0.00E+00
3GO:0071260: cellular response to mechanical stimulus0.00E+00
4GO:1904962: plastid to vacuole vesicle-mediated transport0.00E+00
5GO:0042906: xanthine transport0.00E+00
6GO:0009877: nodulation0.00E+00
7GO:0071211: protein targeting to vacuole involved in autophagy0.00E+00
8GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
9GO:0030644: cellular chloride ion homeostasis0.00E+00
10GO:0043171: peptide catabolic process0.00E+00
11GO:0010219: regulation of vernalization response0.00E+00
12GO:0010378: temperature compensation of the circadian clock0.00E+00
13GO:0005997: xylulose metabolic process0.00E+00
14GO:0009409: response to cold1.32E-06
15GO:0009737: response to abscisic acid6.08E-05
16GO:0010600: regulation of auxin biosynthetic process7.72E-05
17GO:0009817: defense response to fungus, incompatible interaction1.45E-04
18GO:0035556: intracellular signal transduction1.61E-04
19GO:0010244: response to low fluence blue light stimulus by blue low-fluence system2.36E-04
20GO:0009414: response to water deprivation2.37E-04
21GO:0009645: response to low light intensity stimulus3.06E-04
22GO:1900060: negative regulation of ceramide biosynthetic process3.52E-04
23GO:1990641: response to iron ion starvation3.52E-04
24GO:0010362: negative regulation of anion channel activity by blue light3.52E-04
25GO:0080173: male-female gamete recognition during double fertilization3.52E-04
26GO:1902265: abscisic acid homeostasis3.52E-04
27GO:0015812: gamma-aminobutyric acid transport3.52E-04
28GO:0032958: inositol phosphate biosynthetic process3.52E-04
29GO:0006369: termination of RNA polymerase II transcription3.52E-04
30GO:0010928: regulation of auxin mediated signaling pathway3.84E-04
31GO:0009415: response to water3.84E-04
32GO:0007623: circadian rhythm4.20E-04
33GO:0009416: response to light stimulus5.75E-04
34GO:0010286: heat acclimation7.28E-04
35GO:0015720: allantoin transport7.67E-04
36GO:0010155: regulation of proton transport7.67E-04
37GO:0006883: cellular sodium ion homeostasis7.67E-04
38GO:0048833: specification of floral organ number7.67E-04
39GO:0015857: uracil transport7.67E-04
40GO:1902884: positive regulation of response to oxidative stress7.67E-04
41GO:0006101: citrate metabolic process7.67E-04
42GO:0051170: nuclear import7.67E-04
43GO:0030003: cellular cation homeostasis7.67E-04
44GO:0090156: cellular sphingolipid homeostasis7.67E-04
45GO:0009641: shade avoidance7.77E-04
46GO:0006816: calcium ion transport8.95E-04
47GO:0048573: photoperiodism, flowering1.03E-03
48GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.16E-03
49GO:2000012: regulation of auxin polar transport1.16E-03
50GO:0018298: protein-chromophore linkage1.17E-03
51GO:0030029: actin filament-based process1.24E-03
52GO:1902448: positive regulation of shade avoidance1.24E-03
53GO:0042344: indole glucosinolate catabolic process1.24E-03
54GO:0071230: cellular response to amino acid stimulus1.24E-03
55GO:1901562: response to paraquat1.24E-03
56GO:0071705: nitrogen compound transport1.24E-03
57GO:0090630: activation of GTPase activity1.24E-03
58GO:0000160: phosphorelay signal transduction system1.25E-03
59GO:0010218: response to far red light1.32E-03
60GO:0009631: cold acclimation1.40E-03
61GO:0009637: response to blue light1.58E-03
62GO:0034976: response to endoplasmic reticulum stress1.62E-03
63GO:0006020: inositol metabolic process1.79E-03
64GO:0010601: positive regulation of auxin biosynthetic process1.79E-03
65GO:0015749: monosaccharide transport1.79E-03
66GO:1901332: negative regulation of lateral root development1.79E-03
67GO:0006874: cellular calcium ion homeostasis1.98E-03
68GO:0009768: photosynthesis, light harvesting in photosystem I1.98E-03
69GO:0042542: response to hydrogen peroxide2.07E-03
70GO:0048511: rhythmic process2.18E-03
71GO:0009269: response to desiccation2.18E-03
72GO:0009640: photomorphogenesis2.18E-03
73GO:0009651: response to salt stress2.37E-03
74GO:0010017: red or far-red light signaling pathway2.38E-03
75GO:0009687: abscisic acid metabolic process2.40E-03
76GO:0015743: malate transport2.40E-03
77GO:0048442: sepal development2.40E-03
78GO:0009765: photosynthesis, light harvesting2.40E-03
79GO:1901002: positive regulation of response to salt stress2.40E-03
80GO:0022622: root system development2.40E-03
81GO:0006646: phosphatidylethanolamine biosynthetic process2.40E-03
82GO:0009644: response to high light intensity2.41E-03
83GO:0008643: carbohydrate transport2.41E-03
84GO:0048443: stamen development2.82E-03
85GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.06E-03
86GO:0000380: alternative mRNA splicing, via spliceosome3.07E-03
87GO:0048578: positive regulation of long-day photoperiodism, flowering3.07E-03
88GO:0009904: chloroplast accumulation movement3.07E-03
89GO:0043097: pyrimidine nucleoside salvage3.07E-03
90GO:0009585: red, far-red light phototransduction3.19E-03
91GO:0042732: D-xylose metabolic process3.79E-03
92GO:0002238: response to molecule of fungal origin3.79E-03
93GO:0006206: pyrimidine nucleobase metabolic process3.79E-03
94GO:0000741: karyogamy3.79E-03
95GO:0048544: recognition of pollen3.83E-03
96GO:0006814: sodium ion transport3.83E-03
97GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.57E-03
98GO:0006970: response to osmotic stress4.57E-03
99GO:0009903: chloroplast avoidance movement4.57E-03
100GO:0009861: jasmonic acid and ethylene-dependent systemic resistance4.57E-03
101GO:0010161: red light signaling pathway5.40E-03
102GO:0098869: cellular oxidant detoxification5.40E-03
103GO:0009395: phospholipid catabolic process5.40E-03
104GO:0048437: floral organ development5.40E-03
105GO:0006333: chromatin assembly or disassembly5.40E-03
106GO:0010038: response to metal ion5.40E-03
107GO:0010044: response to aluminum ion5.40E-03
108GO:0032880: regulation of protein localization5.40E-03
109GO:0080167: response to karrikin5.66E-03
110GO:0006102: isocitrate metabolic process6.27E-03
111GO:0009061: anaerobic respiration6.27E-03
112GO:0009819: drought recovery6.27E-03
113GO:0010078: maintenance of root meristem identity6.27E-03
114GO:0009704: de-etiolation6.27E-03
115GO:0006491: N-glycan processing6.27E-03
116GO:0010029: regulation of seed germination6.74E-03
117GO:0006972: hyperosmotic response7.19E-03
118GO:0010099: regulation of photomorphogenesis7.19E-03
119GO:0009827: plant-type cell wall modification7.19E-03
120GO:0001510: RNA methylation7.19E-03
121GO:0010345: suberin biosynthetic process8.16E-03
122GO:0006098: pentose-phosphate shunt8.16E-03
123GO:0046916: cellular transition metal ion homeostasis8.16E-03
124GO:0042742: defense response to bacterium8.30E-03
125GO:0009638: phototropism9.17E-03
126GO:0030042: actin filament depolymerization9.17E-03
127GO:0048354: mucilage biosynthetic process involved in seed coat development9.17E-03
128GO:0008202: steroid metabolic process9.17E-03
129GO:0006811: ion transport9.19E-03
130GO:0010043: response to zinc ion9.64E-03
131GO:0055062: phosphate ion homeostasis1.02E-02
132GO:0010162: seed dormancy process1.02E-02
133GO:0007064: mitotic sister chromatid cohesion1.02E-02
134GO:0009970: cellular response to sulfate starvation1.02E-02
135GO:0006995: cellular response to nitrogen starvation1.02E-02
136GO:0048441: petal development1.02E-02
137GO:0009682: induced systemic resistance1.13E-02
138GO:0052544: defense response by callose deposition in cell wall1.13E-02
139GO:0030148: sphingolipid biosynthetic process1.13E-02
140GO:0016925: protein sumoylation1.25E-02
141GO:0010468: regulation of gene expression1.26E-02
142GO:0009718: anthocyanin-containing compound biosynthetic process1.37E-02
143GO:0009785: blue light signaling pathway1.37E-02
144GO:0010114: response to red light1.37E-02
145GO:0050826: response to freezing1.37E-02
146GO:0000209: protein polyubiquitination1.42E-02
147GO:0009266: response to temperature stimulus1.49E-02
148GO:0010143: cutin biosynthetic process1.49E-02
149GO:0048440: carpel development1.49E-02
150GO:0007034: vacuolar transport1.49E-02
151GO:0007015: actin filament organization1.49E-02
152GO:0019853: L-ascorbic acid biosynthetic process1.61E-02
153GO:0090351: seedling development1.61E-02
154GO:0010030: positive regulation of seed germination1.61E-02
155GO:0000165: MAPK cascade1.66E-02
156GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.66E-02
157GO:0010025: wax biosynthetic process1.74E-02
158GO:0051603: proteolysis involved in cellular protein catabolic process1.91E-02
159GO:0006857: oligopeptide transport1.98E-02
160GO:0008299: isoprenoid biosynthetic process2.01E-02
161GO:0016575: histone deacetylation2.01E-02
162GO:0009695: jasmonic acid biosynthetic process2.01E-02
163GO:0009909: regulation of flower development2.05E-02
164GO:0010431: seed maturation2.15E-02
165GO:0003333: amino acid transmembrane transport2.15E-02
166GO:0006468: protein phosphorylation2.20E-02
167GO:0019748: secondary metabolic process2.29E-02
168GO:0030433: ubiquitin-dependent ERAD pathway2.29E-02
169GO:0009738: abscisic acid-activated signaling pathway2.30E-02
170GO:0010227: floral organ abscission2.44E-02
171GO:0006012: galactose metabolic process2.44E-02
172GO:0009693: ethylene biosynthetic process2.44E-02
173GO:0071215: cellular response to abscisic acid stimulus2.44E-02
174GO:0006979: response to oxidative stress2.47E-02
175GO:0009553: embryo sac development2.55E-02
176GO:0044550: secondary metabolite biosynthetic process2.55E-02
177GO:0019722: calcium-mediated signaling2.59E-02
178GO:0070417: cellular response to cold2.74E-02
179GO:0008284: positive regulation of cell proliferation2.74E-02
180GO:0016567: protein ubiquitination2.88E-02
181GO:0042631: cellular response to water deprivation2.90E-02
182GO:0080022: primary root development2.90E-02
183GO:0042335: cuticle development2.90E-02
184GO:0034220: ion transmembrane transport2.90E-02
185GO:0010051: xylem and phloem pattern formation2.90E-02
186GO:0045892: negative regulation of transcription, DNA-templated2.94E-02
187GO:0009958: positive gravitropism3.06E-02
188GO:0009960: endosperm development3.06E-02
189GO:0006662: glycerol ether metabolic process3.06E-02
190GO:0010197: polar nucleus fusion3.06E-02
191GO:0010182: sugar mediated signaling pathway3.06E-02
192GO:0046323: glucose import3.06E-02
193GO:0042752: regulation of circadian rhythm3.22E-02
194GO:0007165: signal transduction3.35E-02
195GO:0008654: phospholipid biosynthetic process3.39E-02
196GO:0009556: microsporogenesis3.39E-02
197GO:0055085: transmembrane transport3.43E-02
198GO:0006457: protein folding3.53E-02
199GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.55E-02
200GO:0006635: fatty acid beta-oxidation3.55E-02
201GO:0009408: response to heat3.73E-02
202GO:0006511: ubiquitin-dependent protein catabolic process3.79E-02
203GO:1901657: glycosyl compound metabolic process3.90E-02
204GO:0071281: cellular response to iron ion3.90E-02
205GO:0009567: double fertilization forming a zygote and endosperm4.07E-02
206GO:0019760: glucosinolate metabolic process4.07E-02
207GO:0001666: response to hypoxia4.62E-02
208GO:0009911: positive regulation of flower development4.62E-02
209GO:0010228: vegetative to reproductive phase transition of meristem4.74E-02
210GO:0005975: carbohydrate metabolic process4.84E-02
RankGO TermAdjusted P value
1GO:0047668: amygdalin beta-glucosidase activity0.00E+00
2GO:0019912: cyclin-dependent protein kinase activating kinase activity0.00E+00
3GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
4GO:0005272: sodium channel activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0042907: xanthine transmembrane transporter activity0.00E+00
7GO:0010349: L-galactose dehydrogenase activity0.00E+00
8GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
9GO:0009045: xylose isomerase activity0.00E+00
10GO:0080082: esculin beta-glucosidase activity0.00E+00
11GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
12GO:0015276: ligand-gated ion channel activity0.00E+00
13GO:0004567: beta-mannosidase activity0.00E+00
14GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
15GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
16GO:0005253: anion channel activity7.72E-05
17GO:0009679: hexose:proton symporter activity3.52E-04
18GO:0035671: enone reductase activity3.52E-04
19GO:0000829: inositol heptakisphosphate kinase activity3.52E-04
20GO:0010013: N-1-naphthylphthalamic acid binding3.52E-04
21GO:0080079: cellobiose glucosidase activity3.52E-04
22GO:0008692: 3-hydroxybutyryl-CoA epimerase activity3.52E-04
23GO:0004856: xylulokinase activity3.52E-04
24GO:0046870: cadmium ion binding3.52E-04
25GO:0070006: metalloaminopeptidase activity3.52E-04
26GO:0008066: glutamate receptor activity3.52E-04
27GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.52E-04
28GO:0000828: inositol hexakisphosphate kinase activity3.52E-04
29GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity3.52E-04
30GO:0030275: LRR domain binding3.52E-04
31GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.52E-04
32GO:0000989: transcription factor activity, transcription factor binding5.65E-04
33GO:0016301: kinase activity6.44E-04
34GO:0004609: phosphatidylserine decarboxylase activity7.67E-04
35GO:0047216: inositol 3-alpha-galactosyltransferase activity7.67E-04
36GO:0003994: aconitate hydratase activity7.67E-04
37GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity7.67E-04
38GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.67E-04
39GO:0015180: L-alanine transmembrane transporter activity7.67E-04
40GO:0032791: lead ion binding7.67E-04
41GO:0005274: allantoin uptake transmembrane transporter activity7.67E-04
42GO:0004177: aminopeptidase activity8.95E-04
43GO:0005262: calcium channel activity1.16E-03
44GO:0019948: SUMO activating enzyme activity1.24E-03
45GO:0017150: tRNA dihydrouridine synthase activity1.24E-03
46GO:0004096: catalase activity1.24E-03
47GO:0031624: ubiquitin conjugating enzyme binding1.30E-03
48GO:0004970: ionotropic glutamate receptor activity1.45E-03
49GO:0005217: intracellular ligand-gated ion channel activity1.45E-03
50GO:0031409: pigment binding1.62E-03
51GO:0015144: carbohydrate transmembrane transporter activity1.68E-03
52GO:0004300: enoyl-CoA hydratase activity1.79E-03
53GO:0015189: L-lysine transmembrane transporter activity1.79E-03
54GO:0048027: mRNA 5'-UTR binding1.79E-03
55GO:0030527: structural constituent of chromatin1.79E-03
56GO:0015181: arginine transmembrane transporter activity1.79E-03
57GO:0009882: blue light photoreceptor activity1.79E-03
58GO:0004165: dodecenoyl-CoA delta-isomerase activity1.79E-03
59GO:0004842: ubiquitin-protein transferase activity1.86E-03
60GO:0005351: sugar:proton symporter activity2.02E-03
61GO:0004707: MAP kinase activity2.18E-03
62GO:0019706: protein-cysteine S-palmitoyltransferase activity2.18E-03
63GO:0015210: uracil transmembrane transporter activity2.40E-03
64GO:0005313: L-glutamate transmembrane transporter activity2.40E-03
65GO:0042277: peptide binding2.40E-03
66GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.40E-03
67GO:0003756: protein disulfide isomerase activity2.82E-03
68GO:0010294: abscisic acid glucosyltransferase activity3.07E-03
69GO:0015145: monosaccharide transmembrane transporter activity3.07E-03
70GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.07E-03
71GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.07E-03
72GO:0016773: phosphotransferase activity, alcohol group as acceptor3.07E-03
73GO:0008270: zinc ion binding3.33E-03
74GO:0031625: ubiquitin protein ligase binding3.63E-03
75GO:0005247: voltage-gated chloride channel activity3.79E-03
76GO:0004629: phospholipase C activity3.79E-03
77GO:0019137: thioglucosidase activity3.79E-03
78GO:0000293: ferric-chelate reductase activity3.79E-03
79GO:0005515: protein binding4.11E-03
80GO:0004849: uridine kinase activity4.57E-03
81GO:0004602: glutathione peroxidase activity4.57E-03
82GO:0070300: phosphatidic acid binding4.57E-03
83GO:0004435: phosphatidylinositol phospholipase C activity4.57E-03
84GO:0005261: cation channel activity4.57E-03
85GO:0000156: phosphorelay response regulator activity5.01E-03
86GO:0015140: malate transmembrane transporter activity5.40E-03
87GO:0004672: protein kinase activity6.24E-03
88GO:0004525: ribonuclease III activity6.27E-03
89GO:0004033: aldo-keto reductase (NADP) activity6.27E-03
90GO:0004869: cysteine-type endopeptidase inhibitor activity6.27E-03
91GO:0004674: protein serine/threonine kinase activity6.73E-03
92GO:0016168: chlorophyll binding6.74E-03
93GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen6.89E-03
94GO:0005267: potassium channel activity7.19E-03
95GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)7.19E-03
96GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity7.19E-03
97GO:0001104: RNA polymerase II transcription cofactor activity7.19E-03
98GO:0102483: scopolin beta-glucosidase activity7.51E-03
99GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.16E-03
100GO:0050897: cobalt ion binding9.64E-03
101GO:0047372: acylglycerol lipase activity1.13E-02
102GO:0008422: beta-glucosidase activity1.16E-02
103GO:0000976: transcription regulatory region sequence-specific DNA binding1.25E-02
104GO:0000155: phosphorelay sensor kinase activity1.37E-02
105GO:0008081: phosphoric diester hydrolase activity1.37E-02
106GO:0004565: beta-galactosidase activity1.37E-02
107GO:0005315: inorganic phosphate transmembrane transporter activity1.37E-02
108GO:0008083: growth factor activity1.49E-02
109GO:0003712: transcription cofactor activity1.61E-02
110GO:0004407: histone deacetylase activity1.88E-02
111GO:0004497: monooxygenase activity2.30E-02
112GO:0046872: metal ion binding2.42E-02
113GO:0022891: substrate-specific transmembrane transporter activity2.44E-02
114GO:0061630: ubiquitin protein ligase activity2.45E-02
115GO:0008514: organic anion transmembrane transporter activity2.59E-02
116GO:0047134: protein-disulfide reductase activity2.74E-02
117GO:0005215: transporter activity2.88E-02
118GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.17E-02
119GO:0004791: thioredoxin-disulfide reductase activity3.22E-02
120GO:0010181: FMN binding3.22E-02
121GO:0004197: cysteine-type endopeptidase activity3.72E-02
122GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.90E-02
123GO:0019825: oxygen binding4.05E-02
124GO:0005200: structural constituent of cytoskeleton4.25E-02
125GO:0015297: antiporter activity4.33E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.00E-06
2GO:0009898: cytoplasmic side of plasma membrane7.72E-05
3GO:0000151: ubiquitin ligase complex1.45E-04
4GO:0035339: SPOTS complex3.52E-04
5GO:0005773: vacuole1.44E-03
6GO:0030076: light-harvesting complex1.45E-03
7GO:0005886: plasma membrane1.46E-03
8GO:0000323: lytic vacuole1.79E-03
9GO:0032586: protein storage vacuole membrane2.40E-03
10GO:0005777: peroxisome2.72E-03
11GO:0005829: cytosol2.83E-03
12GO:0034707: chloride channel complex3.79E-03
13GO:0070847: core mediator complex3.79E-03
14GO:0005851: eukaryotic translation initiation factor 2B complex3.79E-03
15GO:0009522: photosystem I3.83E-03
16GO:0000815: ESCRT III complex4.57E-03
17GO:0009986: cell surface5.40E-03
18GO:0010287: plastoglobule6.22E-03
19GO:0000326: protein storage vacuole7.19E-03
20GO:0005783: endoplasmic reticulum7.66E-03
21GO:0010494: cytoplasmic stress granule8.16E-03
22GO:0031090: organelle membrane8.16E-03
23GO:0016020: membrane1.04E-02
24GO:0005764: lysosome1.49E-02
25GO:0030176: integral component of endoplasmic reticulum membrane1.61E-02
26GO:0031966: mitochondrial membrane1.72E-02
27GO:0005622: intracellular1.95E-02
28GO:0015629: actin cytoskeleton2.44E-02
29GO:0005623: cell3.38E-02
30GO:0031965: nuclear membrane3.39E-02
31GO:0009523: photosystem II3.39E-02
32GO:0016592: mediator complex3.72E-02
33GO:0000785: chromatin3.72E-02
34GO:0043231: intracellular membrane-bounded organelle4.21E-02
35GO:0009705: plant-type vacuole membrane4.53E-02
36GO:0000932: P-body4.62E-02
37GO:0005618: cell wall4.87E-02
Gene type



Gene DE type